Merge branch 'ahmed/exodusii-improvements' into 'main'

ExodusII: cache variable names

See merge request petsc/petsc!7705

PetscViewer_ExodusII: Allow the viewer to set and query the name and number of variables (results) stored in an exodusII file. Cache this information to avoid repeated calls to exodusII functions.

A

PetscViewer_ExodusII: Allow the viewer to set and query the name and number of variables (results) stored in an exodusII file. Cache this information to avoid repeated calls to exodusII functions.

And update to use exodusII-v2024-06-27

Co-authored-by: Sarah Ahmed ahmes134@mcmaster.ca

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Merge branch 'jrwrigh/dm_box_label' into 'main'

Plex: Add box labeling to simplex, input meshes

See merge request petsc/petsc!7741

plex: Print out labels in sorted stratum order

Merge branch 'marboeuf/plex-naturalpointsf' into 'main'

Plex: create the natural point SF

See merge request petsc/petsc!5502

cleanup in plexnatural.c and linked examples

- make output of test26, ex26f90, and ex62f90 more terse
- Replace VecCreateLocalVector / VecDestroyLocalVector to get block size by VecGetLocalVectore /

cleanup in plexnatural.c and linked examples

- make output of test26, ex26f90, and ex62f90 more terse
- Replace VecCreateLocalVector / VecDestroyLocalVector to get block size by VecGetLocalVectore / VecRestoreLocalVector

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Plex: fix ex15, ex26, ex26f90, ex62f90

Fix examples in src/dm/impls/plex/tests. ex15_1 is disabled.

Merge branch 'jolivet/feature-rm-spaces-plurals' into 'main'

Remove unneeded spaces/plurals

See merge request petsc/petsc!5193

Remove extra spaces and unwanted plurals

Merge branch 'barry/2021-11-24/feature-plex-clearer-cells-per-rank' into 'main'

Fix DMView_Plex_ASCII to have clearer indications of what the numbers after i-cells are (per rank)

See merge request

Merge branch 'barry/2021-11-24/feature-plex-clearer-cells-per-rank' into 'main'

Fix DMView_Plex_ASCII to have clearer indications of what the numbers after i-cells are (per rank)

See merge request petsc/petsc!4599

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Fix DMView_Plex_ASCII to have clearer indications of what the numbers after i-cells are (per rank)

Update the test output files

Commit-type: debugability
\spend 45m

Merge branch 'bourdin/exodus-viewer' into 'main'

exodusii: viewer updates

See merge request petsc/petsc!3836

exodusii: updated test output for ex26 and added output for ex62, ex26f90, and ex62f90

Merge branch 'knepley/feature-dm-remove-hybrid' into 'master'

Knepley/feature dm remove hybrid

See merge request petsc/petsc!2614

DM+Plex: Example Fixes for cell type rewrite

Merge branch 'jed/promote-examples-tests-tutorials' [petsc/petsc!2610]

* jed/promote-examples-tests-tutorials:
Promote examples/{tests,tutorials}/ to {tests,tutorials}/

Promote examples/{tests,tutorials}/ to {tests,tutorials}/

This shortens paths and improves consistency between test target names
and paths to the source and output files. Most of the work was
compl

Promote examples/{tests,tutorials}/ to {tests,tutorials}/

This shortens paths and improves consistency between test target names
and paths to the source and output files. Most of the work was
completed by this script, followed by mild cleanup of nonconforming
cases.

for makefile in `git ls-files 'src/*makefile'`; do
if rg -q 'DIRS.*\bexamples\b' $makefile; then
base=$(dirname $makefile)
dirs=$(cd $base/examples && ls -d tests tutorials 2>/dev/null | xargs echo)
perl -pi -e "s#^(DIRS.*)\bexamples\b#\1${dirs}#" $makefile
git rm $base/examples/makefile
for t in $dirs; do
git mv $base/examples/$t $base/
perl -pi -e "s#^(LOCDIR[[:space:]]*=).*#\1 $base/$t/#" $base/$t
done
fi
done

git grep -l -E -z 'examples/(tutorials|tests)' | xargs -0 perl -pi -e 's#examples/(tutorials|tests)#\1#g'
git checkout @ \
src/docs/website/documentation/changes/ \
src/benchmarks/results/

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