Add HYPRE SMG preconditionner
Added -mpi_linear_solver_server that allows using MPI parallel KSP solvers from sequential or OpenMPI codeUses -ksp_type preonly -pc_type mpi The inner KSP has a prefix of -mpi-mpi_linear_solver_
Added -mpi_linear_solver_server that allows using MPI parallel KSP solvers from sequential or OpenMPI codeUses -ksp_type preonly -pc_type mpi The inner KSP has a prefix of -mpi-mpi_linear_solver_server_view gives a very short summary of the solvesCommit-type: feature/spend 15h
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Change if () { PetscCall() } three liner and friends to one linersfor i in `git ls-files | grep "\.[ch]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ ]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\
Change if () { PetscCall() } three liner and friends to one linersfor i in `git ls-files | grep "\.[ch]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ ]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\$[ ]*PetscCall(\([- ._+=a-z0-9A-Z>*,()]*);\)\$[ ]*}\$?\1if (\2) PetscCall(\3$?g' | tr '$' '\n' | sed 's?ZZZ?$?g' > $i.joe ; mv $i.joe $i ; done for i in `git ls-files | grep "\.[hc]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ }else]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\$[ ]*PetscCall(\([- ._+=a-z0-9A-Z>*,()]*);\)\$\([ ]*\)} \([- ._+=a-z0-9A-Z>*,()]*);\)\$?\1if (\2) PetscCall(\3$\4\5$?g' | tr '$' '\n' | sed 's?ZZZ?$?g' > $i.joe ; mv $i.joe $i ; doneYes, really ugly but Barry still cannot master awkCommit-type: housekeeping
Merge branch 'hzhang/external-matfactor-options' into 'main'Get options in symbolic factorization instead of MatGetFactor() using KSP/PC prefix when inside KSPSee merge request petsc/petsc!5230
Change matrix factor database options that occur in KSP/PC to always use KSP/PC options prefixAdd MatSetOptionsPrefixFactor() and MatAppendOptionsPrefixFactor() to allow controlling the options pre
Change matrix factor database options that occur in KSP/PC to always use KSP/PC options prefixAdd MatSetOptionsPrefixFactor() and MatAppendOptionsPrefixFactor() to allow controlling the options prefixused by factors created from this matrixChange MatSetOptionsPrefix() to no longer affect the options prefix used by factors created from this matrixAs part of the above work the handling of the factor matrix options is now done in code in the factor matrixnot in the code that originates the factor matrixUpdate examples output to the new approach where the factored matrix prefix is set from the KSP/PCMuch of this work was performed by Hong ZhangCommit-type: usability/spend 5h
PCGetDefaultType_Private: avoid normal matrices selecting bjacobi recursively
remove garbage from makefilesIncluding * unused FLAGS variables * All: lib that did not work * stray blank lines etcCommit-type: housekeeping/spend 1h
Docs: bulk add backticks to .seealso man page fields```pythonimport osimport reimport fileinputdef _process_word(word): comma = "," if word.endswith(",") else "" return "`%s`%s" % (wor
Docs: bulk add backticks to .seealso man page fields```pythonimport osimport reimport fileinputdef _process_word(word): comma = "," if word.endswith(",") else "" return "`%s`%s" % (word.rstrip(","), comma)def _process_stripped_line(line): return " ".join(map(_process_word, line.split()))start_pattern = re.compile(r"^( *\.seealso:? )(.*$)")def process_file(filename_full): with fileinput.FileInput(filename_full, inplace=True) as f: in_block = False for line in f: line_stripped = line.strip() # end ".seealso blocks" on a blank line or C-style comment close line_modified = None if not line_stripped: in_block = False elif line_stripped.endswith("*/"): in_block = False else: match = re.match(start_pattern, line) # not stripped line if match: indent = " " * len(match.group(1)) in_block = True line_modified = match.group( 1) + _process_stripped_line( match.group(2).strip()) elif in_block: line_modified = indent + _process_stripped_line( line_stripped) if line_modified: print(line_modified) # prints to the file else: print(line, end="") # prints to the fileBASE_DIRS = ["src", "include"]EXT = [".c", ".cxx", ".cpp", ".cu", ".h", ".hpp", ".hxx"]EXCLUDE_DIRS = ["tests", "tutorials", "ftn-auto", "ftn-custom", "benchmarks"]def main(): """ Process everything """ for base in BASE_DIRS: for root, dirs, files in os.walk(base): for filename in files: if os.path.splitext(filename)[1] in EXT: filename_full = os.path.join(root, filename) print("FILE ---", filename_full) process_file(filename_full) for exclude_dir in EXCLUDE_DIRS: if exclude_dir in dirs: dirs.remove(exclude_dir)if __name__ == "__main__": main()```
Enable PETSC_ATTRIBUTE_FORMAT()
Cleanup of introduction of PetscCall()* remove bogus error flags from XXXBegin()/End() macros such as PetscOptionsBegin()/End()* rename for consistency certain XXXBegin()/End() macros such as Mat
Cleanup of introduction of PetscCall()* remove bogus error flags from XXXBegin()/End() macros such as PetscOptionsBegin()/End()* rename for consistency certain XXXBegin()/End() macros such as MatPreallocateInitialize()/Finalize()* fix many lingering ierr = XXX that arose from multiline function calls* sync slepc/hpddm - to use snapshots with the same changesCommit-type: error-checking, style-fix/spend 8h
Do not wrap PetscTryMethod() PetscUseMethod() in PetscCallIt produces shadow declarations and also serves no purpose since these macros do the appropriate error checking alreadyThere may be addit
Do not wrap PetscTryMethod() PetscUseMethod() in PetscCallIt produces shadow declarations and also serves no purpose since these macros do the appropriate error checking alreadyThere may be additions needed for running with a static error checkerCommit-type: error-checking/spend 15mReported-by:Lisandro Dalcin <dalcinl@gmail.com>
Change a bunch of PetscCheckFalse() to PetscCheck() in pcCommit-type: housekeeping, error-checking/spend 45m
The great renaming:- CHKERRQ() -> PetscCall()- CHKERRV() -> PetscCallVoid()- CHKERRMPI() -> PetscCallMPI()- CHKERRABORT() -> PetscCallAbort()- CHKERRCONTINUE() -> PetscCallContinue()- CHKERRXX
The great renaming:- CHKERRQ() -> PetscCall()- CHKERRV() -> PetscCallVoid()- CHKERRMPI() -> PetscCallMPI()- CHKERRABORT() -> PetscCallAbort()- CHKERRCONTINUE() -> PetscCallContinue()- CHKERRXX() -> PetscCallThrow()- CHKERRCXX() -> PetscCallCXX()- CHKERRCUDA() -> PetscCallCUDA()- CHKERRCUBLAS() -> PetscCallCUBLAS()- CHKERRCUSPARSE() -> PetscCallCUSPARSE()- CHKERRCUSOLVER() -> PetscCallCUSOLVER()- CHKERRCUFFT() -> PetscCallCUFFT()- CHKERRCURAND() -> PetscCallCURAND()- CHKERRHIP() -> PetscCallHIP()- CHKERRHIPBLAS() -> PetscCallHIPBLAS()- CHKERRHIPSOLVER() -> PetscCallHIPSOLVER()- CHKERRQ_CEED() -> PetscCallCEED()- CHKERR_FORTRAN_VOID_FUNCTION() -> PetscCallFortranVoidFunction()- CHKERRMKL() -> PetscCallMKL()- CHKERRMMG() -> PetscCallMMG()- CHKERRMMG_NONSTANDARD() -> PetscCallMMG_NONSTANDARD()- CHKERRCGNS() -> PetscCallCGNS()- CHKERRPTSCOTCH() -> PetscCallPTSCOTCH()- CHKERRSTR() -> PetscCallSTR()- CHKERRTC() -> PetscCallTC()
fixes from recent linter change
pluck ~1000 low hanging PetscCheckFalse() -> PetscCheck() fruit
chkerr and friends wrapped
doc: Fix a variety of manual page formatting issues/spend 1h
batch solver in bjacobi allow batched solver w/o field major ordering, fixed up timers in Landau
rename PetscAssert() -> PetscCheck() and PetscAssertDebug() -> PetscAssert()
add PetscAssert() and PetscAssertFalse()
make PetscInfo() variadic
SETERRQ[1-9]+ begone
Doc: missing 's' in [KSP|PC]SetOperators()
Need to ensure the KSP package is initialized before the call to PetscLogEventDeactivatePush(KSP_Solve)https://gitlab.com/petsc/petsc/-/merge_requests/3320#note_798496459Commit-type: bug-fix\spe
Need to ensure the KSP package is initialized before the call to PetscLogEventDeactivatePush(KSP_Solve)https://gitlab.com/petsc/petsc/-/merge_requests/3320#note_798496459Commit-type: bug-fix\spend 5mReported-by: Pierre Jolivet
Update H2 package
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