.mailmap: more updates for Valeria and Yohann

Update .mailmap (#347)

Merge pull request #346 from CEED/jeremy/style-revert

MFEM - revert make style error

MFEM - revert make style error

Improved performance of cuda-gen backend (#341)

Thanks-to: Tim Warburton
Some of these optimizations are the results of the knowledge and experience gathered by Tim Warburton and his team in libPar

Improved performance of cuda-gen backend (#341)

Thanks-to: Tim Warburton
Some of these optimizations are the results of the knowledge and experience gathered by Tim Warburton and his team in libParanumal and then ported to libCEED.

* Add colocated gradient in 3D.

* Treat the qFunction by slice in 3d to avoid using too many registers.

* Minor fix

* Minor fix.

* Minor fix

* Compute the colocated gradient slice by slice.

* Add synchthreads after initialization of the matrices.

* Remove code print.

* Add a critical #pragma unroll

* Fix typo on "collocated".

* Remove dead code.

* Use ColloGrad3d functions.

* Fix cuda-gen backend when collocated gradient is not available.

* make style

* make style

* Add some comments.

* Replace int by CeedInt.

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Update benchmarks/README.md (#345)

Merge pull request #344 from CEED/jeremy/ifort-fix

Fortran - Use preprocessor directive to provide abs path to true qfuntion source
resolves Issue #71

Fortran - Use preprocessor directive to provide abs path to true qfunction source

QFunction - document absolute path requirement (#343)

Make examples consistent (#342)

* Make examples consistent

Symmetric Schur and Simultaneous Diagonalization (#299)

This PR adds simultaneous diagonalization and reorders the t3* tests.

* Interface: add Schur Decomp and interface for Simultaneous Diagonal

Symmetric Schur and Simultaneous Diagonalization (#299)

This PR adds simultaneous diagonalization and reorders the t3* tests.

* Interface: add Schur Decomp and interface for Simultaneous Diagonalization, implement Schur Decomp

* Tests: add Symmetric Schur Fortran test

* Interface: implement Simult Diag

* Tighten Givens tolerance in symmetric Schur

* Tests: Reorder t3* tests

* Basis - Check bounds for symmetric Schur

* Simult Diag - Add LAPACK function reference

* Typo fix

* Basis - 'static' CeedMatrixMultiply

* Merge - fix small issues

* Basis - typo fix

* Basis - Documentation fixes

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QFunction Create by Name (#311)

This PR adds a QFunction gallery to libCEED with 1D, 2D, and 3D mass and Poisson operators.

Closes issue #37, issue #340

* Add QFunction gallery, rename focca

QFunction Create by Name (#311)

This PR adds a QFunction gallery to libCEED with 1D, 2D, and 3D mass and Poisson operators.

Closes issue #37, issue #340

* Add QFunction gallery, rename focca

* Gallery - add initial QFunctions

* Add a test for using the QF gallery

* Modify ex1 to use gallery

* Add multiple test configs to tap

* Move output to test directory

* Update junit

* Add OCCA galley exception

* Add ex2

* Update ex2 for dim->ncompx

* Gallery - modify to work for CUDA as is

* Update Documentation

* Gallery - typo fix

* Gallery - convention change, postappend qfunction family variant

* Gallery - update template with new name checking convention

* Gallery - condense diff3DBuild QFunction

* Gallery - rename diff -> poisson

* Gallery - clarify poisson3DBuild comment

* Gallery - use Pragma SIMD, store Qdata in Voigt convention

* Examples - Convert BP3-6 to Voigt convention

* Examples - add cl option to switch between header and gallery qfs in CEED examples

* Examples - clean up construction of QF name

* Gallery - Switch to PascalCase for gallery names

* Doc - fix function type page

* Interface - Make sure strncpy result is null terminated

* Gallery - Update Poisson 2/3D Apply to new QF body

* make style

* make style - fix worst style problems

* make style - add gallery to make style

* Doc - update documentation errors and inconsistencies

* Examples - test ex1 ex2 with and without gallary

* Examples - reduce testing of ex1/ex2 without gallery, clean up non-gallery qfunctions

* MFEM - revert another make style mistake

* Manual make style updates

* Doc - update function documentation page

* Style updates, document test numbering conventions

* doc: resolve ambiguous image location warning, allow more Dot nodes

* Tests - style and cast cleanup

* Tests - fix README indentation

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Add CeedPragmaOMP to bps (#338)


* Convert petsc BP3&4 to loops

* Update petsc/bp4.h looping

* Switch to CeedPragmaSIMD and make examples/petsc/bp3.h consistent with bp4.h

Remove CeedPragm

Add CeedPragmaOMP to bps (#338)


* Convert petsc BP3&4 to loops

* Update petsc/bp4.h looping

* Switch to CeedPragmaSIMD and make examples/petsc/bp3.h consistent with bp4.h

Remove CeedPragmaOMP directive in Nek example and update documentation

* Remove restric qualifier in petsc/bp3.h and update documentation

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Fix postprocessing script (#339)

* Fix postprocessing scripts after PR #314

Merge pull request #336 from CEED/jeremy/cuda-mem-enum

CUDA - Rename SyncState -> CeedCudaSyncState

CUDA - Rename SyncState -> CeedCudaSyncState

Homogenize examples by using ncomp and dim (#335)

* Homogenize examples by using ncomp and dim

Merge pull request #333 from CEED/jed/ns-periodic

Navier-Stokes: add support for periodic boundary conditions

navier-stokes: remove unused variables

navier-stokes: add -process_grid and make resolution mean something

Formerly, the process grid was always automatically determined by the
number of processes. Now, use that as default, but allow it

navier-stokes: add -process_grid and make resolution mean something

Formerly, the process grid was always automatically determined by the
number of processes. Now, use that as default, but allow it to be
fully specified. For example, one can now run a quasi-2D simulation
by adding periodicity in z. For example,

mpiexec -n 32 ./navierstokes -process_grid 8,4,1 -resx 100 -resy 100 -resz 100 -lz 100 -periodic 0,0,1

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navier-stokes: add support for periodic boundary conditions

Change mapping to DM Vec from global-to-global to local-to-global to
support periodicity without using DMDA periodic (for which coordinate

navier-stokes: add support for periodic boundary conditions

Change mapping to DM Vec from global-to-global to local-to-global to
support periodicity without using DMDA periodic (for which coordinates
are ill-defined relative to what VTK expects).

Coordinates are now written with physical, rather than nondimensional,
units.

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Merge pull request #334 from CEED/jeremy/travis-debug

Work around LIBXSMM bug

Work around LIBXSMM bug; reset LIBXSMM to 07e360a

Merge pull request #332 from CEED/valeria/NS-update-documentation

Update NS example documentation

Update documentation after PR #323