Merge branch 'MarDiehl/improve-Fortran-examples' into 'main'

Improve Fortran examples

See merge request petsc/petsc!8698

cleanup suggestions by @BarrySmith

also noticed a few stray functions not marked as external and put them
into modules

place all the include statements at the top

Repeated inclusion in multiple location, e.g. at the start of a
module or function is not needed. This becomes clear if all includes are
outside of the ac

place all the include statements at the top

Repeated inclusion in multiple location, e.g. at the start of a
module or function is not needed. This becomes clear if all includes are
outside of the actual Fortran code.
Added regex to check that with the help of @sbalay

show more ...

Merge branch 'barry/2025-07-01/format-fortran-source-fprettify' into 'main'

format fortran source with fprettify

See merge request petsc/petsc!8514

Run fprettify

Merge branch 'MarDiehl/Fortran-use-ISO_C_BINDING' into 'main'

include ISO_C_BINDING

See merge request petsc/petsc!8481

use integer and real kinds from ISO_C_binding

The kinds in this module are guaranteed to be compatible with the
corresponding C types.
Requires to include the ISO_C_binding module in interfaces and

use integer and real kinds from ISO_C_binding

The kinds in this module are guaranteed to be compatible with the
corresponding C types.
Requires to include the ISO_C_binding module in interfaces and stray
functions

show more ...

Merge branch 'barry/2024-04-29/add-fortran-enums' into 'main'

Major updates to Fortran interface

See merge request petsc/petsc!7517

Fortran 90: fully embrace After 34 years!

- deprecate use of 'F90' in Fortran function names
- use Fortran pointers when appropriate
- the new Fortran API is not backward compatible with previous ve

Fortran 90: fully embrace After 34 years!

- deprecate use of 'F90' in Fortran function names
- use Fortran pointers when appropriate
- the new Fortran API is not backward compatible with previous versions!
- also clean up inconsistent PETSc code detected by new Fortran generation tools
- drop use of bfort
- automatically generate all the Fortran PETSc objects, enums etc from the include files
- generate most of the Fortran interface definitions and functions from the source code
- simplify the number and organization of Fortran modules

Co-authored-by: Jose E. Roman <jroman@dsic.upv.es>

show more ...

Merge branch 'barry/2022-08-22/rm-common-block-examples' into 'main'

Remove last three Fortran examples that use common blocks (and include files for the common blocks)

See merge request petsc/pets

Merge branch 'barry/2022-08-22/rm-common-block-examples' into 'main'

Remove last three Fortran examples that use common blocks (and include files for the common blocks)

See merge request petsc/petsc!5542

show more ...

Name all modules in Fortran examples consistently with examplenamemodule to

* prevent conflicts between examples
* to make it easy to determine which module files generated in the filesystem are for

Name all modules in Fortran examples consistently with examplenamemodule to

* prevent conflicts between examples
* to make it easy to determine which module files generated in the filesystem are for each example

Commit-type: housekeeping
/spend 20m
Thanks-to: Satish Balay

show more ...

Merge branch 'barry/2022-05-24/add-petsccall-fortran-examples' into 'main'

Update all Fortran examples to modern error checking with PetscCallXXX() wrappers around PETSc/MPI function calls.

See mer

Merge branch 'barry/2022-05-24/add-petsccall-fortran-examples' into 'main'

Update all Fortran examples to modern error checking with PetscCallXXX() wrappers around PETSc/MPI function calls.

See merge request petsc/petsc!5271

show more ...

Add modern error checking to rest of Fortran examples

/spend 2.5h

Merge branch 'barry/2022-04-01/fix-petsc-options-begin-end/release' into 'main'

Remove bogus error returns from Begin/End() macros

See merge request petsc/petsc!5069

Cleanup of introduction of PetscCall()

* remove bogus error flags from XXXBegin()/End() macros such as PetscOptionsBegin()/End()

* rename for consistency certain XXXBegin()/End() macros such as Mat

Cleanup of introduction of PetscCall()

* remove bogus error flags from XXXBegin()/End() macros such as PetscOptionsBegin()/End()

* rename for consistency certain XXXBegin()/End() macros such as MatPreallocateInitialize()/Finalize()

* fix many lingering ierr = XXX that arose from multiline function calls

* sync slepc/hpddm - to use snapshots with the same changes

Commit-type: error-checking, style-fix
/spend 8h

show more ...

Merge remote-tracking branch 'origin/release'

Merge branch 'jose/release/restore-chkerrq-fortran' into 'release'

Restore use of CHKERRQ in *.F90 examples

See merge request petsc/petsc!5088

Restore use of CHKERRQ in *.F90 examples

Merge branch 'jacobf/2022-02-23/variadic-chkerr' into 'main'

Variadic CHKERRQ()

See merge request petsc/petsc!4889

The great renaming:

- CHKERRQ() -> PetscCall()
- CHKERRV() -> PetscCallVoid()
- CHKERRMPI() -> PetscCallMPI()
- CHKERRABORT() -> PetscCallAbort()
- CHKERRCONTINUE() -> PetscCallContinue()
- CHKERRXX

The great renaming:

- CHKERRQ() -> PetscCall()
- CHKERRV() -> PetscCallVoid()
- CHKERRMPI() -> PetscCallMPI()
- CHKERRABORT() -> PetscCallAbort()
- CHKERRCONTINUE() -> PetscCallContinue()
- CHKERRXX() -> PetscCallThrow()
- CHKERRCXX() -> PetscCallCXX()
- CHKERRCUDA() -> PetscCallCUDA()
- CHKERRCUBLAS() -> PetscCallCUBLAS()
- CHKERRCUSPARSE() -> PetscCallCUSPARSE()
- CHKERRCUSOLVER() -> PetscCallCUSOLVER()
- CHKERRCUFFT() -> PetscCallCUFFT()
- CHKERRCURAND() -> PetscCallCURAND()
- CHKERRHIP() -> PetscCallHIP()
- CHKERRHIPBLAS() -> PetscCallHIPBLAS()
- CHKERRHIPSOLVER() -> PetscCallHIPSOLVER()
- CHKERRQ_CEED() -> PetscCallCEED()
- CHKERR_FORTRAN_VOID_FUNCTION() -> PetscCallFortranVoidFunction()
- CHKERRMKL() -> PetscCallMKL()
- CHKERRMMG() -> PetscCallMMG()
- CHKERRMMG_NONSTANDARD() -> PetscCallMMG_NONSTANDARD()
- CHKERRCGNS() -> PetscCallCGNS()
- CHKERRPTSCOTCH() -> PetscCallPTSCOTCH()
- CHKERRSTR() -> PetscCallSTR()
- CHKERRTC() -> PetscCallTC()

show more ...

Merge branch 'barry/2020-08-16/fix-source-formatting' into 'master'

Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

See merge request petsc/petsc

Merge branch 'barry/2020-08-16/fix-source-formatting' into 'master'

Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

See merge request petsc/petsc!3064

show more ...

Turn on checkbadSource test to generate an error when found; fix all source code that causes errors

Commit-type: portability-fix, testing-fix, style-fix, feature, maintainability
/spend 1.5h

Merge branch 'jed/promote-examples-tests-tutorials' [petsc/petsc!2610]

* jed/promote-examples-tests-tutorials:
Promote examples/{tests,tutorials}/ to {tests,tutorials}/

Promote examples/{tests,tutorials}/ to {tests,tutorials}/

This shortens paths and improves consistency between test target names
and paths to the source and output files. Most of the work was
compl

Promote examples/{tests,tutorials}/ to {tests,tutorials}/

This shortens paths and improves consistency between test target names
and paths to the source and output files. Most of the work was
completed by this script, followed by mild cleanup of nonconforming
cases.

for makefile in `git ls-files 'src/*makefile'`; do
if rg -q 'DIRS.*\bexamples\b' $makefile; then
base=$(dirname $makefile)
dirs=$(cd $base/examples && ls -d tests tutorials 2>/dev/null | xargs echo)
perl -pi -e "s#^(DIRS.*)\bexamples\b#\1${dirs}#" $makefile
git rm $base/examples/makefile
for t in $dirs; do
git mv $base/examples/$t $base/
perl -pi -e "s#^(LOCDIR[[:space:]]*=).*#\1 $base/$t/#" $base/$t
done
fi
done

git grep -l -E -z 'examples/(tutorials|tests)' | xargs -0 perl -pi -e 's#examples/(tutorials|tests)#\1#g'
git checkout @ \
src/docs/website/documentation/changes/ \
src/benchmarks/results/

show more ...