| #
b3fc9300
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| 01-May-2014 |
Vijay Mahadevan <vijay.m@gmail.com> |
Merge remote-tracking branch 'origin/master' into feature-dmmoab
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| #
49fcfd5b
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| 01-May-2014 |
Vijay Mahadevan <vijay.m@gmail.com> |
Merged petsc/petsc into master
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| #
b0288186
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| 30-Mar-2014 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/feature-plex-hdf5'
* knepley/feature-plex-hdf5: (63 commits)
DMPlex ex2: Added an example that checks a mesh
DMPlex: #ifdef support functions for HDF5
TS: Fix output sequ
Merge branch 'knepley/feature-plex-hdf5'
* knepley/feature-plex-hdf5: (63 commits)
DMPlex ex2: Added an example that checks a mesh
DMPlex: #ifdef support functions for HDF5
TS: Fix output sequence
DMPlex: Check for HDF5 attributes before writing them
DMPlex: Label with timestep number since we do not have times
Viewer+HDF5: Added PetscViewerHDF5HasAttribute()
TS: Set output sequence for timesteps
DMPlex: Handle output sequences - Added static to some functions
DM: Add idea of an output sequence - Added DMGet/SetOutputSequenceNumber() - Added doc for outputDM
REVERT TS: Timestep gets set into DMTS
DMPlex: Fix up HDF5 segregation
DMPlex: Replace MAXPATHLEN with PETSC_MAX_PATH_LEN
DMPlex: Fix HDF5 timestep handling
DMPlex: Set correct block size on HDF5 field vectors
TS: Timestep gets set into DMTS
DMTS: Added timestep
DMPlex: Fix output of fields - Corrected name - Fixed vector type
DMPlex: Return errors from HDF5 function
DMPlex+Viewer: Now output separate fields for viz - Added the PETSC_VIEWER_HDF5_VIZ format for creating viz fields - Added field type determination
Sys+HDF5: Added PetscDataType string and HDF5 support for it
...
Conflicts:
config/BuildSystem/config/packages/__init__.py
src/ts/interface/ts.c
show more ...
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| #
211e18df
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| 30-Mar-2014 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/feature-plex-hdf5' into knepley/feature-plex-bc
* knepley/feature-plex-hdf5: (61 commits)
TS: Fix output sequence
DMPlex: Check for HDF5 attributes before writing them
DM
Merge branch 'knepley/feature-plex-hdf5' into knepley/feature-plex-bc
* knepley/feature-plex-hdf5: (61 commits)
TS: Fix output sequence
DMPlex: Check for HDF5 attributes before writing them
DMPlex: Label with timestep number since we do not have times
Viewer+HDF5: Added PetscViewerHDF5HasAttribute()
TS: Set output sequence for timesteps
DMPlex: Handle output sequences - Added static to some functions
DM: Add idea of an output sequence - Added DMGet/SetOutputSequenceNumber() - Added doc for outputDM
REVERT TS: Timestep gets set into DMTS
DMPlex: Fix up HDF5 segregation
DMPlex: Replace MAXPATHLEN with PETSC_MAX_PATH_LEN
DMPlex: Fix HDF5 timestep handling
DMPlex: Set correct block size on HDF5 field vectors
TS: Timestep gets set into DMTS
DMTS: Added timestep
DMPlex: Fix output of fields - Corrected name - Fixed vector type
DMPlex: Return errors from HDF5 function
DMPlex+Viewer: Now output separate fields for viz - Added the PETSC_VIEWER_HDF5_VIZ format for creating viz fields - Added field type determination
Sys+HDF5: Added PetscDataType string and HDF5 support for it
IS: Fix compiler warning
IS: Forgot to protect HDF5
...
Conflicts:
config/BuildSystem/config/packages/__init__.py
src/ts/interface/ts.c
show more ...
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| #
e56d480e
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| 24-Mar-2014 |
Matthew G. Knepley <knepley@gmail.com> |
DMPlex: Now DMPlexInterpolate() allows the new mesh to be inserted into an existing DM
- If the input is non-NULL, no new DM is created
- This allows it to functions within the DMLoad() paradigm
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| #
b2533dd1
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| 22-Mar-2014 |
Vijay Mahadevan <vijay.m@gmail.com> |
Fixing merge conflicts in dmregall.
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| #
0c9e52d3
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| 22-Mar-2014 |
Vijay Mahadevan <vijay.m@gmail.com> |
Merged petsc/petsc into master
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| #
bb161d1f
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| 21-Mar-2014 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'mlange/feature-plex-mesh-from-file'
* mlange/feature-plex-mesh-from-file:
DMPlex: Switching more tests to the new ExodusII wrappers
DMPlex: Switching tests to use the new ExodusII/
Merge branch 'mlange/feature-plex-mesh-from-file'
* mlange/feature-plex-mesh-from-file:
DMPlex: Switching more tests to the new ExodusII wrappers
DMPlex: Switching tests to use the new ExodusII/CGNS file wrappers
DMPlex: Add DMPlexCreateCGNSFromFile() wrapper
DMPlex: Add DMPlexCreateExodusFromFile() wrapper
Conflicts:
config/BuildSystem/config/packages/__init__.py
show more ...
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| #
204681ed
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| 19-Mar-2014 |
Vijay Mahadevan <vijay.m@gmail.com> |
Merged petsc/petsc into master
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| #
9c925a2c
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| 18-Mar-2014 |
Shri <abhyshr@mcs.anl.gov> |
Merge branch 'master' into shri/ts-events
Conflicts:
src/ts/interface/ts.c
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| #
5f6acfaf
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| 18-Mar-2014 |
Shri <abhyshr@mcs.anl.gov> |
Merge branch 'master' into shri/feature-dm-circuit
Conflicts:
src/dm/impls/makefile
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| #
44cd5272
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| 26-Feb-2014 |
Michael Lange <michael.lange@imperial.ac.uk> |
DMPlex: Add DMPlexCreateCGNSFromFile() wrapper
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| #
1d763ceb
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| 17-Mar-2014 |
Peter Brune <brune@mcs.anl.gov> |
Merge branch 'master' into prbrune/matcoloring-greedy
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| #
3ff8325b
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| 08-Mar-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/google
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| #
3d2707ba
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| 03-Mar-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/nonlinearsolvertable
Conflicts:
include/petscsnes.h
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| #
9776ef86
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| 03-Mar-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/cleanup-includes
Conflicts:
makefile
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| #
ab15ae43
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| 03-Mar-2014 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-fas
* master: (863 commits)
Revert "mpich: use latest mpich tarball with gcov but use '--enable-coverage' mpich configure option."
MatCreateTransp
Merge branch 'master' into knepley/feature-plex-fas
* master: (863 commits)
Revert "mpich: use latest mpich tarball with gcov but use '--enable-coverage' mpich configure option."
MatCreateTranspose: fix for lazy block size
mpich: use latest mpich tarball with gcov but use '--enable-coverage' mpich configure option.
configure: add FC_DEFINE_FLAG to petscvariables
added a citation for pounders, Stefan finally came through
update to latest netcdf fixes bug that did not allow building on recent Mac OS X
DMPlex: Fixes for CGNS - Fixed loop bounds since CGNS uses closed intervals - Bug with mixed cell types - Typo with coordinates
final updates from nightly tests
fix for countcfunction
removed outdated docs and comments on MatStructure usage removed SAME_PRECONDITIONER since no longer used removed unneed use of MatStructure in Schur complement matrix
removed MatStructure arguments from Tao
fixes for Sundials and fun3d cannot use MPIU_SUM for integer arrays
inplace ILU factorization must update state of inplace matrix to prevent infinite recursion of updating PC
fixes for BDDC by the way not having BDDC always in the testing is going to lead to trouble
the compute Jacobian functions for SNES and TS now do not take a MatStructure flag
KSPSetOperators() no longer has the MatStructure argument. The Mat objects now track that information themselves. Use KPS/PCSetReusePreconditioner() to prevent the recomputation of the preconditioner if the operator changed in the way that SAME_PRECONDITIONER did with KSPSetOperators()
tracks when Mat's have a change in nonzero structure this information can be used by PC to determine how preconditioners must be rebuilt currently only does an error check if the user said same nonzero pattern but actually changed the pattern
completed cleanup of removal of matrix pointers to compute jacobian routines
makefile: Added 'make includegraph' to create an inclusion dependency graph.
Contrib: Updated include-graph.sh script to ignore *.hh files
...
Conflicts:
src/dm/dt/interface/dt.c
show more ...
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| #
92cc3126
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| 27-Feb-2014 |
Matthew G. Knepley <knepley@gmail.com> |
Merge remote-tracking branch 'origin/knepley/fix-plex-cgns'
* origin/knepley/fix-plex-cgns:
DMPlex: Fixes for CGNS - Fixed loop bounds since CGNS uses closed intervals - Bug with mixed cell types
Merge remote-tracking branch 'origin/knepley/fix-plex-cgns'
* origin/knepley/fix-plex-cgns:
DMPlex: Fixes for CGNS - Fixed loop bounds since CGNS uses closed intervals - Bug with mixed cell types - Typo with coordinates
show more ...
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| #
59dfc837
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| 26-Feb-2014 |
Stefan Lemvig Glimberg <Stefan.Glimberg@lr.org> |
DMPlex: Fixes for CGNS
- Fixed loop bounds since CGNS uses closed intervals
- Bug with mixed cell types
- Typo with coordinates
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| #
020631bc
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| 19-Feb-2014 |
Peter Brune <brune@mcs.anl.gov> |
Merge branch 'master' into prbrune/snes-fascontinuation
Conflicts:
include/petscsnesfas.h
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| #
036f3cb5
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| 26-Jan-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into balay/tao-to-petsc
Conflicts:
include/makefile
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| #
f9cfb505
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| 26-Jan-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into knepley/feature-mat-zerorowscols-baij
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| #
c7ff62de
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| 13-Jan-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/wirth-fusion-materials
bad manual merge needs to be fixed
this is what happens when branches hang around too long
Conflicts:
src/ts/examples/tutorials/advection-dif
Merge branch 'master' into barry/wirth-fusion-materials
bad manual merge needs to be fixed
this is what happens when branches hang around too long
Conflicts:
src/ts/examples/tutorials/advection-diffusion-reaction/ex10.c
show more ...
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| #
52d48256
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| 10-Jan-2014 |
Vijay Mahadevan <vijay.m@gmail.com> |
Merged petsc/petsc into master
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| #
53b63473
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| 22-Dec-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' of bitbucket.org:petsc/petsc
|