Merge remote-tracking branch 'origin/release'

Merge branch 'balay/update-doc-req' into 'release'

doc: update numpy requriement

See merge request petsc/petsc!9004

doc: update numpy requriement - as 2.0.0 fails to build with "Apple clang version 17.0.0 (clang-1700.6.3.2)"

Merge branch 'barry/2024-04-29/add-fortran-enums' into 'main'

Major updates to Fortran interface

See merge request petsc/petsc!7517

Fortran 90: fully embrace After 34 years!

- deprecate use of 'F90' in Fortran function names
- use Fortran pointers when appropriate
- the new Fortran API is not backward compatible with previous ve

Fortran 90: fully embrace After 34 years!

- deprecate use of 'F90' in Fortran function names
- use Fortran pointers when appropriate
- the new Fortran API is not backward compatible with previous versions!
- also clean up inconsistent PETSc code detected by new Fortran generation tools
- drop use of bfort
- automatically generate all the Fortran PETSc objects, enums etc from the include files
- generate most of the Fortran interface definitions and functions from the source code
- simplify the number and organization of Fortran modules

Co-authored-by: Jose E. Roman <jroman@dsic.upv.es>

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Merge remote-tracking branch 'origin/release'

Merge branch 'barry/2025-01-11/convert-some-rst-to-md/release' into 'release'

Convert some of the rst files to md with ./rst2myst convert --config config.yaml *.rst

See merge request petsc/petsc!

Merge branch 'barry/2025-01-11/convert-some-rst-to-md/release' into 'release'

Convert some of the rst files to md with ./rst2myst convert --config config.yaml *.rst

See merge request petsc/petsc!8075

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Convert some of the rst files to md with ./rst2myst convert --config config.yaml *.rst

Need to manually fix

(petsc-developers-communication-channels)= to (petsc_developers_communication_channels)

Convert some of the rst files to md with ./rst2myst convert --config config.yaml *.rst

Need to manually fix

(petsc-developers-communication-channels)= to (petsc_developers_communication_channels)=

[include/petscerror.h](/include/petscerror.h.html) to <a href="PETSC_DOC_OUT_ROOT_PLACEHOLDER/include/petscerror.h.html">include/petscerror.h</a>

and friends

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Merge remote-tracking branch 'origin/release'

Merge branch 'barry/2024-07-08/minor-plex-docs/release' into 'release'

Build PETSc and petsc4py docs with the same requirements file

See merge request petsc/petsc!7678

Update sphinx packages used to build docs make petsc4py docs shared common requirements.txt

This prevents errors such as below when building docs

Running Sphinx v7.3.7
Using PETSC inventory from fi

Update sphinx packages used to build docs make petsc4py docs shared common requirements.txt

This prevents errors such as below when building docs

Running Sphinx v7.3.7
Using PETSC inventory from file:///Users/barrysmith/Src/petsc/doc/_build/html/objects.inv
<Inventory (url): PETSc v3.21, 7842 objects>

Exception occurred:
File "petsc4py/PETSc.pyx", line 1, in init petsc4py.PETSc
ValueError: numpy.dtype size changed, may indicate binary incompatibility. Expected 96 from C header, got 88 from PyObject

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Merge remote-tracking branch 'origin/release'

Merge branch 'dalcinl/builddist/release' into 'release'

Fix building distribution tarball

See merge request petsc/petsc!7510

Fix building distribution tarball

* Add wheel as a requirement, it is needed for running `setup.py`.
* Update exclude location for petsc4py.egg-info directory.
* Add `set -e` to builddist script to

Fix building distribution tarball

* Add wheel as a requirement, it is needed for running `setup.py`.
* Update exclude location for petsc4py.egg-info directory.
* Add `set -e` to builddist script to prevent errors going unnoticed.

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Merge remote-tracking branch 'origin/release'

Merge branch 'dependabot/pip/doc/jinja2-3.1.3' into 'release'

docs: bump jinja2 from 3.0.1 to 3.1.3 in /doc

See merge request petsc/petsc!7176

Bump jinja2 from 3.0.1 to 3.1.3 in /doc

Bumps [jinja2](https://github.com/pallets/jinja) from 3.0.1 to 3.1.3.
- [Release notes](https://github.com/pallets/jinja/releases)
- [Changelog](https://githu

Bump jinja2 from 3.0.1 to 3.1.3 in /doc

Bumps [jinja2](https://github.com/pallets/jinja) from 3.0.1 to 3.1.3.
- [Release notes](https://github.com/pallets/jinja/releases)
- [Changelog](https://github.com/pallets/jinja/blob/main/CHANGES.rst)
- [Commits](https://github.com/pallets/jinja/compare/3.0.1...3.1.3)

---
updated-dependencies:
- dependency-name: jinja2
dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>

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Merge branch 'barry/2023-07-29/manual-page-bibliography-automation' into 'main'

Create system for automatically adding References: section when {cite} appears in the manual page

See merge request p

Merge branch 'barry/2023-07-29/manual-page-bibliography-automation' into 'main'

Create system for automatically adding References: section when {cite} appears in the manual page

See merge request petsc/petsc!6769

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Fixes for bibtex processing

Commit-type: housekeeping

Merge remote-tracking branch 'origin/release'

Merge branch 'dalcinl/petsc4py-fix' into 'release'

petsc4py: Pin Cython 0.29.36

See merge request petsc/petsc!6746

petsc4py: Pin Cython 0.29.36

Merge remote-tracking branch 'origin/release'

Merge branch 'balay/ci-cython-0.30.0-failure' into 'release'

Try: require = 'Cython == 0.29.36'

See merge request petsc/petsc!6720

Try: require = 'Cython == 0.29.36'

As petsc4py has build errors with cython-0.30.0