Merge branch 'jolivet/housekeeping' into 'main'

Housekeeping

See merge request petsc/petsc!8326

Remove unneeded variable and functions

Merge branch 'barry/2024-05-29/minor-fortran-stub-cleanup' into 'main'

More improvements to Fortran stubs and interfaces

See merge request petsc/petsc!7598

This requires some changes to user FORTRAN code

Pass PETSC_NULL_XXX_ARRAY when passing a NULL as an argument that is expecting an array
Pass PETSC_NULL_ENUM when argument returns an enum instead of

This requires some changes to user FORTRAN code

Pass PETSC_NULL_XXX_ARRAY when passing a NULL as an argument that is expecting an array
Pass PETSC_NULL_ENUM when argument returns an enum instead of PETSC_NULL_INTEGER
Pass arrays (and not scalar values) when the argument is expecting an array; this means replace, for example, the argument v with [v]
Use PetscObjectIsNull(obj) to check if the object is NULL, instead of obj == PETSC_NULL_XXX

The compiler will now automatically prevent you from using the wrong argument type for the first three bullets above
This will also require an update sowing with the new sowing branch this MR is using.

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Merge branch 'jolivet/clang-format-18' into 'main'

clang-format version 18

See merge request petsc/petsc!6902

Remove multiple parentheses and extra semicolon

git grep -l -E "\(\([a-zA-Z0-9_]+\)\(\*[a-zA-Z0-9_]+\)[, )]" | xargs sed -r -i'' 's#\(\(([a-zA-Z0-9_]+)\)\(\*([a-zA-Z0-9_]+)\)([, )])#\(\(\1\)\*\2\3#g

Remove multiple parentheses and extra semicolon

git grep -l -E "\(\([a-zA-Z0-9_]+\)\(\*[a-zA-Z0-9_]+\)[, )]" | xargs sed -r -i'' 's#\(\(([a-zA-Z0-9_]+)\)\(\*([a-zA-Z0-9_]+)\)([, )])#\(\(\1\)\*\2\3#g'
git grep -l -E "Petsc(.)*\(\(\*[a-zA-Z0-9_]*\)," | xargs sed -r -i'' 's#Petsc([a-zA-Z0-9_]*)\(\(\*([a-zA-Z0-9_]*)\), #Petsc\1(*\2, #g'
git grep -l -E "([\!\&\~\*\(]|\)\)|\([^,\*\(]+\**\))\(([a-zA-Z0-9_]+((\.|->)[a-zA-Z0-9_]+|\[[a-zA-Z0-9_ \%\+\*\-]+\])+)\)" | xargs sed -r -i'' 's#([\!\&\~\*\(]|\)\)|\([^,\*\(]+\**\))\(([a-zA-Z0-9_]+((\.|->)[a-zA-Z0-9_]+|\[[a-zA-Z0-9_ \%\+\*\-]+\])+)\)#\1\2#g'

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Merge remote-tracking branch 'origin/release'

Merge branch 'jose/release/bad-compose-function' into 'release'

Fix bad calls to PetscObjectComposeFunction

See merge request petsc/petsc!7187

Fix bad calls to PetscObjectComposeFunction

Seemingly due to copy-paste errors

Merge branch 'jacobf/2023-06-30/enable-doc-lint' into 'main'

Enable docs linting

See merge request petsc/petsc!6667

Lint apply: mat

Merge branch 'barry/2023-03-08/fix-man-pages-detected-by-lint' into 'main'

Fix many manual pages

See merge request petsc/petsc!6162

Fix manual pages based on reports from Jacob's lint tool

Commit-type: documentation

Merge branch 'barry/2023-03-01/fix-mat-man-pages' into 'main'

Cleanup of mat manual pages

See merge request petsc/petsc!6134

Cleanup of mat manual pages

Commit-type: documentation

Merge remote-tracking branch 'origin/release'

Merge branch 'jolivet/fix-typos' into 'release'

Fix Typos

See merge request petsc/petsc!6024

Fix Typos

Merge branch 'jacobf/2022-12-10/petscerrorcode-nodiscard' into 'main'

Feature: Non-discardable PetscErrorCode

See merge request petsc/petsc!5923

Make PetscErrorCode a non-discardable enum

Merge remote-tracking branch 'origin/release'

Merge branch 'stefanozampini-release-patch-42395' into 'release'

fix mkl sbaij

See merge request petsc/petsc!5733

```
In file included from /home/szampini/Devel/petsc/include/petscsys.h:21,
from /home/szampini/Devel/petsc/include/petscvec.h:9,
from /home/szampini/Devel/petsc/inc

```
In file included from /home/szampini/Devel/petsc/include/petscsys.h:21,
from /home/szampini/Devel/petsc/include/petscvec.h:9,
from /home/szampini/Devel/petsc/include/petscmat.h:7,
from /home/szampini/Devel/petsc/include/petsc/private/matimpl.h:5,
from /home/szampini/Devel/petsc/include/../src/mat/impls/baij/seq/baij.h:4,
from /home/szampini/Devel/petsc/src/mat/impls/baij/seq/baijmkl/baijmkl.c:8:
/home/szampini/Devel/petsc/src/mat/impls/baij/seq/baijmkl/baijmkl.c: In function ‘MatSeqBAIJMKL_create_mkl_handle’:
/home/szampini/Devel/petsc/src/mat/impls/baij/seq/baijmkl/baijmkl.c:182:152: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast]
182 | PetscCallMKL(mkl_sparse_x_create_bsr(&baijmkl->bsrA, SPARSE_INDEX_BASE_ONE, SPARSE_LAYOUT_COLUMN_MAJOR, (MKL_INT)mbs, (MKL_INT)nbs, (MKL_INT)bs, (MKL_INT *)i, (MKL_INT *)(ai + 1), (MKL_INT *)aj, aa));
| ^
/home/szampini/Devel/petsc/include/petscmacros.h:566:51: note: in definition of macro ‘PetscUnlikely’
566 | #define PetscUnlikely(cond) __builtin_expect(!!(cond), 0)
| ^~~~
/home/szampini/Devel/petsc/include/../src/mat/impls/baij/seq/baijmkl/baijmkl.h:5:5: note: in expansion of macro ‘PetscCheck’
5 | PetscCheck(stat == SPARSE_STATUS_SUCCESS, PETSC_COMM_SELF, PETSC_ERR_LIB, "Error in MKL sparse matrix call"); \
| ^~~~~~~~~~
/home/szampini/Devel/petsc/src/mat/impls/baij/seq/baijmkl/baijmkl.c:182:7: note: in expansion of macro ‘PetscCallMKL’
182 | PetscCallMKL(mkl_sparse_x_create_bsr(&baijmkl->bsrA, SPARSE_INDEX_BASE_ONE, SPARSE_LAYOUT_COLUMN_MAJOR, (MKL_INT)mbs, (MKL_INT)nbs, (MKL_INT)bs, (MKL_INT *)i, (MKL_INT *)(ai + 1), (MKL_INT *)aj, aa));
| ^~~~~~~~~~~~
/home/szampini/Devel/petsc/src/mat/impls/baij/seq/baijmkl/baijmkl.c:182:20: note: in expansion of macro ‘mkl_sparse_x_create_bsr’
182 | PetscCallMKL(mkl_sparse_x_create_bsr(&baijmkl->bsrA, SPARSE_INDEX_BASE_ONE, SPARSE_LAYOUT_COLUMN_MAJOR, (MKL_INT)mbs, (MKL_INT)nbs, (MKL_INT)bs, (MKL_INT *)i, (MKL_INT *)(ai + 1), (MKL_INT *)aj, aa));
```

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Merge branch 'barry/2022-09-27/fix-mkl-sparse-64bit-int' into 'main'

Update the mkl_sparse interface to handle 64 bit integers

See merge request petsc/petsc!5693

Update the mkl_sparse interface to handle 64 bit integers

Commit-type: portability
Reported-by: Bro H <broheimhelldawg29@gmail.com>