Some missing CHKERR[Q|MPI]

Merge branch 'knepley/feature-plex-egads-mesh' into 'master'

Plex: Allow EGADS mesh creation through the normal mechanism

See merge request petsc/petsc!3364

Plex: Allow EGADS mesh creation through the normal mechanism

Merge branch 'barry/2020-08-16/fix-source-formatting' into 'master'

Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

See merge request petsc/petsc

Merge branch 'barry/2020-08-16/fix-source-formatting' into 'master'

Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

See merge request petsc/petsc!3064

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Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

Commit-type: portability-fix, testing-fix, style-fix, feature, maintainability
/spend 1.5h

Merge branch 'jacobf/fix-dmplex-ints' into 'master'

int -> PetscInt, double -> PetscReal/PetscScalar in DMPlex API for various front facing functions

See merge request petsc/petsc!2512

Add DMPlexCreateFromCellList[Parallel]Petsc and marked previous namesake as
deprecated. New function accpets only petsc datatypes, old function performs types conversions within. Affects tetgen, ctet

Add DMPlexCreateFromCellList[Parallel]Petsc and marked previous namesake as
deprecated. New function accpets only petsc datatypes, old function performs types conversions within. Affects tetgen, ctetgen, and any createfromcelllist[parallel] interfaces.

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sync with 5b72a2ce2e245e80f3c4d5fd294a594e197f5e74

Merge remote-tracking branch 'origin/maint'

Merge branch 'jolivet/fix-elemental-deadlock' into 'maint'

MATELEMENTAL deadlock when first Mat is on a subcommunicator

See merge request petsc/petsc!2862

Plex output changes

Merge remote-tracking branch 'origin/barry/2020-05-30/trivial-sizeof-fixes'

Updated the use of sizeof() when possible instead of using hardwired sizes for...

See merge request petsc/petsc!2827

Updated the use of sizeof() when possible instead of using hardwired sizes for functions whose string arguments
need sizes. In particular done for PetscOptionsGetString(), PetscOptionsString(), and a

Updated the use of sizeof() when possible instead of using hardwired sizes for functions whose string arguments
need sizes. In particular done for PetscOptionsGetString(), PetscOptionsString(), and a few other utilities

Commit-type: style-fix

Development Tools: Vim, Emacs, Eclipse

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Merge branch 'knepley/feature-plex-egads-refine' into 'master'

Knepley/feature plex egads refine

See merge request petsc/petsc!2836

Plex ex37: Nozzle test works
- Fixed reader for quads and bi-segments
- Added nozzle mesh

Merge branch 'jed/promote-examples-tests-tutorials' [petsc/petsc!2610]

* jed/promote-examples-tests-tutorials:
Promote examples/{tests,tutorials}/ to {tests,tutorials}/

Promote examples/{tests,tutorials}/ to {tests,tutorials}/

This shortens paths and improves consistency between test target names
and paths to the source and output files. Most of the work was
compl

Promote examples/{tests,tutorials}/ to {tests,tutorials}/

This shortens paths and improves consistency between test target names
and paths to the source and output files. Most of the work was
completed by this script, followed by mild cleanup of nonconforming
cases.

for makefile in `git ls-files 'src/*makefile'`; do
if rg -q 'DIRS.*\bexamples\b' $makefile; then
base=$(dirname $makefile)
dirs=$(cd $base/examples && ls -d tests tutorials 2>/dev/null | xargs echo)
perl -pi -e "s#^(DIRS.*)\bexamples\b#\1${dirs}#" $makefile
git rm $base/examples/makefile
for t in $dirs; do
git mv $base/examples/$t $base/
perl -pi -e "s#^(LOCDIR[[:space:]]*=).*#\1 $base/$t/#" $base/$t
done
fi
done

git grep -l -E -z 'examples/(tutorials|tests)' | xargs -0 perl -pi -e 's#examples/(tutorials|tests)#\1#g'
git checkout @ \
src/docs/website/documentation/changes/ \
src/benchmarks/results/

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