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459e96c1
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| 28-Aug-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-plex-refine-3d
* master: (273 commits)
Mat ex170: Comments
VTK: Small fix to error message (.vts to .vtu)
VTK: Small fix to error message
Fixed bib
Merge branch 'master' into knepley/feature-plex-refine-3d
* master: (273 commits)
Mat ex170: Comments
VTK: Small fix to error message (.vts to .vtu)
VTK: Small fix to error message
Fixed bib entries
Bib: Updates
AO: fix erroneous processing of -ao_view and factor into AOViewFromOptions
doc: fix named argument in {Vec,Mat,DM}ViewFromOptions
Sys: add PetscDataTypeFromString() and test code
Mat: Should say that it has a nullspace in MatView()
parms: update tarball with fix for namespace conflict with metis
fix citation 'Golub_Varga_1961'
parmetis: update tarball to parmetis-4.0.2-p5 which fixes an install issue with cygwin
Sys Logging: revert parent traversal
fixed hdf5.py so that if self.libraries.compression is None the code still runs correctly
DMDA: fix bad cast of DM_DA to PetscObject
MatClique: follow DistMultiVec API changes
MatClique: remove unused variables
config cmakeboot: add C++ flags any time compiler is available
config OpenMP: check for C++ flag any time the compiler is available
replaced all left-over uses of a single PetscMalloc() to allocated multiple arrays: replaced with PetscMallocN() The only ones left are when the second array is set into the first array and one ugly usage in the MUMPS interface that cannot be easily fixed
...
Conflicts:
include/petscdmplex.h
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| #
c0c93d0e
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| 28-Aug-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-dmda-section
* master: (287 commits)
Mat ex170: Comments
VTK: Small fix to error message (.vts to .vtu)
VTK: Small fix to error message
Fixed bib e
Merge branch 'master' into knepley/feature-dmda-section
* master: (287 commits)
Mat ex170: Comments
VTK: Small fix to error message (.vts to .vtu)
VTK: Small fix to error message
Fixed bib entries
Bib: Updates
AO: fix erroneous processing of -ao_view and factor into AOViewFromOptions
doc: fix named argument in {Vec,Mat,DM}ViewFromOptions
Sys: add PetscDataTypeFromString() and test code
Mat: Should say that it has a nullspace in MatView()
parms: update tarball with fix for namespace conflict with metis
fix citation 'Golub_Varga_1961'
parmetis: update tarball to parmetis-4.0.2-p5 which fixes an install issue with cygwin
Sys Logging: revert parent traversal
fixed hdf5.py so that if self.libraries.compression is None the code still runs correctly
DMDA: fix bad cast of DM_DA to PetscObject
MatClique: follow DistMultiVec API changes
MatClique: remove unused variables
config cmakeboot: add C++ flags any time compiler is available
config OpenMP: check for C++ flag any time the compiler is available
replaced all left-over uses of a single PetscMalloc() to allocated multiple arrays: replaced with PetscMallocN() The only ones left are when the second array is set into the first array and one ugly usage in the MUMPS interface that cannot be easily fixed
...
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| #
bfb581aa
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| 28-Aug-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'knepley/fix-fieldsplit-aux'
* knepley/fix-fieldsplit-aux:
FieldSplit: Should propagate DM for second field to Schur complement solver
DMComposite: Bug fix for Fieldsplit support
Merge branch 'knepley/fix-fieldsplit-aux'
* knepley/fix-fieldsplit-aux:
FieldSplit: Should propagate DM for second field to Schur complement solver
DMComposite: Bug fix for Fieldsplit support
DMComposite: Make DMGetField() mechanism work - Want to attach info to ISes for FieldSplit
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| #
b20b4189
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| 19-Jun-2013 |
Matthew G. Knepley <knepley@gmail.com> |
FieldSplit: Should propagate DM for second field to Schur complement solver
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| #
6a4bb4b0
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| 26-Apr-2013 |
Jed Brown <jedbrown@mcs.anl.gov> |
Merge bug fix/patch releases up to 3.2-p7 into maint-3.2
* commit 'a9157d915ed96804280c3dc077186a2a633fd603': (157 commits)
Fix PyPI download URL to help pip figure out the release version
#1109
Merge bug fix/patch releases up to 3.2-p7 into maint-3.2
* commit 'a9157d915ed96804280c3dc077186a2a633fd603': (157 commits)
Fix PyPI download URL to help pip figure out the release version
#110990 fix timestamp order for .so vs .a during 'make install'
Update FFTW download
Increase patchlevel to 3.2-p7
...
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| #
7e7d4f0d
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| 10-Apr-2013 |
Richard Mills <rtm@eecs.utk.edu> |
Merged petsc/petsc into rmills/petsc master
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| #
2fa5aa93
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| 03-Apr-2013 |
Jed Brown <jed@59A2.org> |
Merge branch 'jed/fieldsplit-schur'
* jed/fieldsplit-schur:
PCFieldSplit: make Schur complement use normal iterative solver by default
MatSchurComplementSetKSP: hold a reference to incoming KSP
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| #
8a1af44d
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| 03-Apr-2013 |
Jed Brown <jed@59A2.org> |
Merge branch 'barry/rm-xxxregisterdynamic'
* barry/rm-xxxregisterdynamic:
Registration: remove stale 'XXRegisterDynamic)' entries in man pages
TS examples: fix use of PetscFunctionList and add t
Merge branch 'barry/rm-xxxregisterdynamic'
* barry/rm-xxxregisterdynamic:
Registration: remove stale 'XXRegisterDynamic)' entries in man pages
TS examples: fix use of PetscFunctionList and add to nightlies
Changes: Note updates to XRegisterDynamic/PetscObjectComposeFunctionDynamic
PetscObjectComposeFunctionDynamic: remove stale docs and usage
developers.tex: remove complications from function composition with dlls
removed string version of function name for XXXRegister(), PetscFunctionListAdd() and PetscObjectComposeFunction()
changes: document PetscFunctionListAdd() API change
developers.tex: update documentation of PetscObjectComposeFunction
removed path and MPI_Comm arguments from PetscFunctionListFind/Add()
removed path argument to XXXInitializePackage() and XXXRegister()
removed XXXRegisterDynamic() but kept the APIs for everything else underneath the same phase I of the update to handling registering function pointers
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| #
21635b76
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| 31-Mar-2013 |
Jed Brown <jed@59A2.org> |
PCFieldSplit: make Schur complement use normal iterative solver by default
Consider the block system
J = [A B; C D]
where S = D - C A_inner^{-1} B. It is common that if an iterative solve
is per
PCFieldSplit: make Schur complement use normal iterative solver by default
Consider the block system
J = [A B; C D]
where S = D - C A_inner^{-1} B. It is common that if an iterative solve
is performed with S, that A_inner^{-1} uses the same solver
configuration as A^{-1}. PCFieldSplit required this until
514bf10dab8e522ec43f5ccc117d5d97e4aaca18, when the option of a distinct
A_inner was added. In that commit, the default inner solver for A^{-1}
was (likely unintentionally) changed to KSPPREONLY, as a side-effect of
calling MatSchurComplementSetKSP() with no modifications.
This patch reinstates the original default, in which A^{-} =
A_inner^{-1} is defined by GMRES instead of PREONLY. Note that it is
also common to use PREONLY for S, in which case S may not be used
directly, and the user is responsible for setting an inexact method for
fieldsplit's A^{-1}.
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| #
ab575887
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| 31-Mar-2013 |
Jed Brown <jed@59A2.org> |
Merge commit 'db920c60b5f345bb9ed19d43f91271ac5f532050' into jed/fieldsplit-schur
* commit 'db920c60b5f345bb9ed19d43f91271ac5f532050':
MatSchurComplementSetKSP: hold a reference to incoming KSP
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| #
db920c60
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| 31-Mar-2013 |
Jed Brown <jed@59A2.org> |
MatSchurComplementSetKSP: hold a reference to incoming KSP
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| #
a983c5aa
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| 28-Mar-2013 |
Jungho Lee <julee@mcs.anl.gov> |
Merge branch 'master' of bitbucket.org:petsc/petsc
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| #
4d2d963c
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| 28-Mar-2013 |
Richard Mills <rtm@eecs.utk.edu> |
Merged petsc/petsc into rmills/petsc master
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| #
e1d27e54
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| 28-Mar-2013 |
Jed Brown <jed@59A2.org> |
Merge branch 'barry/rm-xxxregisterdynamic' into jed/ts-eimex
PetscObjectComposeFunctionDynamic() and TSRegisterDynamic() were
replaced by PetscObjectComposeFunction() and TSRegister(), both of which
Merge branch 'barry/rm-xxxregisterdynamic' into jed/ts-eimex
PetscObjectComposeFunctionDynamic() and TSRegisterDynamic() were
replaced by PetscObjectComposeFunction() and TSRegister(), both of which
drop the string name argument.
* barry/rm-xxxregisterdynamic: (82 commits)
...
Conflicts:
src/ts/interface/tsregall.c
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| #
bdf89e91
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| 26-Mar-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
removed string version of function name for XXXRegister(), PetscFunctionListAdd() and PetscObjectComposeFunction()
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| #
365a8a9e
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| 21-Mar-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
removed excessive use of CHKMEMQ;
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| #
eb975fb2
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| 20-Mar-2013 |
Jed Brown <jed@59A2.org> |
Merge branch 'jed/fieldsplit-use-amat'
* jed/fieldsplit-use-amat:
PCFieldSplit: change -pc_fieldpslit_real_diagonal to -pc_use_amat
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| #
4042b796
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| 17-Mar-2013 |
Jed Brown <jed@59A2.org> |
Merge branch 'master' into jed/ts-eimex
Sync to include Git conversion, PETSC_EXTERN, and minor API changes.
Conflicts:
src/ts/interface/tsregall.c
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| #
f5236f50
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| 16-Mar-2013 |
Jed Brown <jed@59A2.org> |
PCFieldSplit: change -pc_fieldpslit_real_diagonal to -pc_use_amat
Follows on: 49517cde1b273295cf3941ef5a8aecdb444b7da7
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| #
c19eab39
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| 06-Mar-2013 |
Richard Tran Mills <rmills@ornl.gov> |
Automerge.
Hg-commit: b6659d546870fb013f3da5bcd5066d1dc0dc329c
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| #
296840b1
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| 06-Mar-2013 |
Jed Brown <jed@59A2.org> |
Merge branch 'master' of gitifyhg::ssh://hg@bitbucket.org/BarryFSmith/petsc-dev-simp
Symbol visibility and namespacing.
C++ builds always set extern "C" and can be called from plain C. Most
users w
Merge branch 'master' of gitifyhg::ssh://hg@bitbucket.org/BarryFSmith/petsc-dev-simp
Symbol visibility and namespacing.
C++ builds always set extern "C" and can be called from plain C. Most
users will only want --with-clanguage=C++ for std::complex.
Hg-commit: f848d02318cae92d7b32037c7ee88f92dbe46347
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| #
8cc058d9
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| 06-Mar-2013 |
Jed Brown <jed@59A2.org> |
Change all PETSC_EXTERN_C to PETSC_EXTERN
Hg-commit: 8d2ebbb193fb583bccc64015e35640c4e08c3426
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| #
39d7646b
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| 06-Mar-2013 |
Jed Brown <jed@59A2.org> |
Change all PETSC_EXTERN_C to PETSC_EXTERN
Hg-commit: ba0cf153561ff2dc521f42e94b7164fbe7b5d798
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| #
2761ed1d
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| 05-Mar-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
merge, terrible manual process with many conflicts with Jed's PETSC_INTERNAL
Hg-commit: 84df07d03c6e55bd0f27bd5ee8c1738562bd529d
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| #
2c3ca321
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| 05-Mar-2013 |
Jed Brown <jed@59A2.org> |
Merge branch 'visibility-externc'
Hg-commit: e48e1e796cbc108f60f0ea591bad057847501587
|