mpicusparse - OpenGrok history log for /petsc/src/mat/impls/aij/mpi/mpicusparse

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
97929ea7	22-Oct-2020	Junchao Zhang <jczhang@mcs.anl.gov>	Clean up vecscatter and define it as PetscSF /petsc/.gitignore /petsc/.gitlab-ci.yml /petsc/.gitlab/CODEOWNERS /petsc/CONTRIBUTING /petsc/LICENSE /petsc/README.md /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/ADOLC.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/kokkos-kernels.py /petsc/config/BuildSystem/config/packages/med.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/BuildSystem/logger.py /petsc/config/BuildSystem/script.py /petsc/config/PETSc/Configure.py 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d98d7c49	07-Oct-2020	Stefano Zampini <stefano.zampini@gmail.com>	MATMPIAIJCUSPARSE: fix conversions /petsc/config/BuildSystem/config/packages/revolve.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/examples/arch-ci-linux-c-exodus-dbg.py /petsc/config/petsc_harness.sh /petsc/config/query_tests.py /petsc/gmakefile.test /petsc/include/petsc/private/matimpl.h /petsc/include/petscvec.hpp /petsc/src/dm/impls/plex/plexcreate.c /petsc/src/dm/impls/plex/plexexodusii.c /petsc/src/docs/sphinx_docs/conf.py /petsc/src/docs/sphinx_docs/developers/documentation.rst /petsc/src/docs/sphinx_docs/manual/about_this_manual.rst /petsc/src/docs/sphinx_docs/manual/getting_started.rst /petsc/src/docs/sphinx_docs/manual/index.rst /petsc/src/ksp/ksp/tutorials/ex7.c /petsc/src/ksp/ksp/tutorials/ex71.c /petsc/src/ksp/ksp/tutorials/output/ex71_bddc_elast_deluxe_layers_adapt_cuda_approx.out /petsc/src/ksp/ksp/tutorials/output/ex7_gamg_cuda_nsize-1.out /petsc/src/ksp/ksp/tutorials/output/ex7_gamg_cuda_nsize-2.out /petsc/src/ksp/ksp/tutorials/output/ex7_gamg_kokkos_nsize-1.out /petsc/src/ksp/ksp/tutorials/output/ex7_gamg_kokkos_nsize-2.out /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/gamg/gamg.h /petsc/src/ksp/pc/impls/gamg/geo.c /petsc/src/ksp/pc/impls/gamg/util.c /petsc/src/mat/coarsen/coarsen.c /petsc/src/mat/coarsen/impls/hem/hem.c /petsc/src/mat/coarsen/impls/mis/mis.c /petsc/src/mat/impls/aij/mpi/kokkos/mpiaijkok.kokkos.cxx /petsc/src/mat/impls/aij/mpi/mpiaij.c mpiaijcusparse.cu /petsc/src/mat/impls/aij/mpi/mpimatmatmult.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/aij/seq/inode.c /petsc/src/mat/impls/aij/seq/inode2.c /petsc/src/mat/impls/aij/seq/kokkos/aijkok.kokkos.cxx /petsc/src/mat/impls/aij/seq/matmatmult.c /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/interface/matreg.c /petsc/src/mat/tests/ex2.c /petsc/src/mat/tutorials/ex5cu.cu /petsc/src/mat/utils/matstash.c /petsc/src/snes/tutorials/ex13.c /petsc/src/snes/tutorials/ex3k.kokkos.cxx /petsc/src/snes/tutorials/output/ex13_kokkos.out /petsc/src/vec/vec/impls/seq/bvec2.c /petsc/src/vec/vec/impls/seq/kokkos/veckok.kokkos.cxx /petsc/src/vec/vec/impls/seq/kokkos/veckokkosimpl.hpp /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/interface/vecreg.c /petsc/src/vec/vec/tests/ex26f.F90 /petsc/src/vec/vec/tests/makefile /petsc/src/vec/vec/tests/output/ex26f_1.out
9db3cbf9	01-Oct-2020	Stefano Zampini <stefano.zampini@gmail.com>	Fix building PETSC 3.14 with cuda 10.0 /petsc/.gitlab-ci.yml /petsc/.travis.yml /petsc/CONTRIBUTING /petsc/LICENSE /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/ADOLC.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/ColPack.py /petsc/config/BuildSystem/config/packages/bamg.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/examples/arch-ci-linux-pkgs-cxx-mlib.py /petsc/config/examples/arch-ci-osx-cxx-pkgs-opt.py /petsc/config/examples/arch-olcf-frontier-cuda-beta.py /petsc/include/petsc/finclude/petscvec.h /petsc/include/petsc/private/petscimpl.h /petsc/include/petsc/private/vecimpl.h /petsc/include/petscfe.h /petsc/include/petscvec.h /petsc/include/petscversion.h /petsc/lib/petsc/bin/maint/builddist /petsc/lib/petsc/bin/maint/check-ci-settings.sh 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3fa6b06a	02-Sep-2020	Mark Adams <mfadams@lbl.gov>	add cuda matrix for meta data method, assembly /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/ADIOS.py /petsc/config/BuildSystem/config/packages/ADIOS2.py /petsc/config/BuildSystem/config/packages/AMReX.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/GLVis.py /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/PARTY.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/PaStiX.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/Triangle.py 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fd7c363c	17-Sep-2020	Satish Balay <balay@mcs.anl.gov>	Revert "CUDA: Get PETSc to compile with CUDA 11." This reverts commit 21a6055d1ede0202436f221d06f48a7b9836052d. /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/openmp.py /petsc/config/BuildSystem/config/packages/tetgen.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/BuildSystem/script.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/dataFilesPath.py /petsc/config/examples/arch-ci-linux-cuda-uni-pkgs.py /petsc/config/examples/arch-ci-linux-cuda11.py /petsc/config/examples/arch-ci-linux-cxx-cmplx-pkgs-64idx.py /petsc/config/examples/arch-ci-linux-intel-cmplx.py /petsc/config/examples/arch-ci-linux-pgi.py /petsc/config/examples/arch-ci-mswin-intel-cxx-cmplx.py /petsc/config/examples/arch-ci-mswin-intel.py 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21a6055d	08-Sep-2020	Karl Rupp <me@karlrupp.net>	CUDA: Get PETSc to compile with CUDA 11. CUSPARSE has changed significantly in CUDA 11. This has lead to a lot of broken code. This commit disables the AIJCUSPARSE class so that PETSc at least compi CUDA: Get PETSc to compile with CUDA 11. CUSPARSE has changed significantly in CUDA 11. This has lead to a lot of broken code. This commit disables the AIJCUSPARSE class so that PETSc at least compiles with other GPU features enabled. show more ... /petsc/.gitlab-alcf-ci.yml /petsc/.gitlab-ci.yml /petsc/.gitlab/CODEOWNERS /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/bamg.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/c2html.py /petsc/config/BuildSystem/config/packages/cmake.py /petsc/config/BuildSystem/config/packages/concurrencykit.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/med.py /petsc/config/BuildSystem/config/packages/mpi4py.py 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05035670	19-Aug-2020	Junchao Zhang <jczhang@mcs.anl.gov>	Add support of CUDA/HIP initialization at the same time /petsc/.gitlab-ci.yml /petsc/.readthedocs.yml /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/BuildSystem/config/packages/gmsh.py /petsc/config/BuildSystem/config/packages/hwloc.py /petsc/config/BuildSystem/config/packages/kokkos.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/openmp.py /petsc/config/BuildSystem/config/packages/pragmatic.py /petsc/config/BuildSystem/config/packages/tetgen.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/arch.py /petsc/config/PETSc/options/sharedLibraries.py /petsc/config/examples/arch-ci-linux-cuda-double.py /petsc/config/examples/arch-ci-linux-intel.py /petsc/config/examples/arch-ci-linux-viennacl-cuda.py /petsc/config/examples/arch-ci-linux-viennacl.py /petsc/config/gmakegen.py /petsc/config/gmakegentest.py 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3c4168dc	13-Aug-2020	Satish Balay <balay@mcs.anl.gov>	Merge remote-tracking branch 'origin/maint' /petsc/.gitignore /petsc/.gitlab-alcf-ci.yaml /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/examples/arch-alcfci-theta-cray-opt.py /petsc/config/examples/arch-alcfci-theta-intel-opt.py /petsc/include/petsc/private/cudavecimpl.h /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/petscdsimpl.h /petsc/include/petsc/private/sfimpl.h /petsc/include/petsc/private/taoimpl.h /petsc/include/petscdm.h /petsc/include/petscdmplex.h /petsc/include/petscds.h /petsc/include/petscts.h /petsc/include/petscvec.h /petsc/include/petscviewer.h /petsc/makefile /petsc/src/dm/dt/fe/tests/ex1.c /petsc/src/dm/dt/interface/dtds.c /petsc/src/dm/dt/tests/ex10.c /petsc/src/dm/impls/forest/tests/ex2.c /petsc/src/dm/impls/network/network.c 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303a667b	12-Aug-2020	Satish Balay <balay@mcs.anl.gov>	cudavecimpl.h move to include/petsc/private as its used by private/sfimpl.h Reported-by: Nidish <nb25@rice.edu> /petsc/.gitlab-alcf-ci.yaml /petsc/.gitlab-ci.yml /petsc/.gitlab/CODEOWNERS /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/ADOLC.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/cmake.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/libceed.py /petsc/config/BuildSystem/config/packages/pnetcdf.py 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/petsc/src/ksp/pc/interface/precon.c /petsc/src/ksp/pc/tutorials/ex3.c /petsc/src/mat/f90-mod/petscmat.h90 /petsc/src/mat/impls/aij/mpi/clique/clique.cxx /petsc/src/mat/impls/aij/mpi/mpiaij.c mpicusparsematimpl.h /petsc/src/mat/impls/aij/mpi/mpimatmatmult.c /petsc/src/mat/impls/aij/mpi/mpiov.c /petsc/src/mat/impls/aij/mpi/mpiptap.c /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/aij/seq/aijmkl/aijmkl.c /petsc/src/mat/impls/aij/seq/inode.c /petsc/src/mat/impls/aij/seq/matmatmult.c /petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h /petsc/src/mat/impls/aij/seq/seqviennacl/aijviennacl.cxx /petsc/src/mat/impls/baij/seq/baij2.c /petsc/src/mat/impls/baij/seq/baijfact.c /petsc/src/mat/impls/baij/seq/baijfact11.c /petsc/src/mat/impls/baij/seq/baijfact13.c /petsc/src/mat/impls/baij/seq/baijfact2.c /petsc/src/mat/impls/baij/seq/baijfact5.c /petsc/src/mat/impls/baij/seq/baijfact7.c /petsc/src/mat/impls/baij/seq/baijfact9.c /petsc/src/mat/impls/baij/seq/baijsolv.c /petsc/src/mat/impls/dense/mpi/mmdense.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/dense/seq/cuda/densecuda.cu /petsc/src/mat/impls/dense/seq/cuda/makefile /petsc/src/mat/impls/dense/seq/dense.c /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/fft/fft.c /petsc/src/mat/impls/kaij/kaij.c /petsc/src/mat/impls/maij/maij.c /petsc/src/mat/impls/nest/matnest.c /petsc/src/mat/impls/sbaij/seq/relax.h /petsc/src/mat/impls/sbaij/seq/sbaij.h /petsc/src/mat/impls/sbaij/seq/sbaij2.c /petsc/src/mat/impls/sbaij/seq/sbaijfact.c /petsc/src/mat/impls/sbaij/seq/sbaijfact2.c /petsc/src/mat/impls/sell/mpi/mpisell.h /petsc/src/mat/impls/sell/seq/sell.c /petsc/src/mat/impls/transpose/transm.c /petsc/src/mat/interface/f90-custom/zmatrixf90.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/tests/ex177.c /petsc/src/mat/tests/ex212.c /petsc/src/mat/tests/output/ex212_1.out /petsc/src/mat/utils/gcreate.c /petsc/src/snes/interface/ftn-custom/zsnesf.c /petsc/src/snes/linesearch/impls/bt/linesearchbt.c /petsc/src/snes/tests/ex21f.F90 /petsc/src/snes/tests/makefile /petsc/src/snes/tests/output/ex21f_1.out /petsc/src/snes/tutorials/ex12.c /petsc/src/snes/tutorials/ex46.c /petsc/src/snes/tutorials/ex47cu.cu /petsc/src/snes/tutorials/ex58.c /petsc/src/sys/classes/viewer/impls/binary/binv.c /petsc/src/sys/dll/reg.c /petsc/src/sys/error/adebug.c /petsc/src/sys/error/signal.c /petsc/src/sys/logging/plog.c /petsc/src/sys/makefile /petsc/src/sys/memory/mtr.c /petsc/src/sys/mpiuni/mpi.c /petsc/src/sys/objects/cxx/elemental.cxx /petsc/src/sys/objects/cxx/makefile /petsc/src/sys/objects/init.c /petsc/src/sys/objects/makefile /petsc/src/sys/objects/options.c /petsc/src/sys/objects/pinit.c /petsc/src/sys/tests/ex26.c /petsc/src/sys/tests/ex53.c /petsc/src/sys/tests/makefile /petsc/src/sys/tests/output/ex53_1.out /petsc/src/sys/tutorials/ex4.c /petsc/src/sys/tutorials/ex4f.F 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/petsc/src/ts/tutorials/output/ex20_3.out /petsc/src/ts/tutorials/power_grid/stability_9bus/ex9busadj.c /petsc/src/ts/tutorials/power_grid/stability_9bus/output/ex9busadj_2.out /petsc/src/vec/is/is/utils/iscoloring.c /petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu /petsc/src/vec/vec/impls/seq/seqcuda/makefile /petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c /petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu /petsc/src/vec/vec/impls/seq/seqcuda/vecscattercuda.cu /petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/tests/ex51.c /petsc/src/vec/vec/tests/makefile /petsc/src/vec/vec/tests/output/ex51_1.out /petsc/src/vec/vec/tests/output/ex51_2.out /petsc/src/vec/vscat/impls/mpi1/makefile /petsc/src/vec/vscat/impls/seq/seqvscat.c /petsc/src/vec/vscat/impls/sf/vscatsf.c /petsc/src/vec/vscat/impls/vscat.c /petsc/src/vec/vscat/interface/vscatfce.c
cae85d06	21-Jul-2020	Junchao Zhang <jczhang@mcs.anl.gov>	Do lazy petsc cuda initialization and validation So that we can avoid overburdening the GPU in CI. See more at https://gitlab.com/petsc/petsc/-/issues/360#note_373723821 /petsc/.gitignore /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compile/HC.py /petsc/config/BuildSystem/config/compile/HIP.py /petsc/config/BuildSystem/config/compile/SYCL.py /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/compilersFortran.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/cmake.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/egads.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/hip.py 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3338378c	18-Jun-2020	Stefano Zampini <stefano.zampini@gmail.com>	MATMPIAIJCUSPARSE: add support for MatConvert /petsc/.gitlab-alcf-ci.yaml /petsc/.gitlab-ci.yml /petsc/.gitlab/CODEOWNERS /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/ADOLC.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/MatlabEngine.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/egads.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/BuildSystem/config/packages/thrust.py /petsc/config/BuildSystem/config/setCompilers.py 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cdb0f33d	02-May-2020	Pierre Jolivet <pierre.jolivet@enseeiht.fr>	Single petscdir.mk /petsc/.gitlab-ci.yml /petsc/.gitlab/CODEOWNERS /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/AMReX.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/Triangle.py /petsc/config/BuildSystem/config/packages/blis.py /petsc/config/BuildSystem/config/packages/cmake.py /petsc/config/BuildSystem/config/packages/fblaslapack.py /petsc/config/BuildSystem/config/packages/hpddm.py /petsc/config/BuildSystem/config/packages/hwloc.py /petsc/config/BuildSystem/config/packages/mpfr.py /petsc/config/BuildSystem/config/packages/p4est.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/scalapack.py 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0e03b746	24-Mar-2020	Barry Smith <bsmith@mcs.anl.gov>	build: add more support for not needing to set PETSC_DIR yet build with PETSc, also support for GNU make to directly use "make test" instead of "make -f gmakefile.test" Still needs -include ../petsc build: add more support for not needing to set PETSC_DIR yet build with PETSc, also support for GNU make to directly use "make test" instead of "make -f gmakefile.test" Still needs -include ../petscdir.mk in many of the makefiles Still needs the link for ../petscdir.mk in many directories GNUMakefile: call legacy makefile recursively instead of including it GNUMakefile: promote default "all" target; "libs" builds libpetsc* GNUMakefile: If gnumake < 4.2 prefer makefile wrapper interface over direct gmakefile interface to avoid the following warnings gmakefile.test:92: arch-ci-linux-cxx-cmplx-pkgs-64idx/tests/testfiles: No such file or directory gmakefile:67: arch-ci-linux-cxx-cmplx-pkgs-64idx/lib/petsc/conf/files: No such file or directory Commit-type: testing-fix, feature, usability Thanks-to: Jed Brown jed@jedbrown.org show more ... /petsc/.gitignore /petsc/.readthedocs.yml /petsc/GNUmakefile /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/examples/arch-ci-linux-cuda-single-cxx.py /petsc/config/examples/arch-ci-linux-gcc-quad-64idx-dbg.py /petsc/config/gmakegentest.py /petsc/config/install.py /petsc/config/testparse.py /petsc/gmakefile /petsc/gmakefile.test /petsc/include/petsc/finclude/petscdm.h /petsc/include/petsc/finclude/petscdmplex.h /petsc/include/petsc/finclude/petscksp.h /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/finclude/petscsys.h /petsc/include/petsc/private/dmpleximpl.h 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4d55d066	24-Feb-2020	Junchao Zhang <jczhang@mcs.anl.gov>	Delete out-of-date comments and do better overlap /petsc/.gitlab-ci.yml /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/compilersFortran.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/AMReX.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/CoDiPack.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/adblaslapack.py /petsc/config/BuildSystem/config/packages/blis.py 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b470e4b4	03-Feb-2020	Richard Tran Mills <rmills@rmills.org>	Changed XXXPinToCPU() to XXXBindToCPU() to prevent confusion. The reason for this change is that we already use the terminology "pinned" to refer to memory that is non-pageable, in the context of Pe Changed XXXPinToCPU() to XXXBindToCPU() to prevent confusion. The reason for this change is that we already use the terminology "pinned" to refer to memory that is non-pageable, in the context of PetscSF as well as allocating host memory when GPUs are being employed. show more ... /petsc/.gitignore /petsc/.gitlab-ci.yml /petsc/.gitlab/CODEOWNERS /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/GLVis.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/PaStiX.py 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17403302	24-Sep-2019	Karl Rupp <me@karlrupp.net>	CUDA: Fixed incorrect use of separate streams. This solves synchronization problems that have arisen due to the incorrect use of multiple CUDA streams for vector and matrix operations (without using CUDA: Fixed incorrect use of separate streams. This solves synchronization problems that have arisen due to the incorrect use of multiple CUDA streams for vector and matrix operations (without using proper synchronization mechanisms). In particular, SNES ex19 and ex56 now run reliably (no failure after 20+ reruns). Instead, the default stream (NULL pointer) is now used for all CUDA operations. I don't have performance comparisons at hand for the performance implications in this commit, but expect any changes to be small. Correctness first :-) show more ... /petsc/.gitlab-ci.yml /petsc/.gitlab/CODEOWNERS /petsc/.gitmessage /petsc/config/BuildSystem/config/atomics.py /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/compilersFortran.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/headers.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/SAMRAI.py /petsc/config/BuildSystem/config/packages/cxxlibs.py /petsc/config/BuildSystem/config/packages/flibs.py /petsc/config/BuildSystem/config/packages/hpddm.py 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99acd6aa	22-Sep-2019	Stefano Zampini <stefano.zampini@gmail.com>	Fix compilation error for nvcc in optimized code with AVX-512 (march=native on my GPU workstation) for some reason, the host compiler fails with this error message /home/zampins/Devel/petsc/include/ Fix compilation error for nvcc in optimized code with AVX-512 (march=native on my GPU workstation) for some reason, the host compiler fails with this error message /home/zampins/Devel/petsc/include/../src/mat/impls/aij/seq/aij.h(535): error: identifier "_mm512_reduce_add_pd" is undefined This optimized C kernel is not used in the GPU classes, so it is safe to skip its declaration show more ... /petsc/.gitignore /petsc/.gitlab-ci.yml /petsc/.gitlab/CODEOWNERS /petsc/CONTRIBUTING /petsc/README.md /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compile/Cxx.py /petsc/config/BuildSystem/config/compile/FC.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py 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29ad97fd	07-Aug-2019	Karl Rupp <me@karlrupp.net>	Merge branch 'dalcinl/feature-math' [PR #1904] * dalcinl/feature-math: Math & PetscComplex: Various enhancements - Define PetscXXXScalar to PetscXXXReal for real scalar type - Add PetscCbrtReal(), P Merge branch 'dalcinl/feature-math' [PR #1904] * dalcinl/feature-math: Math & PetscComplex: Various enhancements - Define PetscXXXScalar to PetscXXXReal for real scalar type - Add PetscCbrtReal(), PetscHypotReal(), and PetscAtan2Real() - Add PetscArgComplex() and PetscArgScalar() - Add PetscAtan{Real\|Complex\|Scalar}() - Add PetscA{sin\|cos\|tan}h{Real\|Complex\|Scalar}() - Docs: Petsc{Real\|Imaginary}Part() return PetscReal - Define __fp16 constants to use "F" suffix (ie. single precision) - Fix PETSC_[SQRT_]MACHINE_EPSILON values for __fp16 PetscComplex: Remove PETSC_USE_CXX_COMPLEX_FLOAT_WORKAROUND - Move the C++ complex fixes to its own header file - Define PETSC_SKIP_CXX_COMPLEX_FIX to skip the C++ complex fixes show more ... /petsc/.travis.yml /petsc/bitbucket-pipelines.yml /petsc/include/petsccxxcomplexfix.h /petsc/include/petscmat.h /petsc/include/petscmath.h /petsc/include/petscsystypes.h /petsc/makefile /petsc/src/benchmarks/streams/MPIVersion.c /petsc/src/benchmarks/streams/OpenMPVersion.c /petsc/src/benchmarks/streams/makefile /petsc/src/benchmarks/streams/process.py /petsc/src/dm/examples/tutorials/ex10.c /petsc/src/ksp/ksp/examples/tutorials/ex6.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/examples/tutorials/output/ex6_1.out /petsc/src/ksp/ksp/examples/tutorials/output/ex6_2.out /petsc/src/ksp/ksp/examples/tutorials/output/ex6_3.out /petsc/src/mat/examples/tests/ex234.c /petsc/src/mat/examples/tests/ex28.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex234_1.out /petsc/src/mat/examples/tests/output/ex28_1.out /petsc/src/mat/examples/tests/output/ex28_2.out /petsc/src/mat/examples/tests/output/ex28_3.out mpiaijcusparse.cu /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/seq/sbaij2.c /petsc/src/sys/examples/tests/ex15.c /petsc/src/sys/examples/tests/ex25.c /petsc/src/sys/examples/tests/ex4.c /petsc/src/sys/examples/tests/output/ex25_1.out /petsc/src/vec/is/ao/examples/tests/ex3d/ex3.cxx /petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu /petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu /petsc/src/vec/vec/impls/seq/seqcuda/vecscattercuda.cu
a3fdcf43	05-Aug-2019	Karl Rupp <me@karlrupp.net>	CUDA: Fixed issues in MatSeqAIJCUSPARSEGenerateTransposeForMult and MatMultTransposeAdd_SeqAIJCUSPARSE This is a cherry-pick of commits dde4751, 435e334, 1d884b8, 4e32a5a Thanks-to: Mark Adams <ma23 CUDA: Fixed issues in MatSeqAIJCUSPARSEGenerateTransposeForMult and MatMultTransposeAdd_SeqAIJCUSPARSE This is a cherry-pick of commits dde4751, 435e334, 1d884b8, 4e32a5a Thanks-to: Mark Adams <ma2325@columbia.edu> show more ... /petsc/.gitmessage /petsc/.travis.yml /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/headers.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/ADOLC.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/ColPack.py /petsc/config/BuildSystem/config/packages/MFEM.py 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53800007	05-Aug-2019	Karl Rupp <me@karlrupp.net>	CUDA: Skipping CXX complex fix. Should fix warnings obtained with newer math functions. 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fdc842d1	31-May-2019	Barry Smith <bsmith@mcs.anl.gov>	Various improvements for GPUs (mostly for performance and CUDA) 1) Add VecPinToCPU() for CUDA vector and matrices 2) Move initialization of cuBLAS to PetscInitialize() since it takes 1/2 second and Various improvements for GPUs (mostly for performance and CUDA) 1) Add VecPinToCPU() for CUDA vector and matrices 2) Move initialization of cuBLAS to PetscInitialize() since it takes 1/2 second and distorts timing with -log_view 3) Add logging for DMCreateMatrix (for large meshes this is very large) 4) Add VecGet/RestoreArrayWrite() to prevent unneeded copies from GPU (only implemented so far for CUDA); added a small number of usages in the source so that snes tutorials ex19 does not do unneeded communication from the GPU 5) Automatically convert MAIJ matrices to AIJ for CUDA since they are not yet supported natively in PETSc's CUDA matrix implementation 6) Pinned objects should still use the CUDA/ViennaCL versions of Destroy to clean up the GPU stuff Commit-type: feature show more ... /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/hdf5.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/openblas.py /petsc/config/BuildSystem/config/packages/slepc.py /petsc/config/BuildSystem/config/packages/tetgen.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/arch.py /petsc/config/PETSc/options/petscdir.py /petsc/config/PETSc/options/scalarTypes.py /petsc/config/configure.py /petsc/config/examples/arch-linux-cxx-cmplx-pkgs-64idx.py /petsc/config/examples/arch-linux-pkgs-64idx.py /petsc/include/petsc/private/dmimpl.h /petsc/include/petsc/private/petscfeimpl.h 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d083f849	01-Jun-2019	Barry Smith <bsmith@mcs.anl.gov>	Update the use of Collective on in the manual pages to reflect the new style Commit-type: style-fix, documentation Thanks-to: Patrick Sanan <patrick.sanan@gmail.com> /petsc/.gitignore /petsc/.hgignore /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/MFEM.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/MatlabEngine.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/PaStiX.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py 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/petsc/src/vec/vec/utils/tagger/examples/tutorials/ex1.c /petsc/src/vec/vec/utils/tagger/impls/cdf.c /petsc/src/vec/vec/utils/tagger/interface/tagger.c /petsc/src/vec/vec/utils/tagger/interface/taggerregi.c /petsc/src/vec/vec/utils/vecio.c /petsc/src/vec/vec/utils/vecmpitoseq.c /petsc/src/vec/vec/utils/vinv.c /petsc/src/vec/vscat/examples/ex1.c /petsc/src/vec/vscat/examples/ex2.c /petsc/src/vec/vscat/examples/ex3.c /petsc/src/vec/vscat/examples/ex4.c /petsc/src/vec/vscat/examples/ex5.c /petsc/src/vec/vscat/examples/ex6.c /petsc/src/vec/vscat/examples/ex7.c /petsc/src/vec/vscat/examples/ex9.c /petsc/src/vec/vscat/examples/makefile /petsc/src/vec/vscat/examples/output/ex7_1.out /petsc/src/vec/vscat/examples/output/ex9_1.out /petsc/src/vec/vscat/impls/makefile /petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.c /petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.h /petsc/src/vec/vscat/impls/mpi3/vpscat.c /petsc/src/vec/vscat/impls/mpi3/vpscat.h /petsc/src/vec/vscat/impls/sf/makefile /petsc/src/vec/vscat/impls/sf/vscatsf.c /petsc/src/vec/vscat/impls/vscat.c /petsc/src/vec/vscat/interface/dlregisvecscat.c /petsc/src/vec/vscat/interface/vscatfce.c /petsc/src/vec/vscat/interface/vscreate.c
29302ad0	24-Feb-2019	Karl Rupp <me@karlrupp.net>	Merge branch 'jczhang/fix-vecscatter-cuda/maint' [PR #1388] * jczhang/fix-vecscatter-cuda/maint: CUDA vecscatter needs to take care of the ScatterMode argument /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/include/petscvec.h /petsc/src/dm/impls/da/dacorn.c /petsc/src/dm/impls/da/dadist.c /petsc/src/dm/impls/plex/examples/tests/ex18.c /petsc/src/dm/impls/plex/examples/tests/output/ex18_1_1d_dist1.out /petsc/src/dm/impls/plex/plexgeometry.c /petsc/src/docs/tex/manual/part2.tex mpiaijcusparse.cu /petsc/src/vec/vec/impls/nest/vecnest.c /petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h /petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c /petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu /petsc/src/vec/vec/utils/vecstash.c /petsc/src/vec/vscat/examples/ex6.c /petsc/src/vec/vscat/examples/makefile /petsc/src/vec/vscat/examples/output/ex6_1.out /petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.h /petsc/src/vec/vscat/impls/mpi3/vpscat.h /petsc/src/vec/vscat/interface/vscatfce.c /petsc/src/vec/vscat/interface/vscreate.c
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