elemental - OpenGrok history log for /petsc/src/mat/impls/elemental

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
1f881ff8	09-Jul-2012	Xuan Zhou <xzhou23@hawk.iit.edu>	Implemented MatNorm_Elemental() and tested in ex170. Minor bug fix in elemental installation. Hg-commit: 2624604f176486c70eb37b6fe382f989aa68f548 /petsc/bin/matlab/classes/examples/tutorials/ex10.m /petsc/config/PETSc/packages/elemental.py /petsc/include/petsc-private/matimpl.h /petsc/include/petscsys.h /petsc/include/sieve/Mesh.hh /petsc/src/mat/examples/tests/ex168.c /petsc/src/mat/examples/tests/ex170.c matelem.cxx /petsc/src/sys/error/errstop.c /petsc/src/sys/error/errtrace.c /petsc/src/sys/memory/mtr.c /petsc/src/sys/objects/init.c /petsc/src/sys/objects/pinit.c
d7c3f9d8	08-Jul-2012	Hong Zhang <hzhang@mcs.anl.gov>	add MatLUFactorSymbolic_Elemental() and MatLUFactorNumeric_Elemental() Hg-commit: d9abcaba0e352c4a5e284f4666967b360edfd8be /petsc/config/builder.py /petsc/src/mat/examples/tests/ex168.c matelem.cxx /petsc/src/snes/examples/tutorials/ex70.c /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/examples/tutorials/output/ex70_0.out /petsc/src/snes/examples/tutorials/output/ex70_1.out
ad880c91	07-Jul-2012	Xuan Zhou <xzhou23@hawk.iit.edu>	LU factor using random matrices Hg-commit: dafd9435948a93dddbbbf9e695322993e35b4df3 /petsc/src/mat/examples/tests/ex168.c matelem.cxx
1293973d	07-Jul-2012	Hong Zhang <hzhang@mcs.anl.gov>	add MatGetFactor_elemental_petsc() Hg-commit: c704a7760798ea1eff29b3722e8be07fc9b3609f /petsc/src/ksp/pc/impls/wb/wb.c /petsc/src/mat/examples/tests/ex168.c matelem.cxx
d6223691	06-Jul-2012	Xuan Zhou <xzhou23@hawk.iit.edu>	Implemented MatLUFactor_Elemental() and MatMatSolve_Elemental() w/ or w/o partial pivoting Hg-commit: cd471b9313e8972bf638b2464e413bb258475dae /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bddc/bddc.h /petsc/src/mat/examples/tests/ex168.c matelem.cxx
bafd5131	06-Jul-2012	Hong Zhang <hzhang@mcs.anl.gov>	trivial update Hg-commit: 4f5acdfaa6ad5be1a3a7e714ee5a01f8f8d46625 /petsc/include/petsc-private/petscimpl.h /petsc/src/dm/impls/mesh/mesh.c /petsc/src/docs/website/index.html /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/mat/examples/tests/ex168.c /petsc/src/mat/impls/aij/mpi/mpiov.c matelem.cxx /petsc/src/mat/interface/matrix.c /petsc/src/snes/interface/snes.c /petsc/src/snes/interface/snesj2.c /petsc/src/sys/draw/interface/dgcoor.c /petsc/src/sys/objects/options.c /petsc/src/ts/interface/ts.c /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/utils/vinv.c
5e9f5b67	06-Jul-2012	Hong Zhang <hzhang@mcs.anl.gov>	Grid needs to be shared between multiple Mats on the same communicator, implement MatCreate_Elemental() by attribute caching on the MPI_Comm Hg-commit: 7b4b1de598b4a72c1776d03ad5a16518f98a0dff /petsc/src/ksp/ksp/examples/tutorials/ex55.c /petsc/src/ksp/pc/impls/gamg/agg.c matelem.cxx matelemimpl.h /petsc/src/snes/examples/tutorials/ex5aspin.c /petsc/src/snes/examples/tutorials/makefile
1f0e42cf	05-Jul-2012	Hong Zhang <hzhang@mcs.anl.gov>	add MatMatSolve_Elemental() Hg-commit: cbfc200536fde0a50b5dbd7554e9f72702cbfad3 /petsc/.dir-locals.el /petsc/.hgignore /petsc/.hgtags /petsc/conf/adic.init /petsc/conf/adicmastercontrol /petsc/conf/adicmf.init /petsc/conf/adicmfb.init /petsc/conf/rules /petsc/conf/test /petsc/conf/variables /petsc/config/PETSc/Configure.py /petsc/config/PETSc/FEM.py /petsc/config/PETSc/__init__.py /petsc/config/PETSc/compilerOptions.py /petsc/config/PETSc/package.py /petsc/config/PETSc/packages/ADIC.py /petsc/config/PETSc/packages/Chaco.py /petsc/config/PETSc/packages/Dscpack.py /petsc/config/PETSc/packages/FFC.py /petsc/config/PETSc/packages/Generator.py /petsc/config/PETSc/packages/MUMPS.py /petsc/config/PETSc/packages/Mathematica.py /petsc/config/PETSc/packages/Matlab.py /petsc/config/PETSc/packages/MatlabEngine.py /petsc/config/PETSc/packages/Numpy.py /petsc/config/PETSc/packages/P3Dlib.py /petsc/config/PETSc/packages/PARTY.py 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7c920d81	03-Jul-2012	Xuan Zhou <xzhou23@hawk.iit.edu>	Implemented MatLUFactor_Elemental() with partial pivoting. 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4ee44ac6	03-Jul-2012	Xuan Zhou <xzhou23@hawk.iit.edu>	MatScale and MatAYPX for elemental matrices Hg-commit: cdc3e400b4fd0729fae3c095feb25dd535318b41 /petsc/src/mat/examples/tests/ex170.c matelem.cxx
ae844d54	03-Jul-2012	Hong Zhang <hzhang@mcs.anl.gov>	prepare for MatLUFactor_Elemental() and MatMatSolve_Elemental() Hg-commit: 51852d86e6b8e8db658fffdceb76d521f5ce9614 /petsc/bin/petscmpiexec /petsc/include/finclude/petscmat.h /petsc/src/ksp/ksp/interface/itcreate.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/mat/examples/tests/ex168.c /petsc/src/mat/examples/tests/makefile matelem.cxx
e09a3074	02-Jul-2012	Hong Zhang <hzhang@mcs.anl.gov>	add MatAYPX to MatOps Hg-commit: b1a4a84143069caf95542bcfe9eb2eb24090f657 /petsc/include/finclude/petscmat.h /petsc/include/petsc-private/matimpl.h /petsc/include/petscmat.h matelem.cxx
9a9e8502	02-Jul-2012	Hong Zhang <hzhang@mcs.anl.gov>	implement MatMatMultSymbolic/Numeric_Elemental() - C=A*B does not share grid with A and B yet. Hg-commit: 8e4c66fd9c646b8b1ecadb25bc9c13b304005e61 /petsc/src/mat/examples/tests/ex170.c /petsc/src/mat/examples/tests/ex38.c /petsc/src/mat/examples/tests/makefile matelem.cxx
65b78793	02-Jul-2012	Xuan Zhou <xzhou23@hawk.iit.edu>	Implemented MatAXPY_Elemental. Example in ex170. Hg-commit: b21c0bf446b3e1ec307dd1f665035e7eb71c865f /petsc/bin/maint/builddist /petsc/config/PETSc/packages/cuda.py /petsc/config/PETSc/packages/elemental.py /petsc/config/PETSc/packages/txpetscgpu.py /petsc/config/builder.py /petsc/config/configure.py /petsc/include/finclude/petscmat.h /petsc/include/finclude/petscmatdef.h /petsc/include/petsc-private/matimpl.h /petsc/include/petsc-private/vecimpl.h /petsc/include/petscmat.h /petsc/include/petscmath.h /petsc/include/petscpc.h /petsc/include/petscsys.h /petsc/makefile /petsc/src/dm/impls/complex/complex.c /petsc/src/dm/impls/da/gr1.c /petsc/src/dm/impls/da/gr2.c /petsc/src/docs/makefile /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/docs/website/features/gpus.html /petsc/src/docs/website/publications/index.html /petsc/src/ksp/ksp/examples/tutorials/ex11.c /petsc/src/ksp/pc/impls/ainvcusp/ainvcusp.cu /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bddc/bddc.h /petsc/src/ksp/pc/impls/bicgstabcusp/bicgstabcusp.cu /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/factor/factor.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/impls/sacusp/sacusp.cu /petsc/src/ksp/pc/impls/sacusp/sacusppoly.cu /petsc/src/mat/examples/tests/ex170.c /petsc/src/mat/impls/aij/mpi/makefile /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpiaij.h /petsc/src/mat/impls/aij/mpi/mpicusp/makefile /petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijAssemble.cu /petsc/src/mat/impls/aij/mpi/mpicusp/mpiaijcusp.cu /petsc/src/mat/impls/aij/mpi/mpicusp/mpicuspmatimpl.h /petsc/src/mat/impls/aij/mpi/mpicusparse/makefile /petsc/src/mat/impls/aij/mpi/mpicusparse/mpiaijcusparse.cu /petsc/src/mat/impls/aij/mpi/mpicusparse/mpicusparsematimpl.h /petsc/src/mat/impls/aij/seq/aij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/aij/seq/aijfact.c /petsc/src/mat/impls/aij/seq/inode.c /petsc/src/mat/impls/aij/seq/makefile /petsc/src/mat/impls/aij/seq/seqcusp/aijAssemble.cu /petsc/src/mat/impls/aij/seq/seqcusp/aijcusp.cu /petsc/src/mat/impls/aij/seq/seqcusp/cuspmatimpl.h /petsc/src/mat/impls/aij/seq/seqcusparse/aijcusparse.cu /petsc/src/mat/impls/aij/seq/seqcusparse/cusparsematimpl.h /petsc/src/mat/impls/aij/seq/seqcusparse/makefile /petsc/src/mat/impls/baij/seq/ftn-kernels/fsolvebaij.F matelem.cxx /petsc/src/mat/interface/dlregismat.c /petsc/src/mat/interface/matregis.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/order/sorder.c /petsc/src/snes/examples/tutorials/ex31.c /petsc/src/snes/examples/tutorials/output/ex31_0.out /petsc/src/snes/examples/tutorials/output/ex31_1.out /petsc/src/snes/impls/ncg/snesncg.c /petsc/src/snes/linesearch/interface/linesearch.c /petsc/src/sys/draw/impls/x/xinit.c /petsc/src/sys/draw/impls/x/xops.c /petsc/src/sys/error/err.c /petsc/src/sys/fileio/fretrieve.c /petsc/src/sys/fileio/ftest.c /petsc/src/sys/fileio/mpiuopen.c /petsc/src/sys/fileio/smatlab.c /petsc/src/sys/python/pythonsys.c /petsc/src/sys/utils/select.c /petsc/src/sys/viewer/impls/ascii/filev.c /petsc/src/sys/viewer/impls/binary/binv.c /petsc/src/ts/examples/tutorials/ex27.c /petsc/src/ts/examples/tutorials/ex2f.F /petsc/src/ts/examples/tutorials/util2.c /petsc/src/vec/pf/impls/string/cstring.c /petsc/src/vec/vec/impls/mpi/mpicusp/mpicusp.cu /petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/utils/veccusp/vscatcusp.c /petsc/src/vec/vec/utils/vinv.c /petsc/src/vec/vec/utils/vpscat.h
aae2c449	28-Jun-2012	Hong Zhang <hzhang@mcs.anl.gov>	add off-proc entries for MatSetValues_Elemental() via cache locally and use Elemental's (collective) "axpy" interface Hg-commit: ac56b09f36ebbcfcef9d454728321f2dc1dc4583 /petsc/src/mat/examples/tests/ex38.c /petsc/src/mat/examples/tests/output/ex38_1.out /petsc/src/mat/examples/tests/output/ex38_2.out matelem.cxx matelemimpl.h
7a063c05	28-Jun-2012	Hong Zhang <hzhang@mcs.anl.gov>	rm '//' Hg-commit: 58f637bb5e6d981d8a8ed6fa577adbde5ce32a5b matelem.cxx
c1d1b975	27-Jun-2012	Xuan Zhou <xzhou23@hawk.iit.edu>	Implemented MatMatMult_Elemental. The test is in ex170.c. It only works for square matrices for now. Running into off-processor MatSetValues errors if I try to create two matrices of different sizes. Implemented MatMatMult_Elemental. The test is in ex170.c. It only works for square matrices for now. Running into off-processor MatSetValues errors if I try to create two matrices of different sizes. Hg-commit: d8e18b803111dbb03e8b3e13dee5bdac0b1ec7be show more ... /petsc/config/PETSc/packages/elemental.py /petsc/src/mat/examples/tests/ex170.c /petsc/src/mat/examples/tests/makefile matelem.cxx
ed36708c	27-Jun-2012	Hong Zhang <hzhang@mcs.anl.gov>	add tests for elemental interface; trivial cleanup matelem.cxx Hg-commit: 07c61a609bed7f3a02c1f05a55846206239f6248 /petsc/.hgignore /petsc/bin/maint/generateetags.py /petsc/bin/petscnagupgrade.py /petsc/bin/pythonscripts/PetscGenerateFEMQuadrature.py /petsc/bin/pythonscripts/PetscGenerateFEMQuadratureTensorProduct.py /petsc/conf/rules /petsc/conf/variables /petsc/config/PETSc/Configure.py /petsc/config/PETSc/package.py /petsc/config/PETSc/packages/elemental.py /petsc/config/builder.py /petsc/config/builder2.py /petsc/config/cmakegen.py /petsc/include/petsc-private/compleximpl.h /petsc/include/petsc-private/dmimpl.h /petsc/include/petsc-private/vecimpl.h /petsc/include/petscdm.h /petsc/include/petscdmcomplex.h /petsc/include/petscdmda.h /petsc/include/petscversion.h /petsc/makefile /petsc/src/dm/impls/adda/adda.c /petsc/src/dm/impls/complex/complex.c /petsc/src/dm/impls/complex/complexcreate.c /petsc/src/dm/impls/complex/complexvtk.c /petsc/src/dm/impls/composite/pack.c /petsc/src/dm/impls/da/dacorn.c /petsc/src/dm/impls/da/dadestroy.c /petsc/src/dm/impls/da/dageometry.c /petsc/src/dm/impls/da/dagetarray.c /petsc/src/dm/impls/da/dalocal.c /petsc/src/dm/impls/da/gr1.c /petsc/src/dm/impls/da/makefile /petsc/src/dm/impls/iga/iga.c /petsc/src/dm/impls/makefile /petsc/src/dm/impls/mesh/mesh.c /petsc/src/dm/impls/redundant/dmredundant.c /petsc/src/dm/impls/shell/dmshell.c /petsc/src/dm/impls/sliced/sliced.c /petsc/src/dm/interface/dm.c /petsc/src/docs/tex/petsc.bib /petsc/src/docs/tex/petscapp.bib /petsc/src/docs/website/documentation/faq.html /petsc/src/docs/website/download/index.html /petsc/src/ksp/ksp/impls/cg/cgne/cgne.c /petsc/src/ksp/ksp/utils/schurm.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/mat/examples/tests/ex38.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/seq/aij.c matelem.cxx /petsc/src/snes/examples/tutorials/ex14.c /petsc/src/snes/examples/tutorials/ex31.c /petsc/src/snes/examples/tutorials/ex45.c /petsc/src/snes/examples/tutorials/ex62.c /petsc/src/snes/examples/tutorials/ex67.c /petsc/src/snes/impls/ngmres/snesngmres.c /petsc/src/snes/interface/snesj2.c /petsc/src/snes/utils/dmsnes.c /petsc/src/sys/error/err.c /petsc/src/sys/error/signal.c /petsc/src/sys/examples/tests/ex12.c /petsc/src/sys/fileio/ftest.c /petsc/src/sys/viewer/interface/view.c /petsc/src/sys/viewer/interface/viewa.c /petsc/src/sys/viewer/interface/viewreg.c /petsc/src/ts/examples/tutorials/ex10.c /petsc/src/ts/examples/tutorials/ex12.c /petsc/src/ts/examples/tutorials/ex13.c /petsc/src/ts/examples/tutorials/ex15.c /petsc/src/ts/examples/tutorials/ex17.c /petsc/src/ts/examples/tutorials/ex26.c /petsc/src/ts/examples/tutorials/ex27.c /petsc/src/ts/examples/tutorials/ex7.c /petsc/src/ts/examples/tutorials/makefile /petsc/src/ts/impls/implicit/gl/gl.c /petsc/src/vec/is/examples/tutorials/makefile /petsc/src/vec/is/utils/isdiff.c /petsc/src/vec/vec/examples/tests/makefile /petsc/src/vec/vec/impls/seq/vsection.c /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/utils/vecio.c
db31f6de	15-Jun-2012	Jed Brown <jed@59A2.org>	Add basic Elemental interface ## Implemented * MatMult and MatMultAdd * MatSetValues for locally owner parts (no stash at this point) * Use MatGetOwnershipIS() to determine which entries a process s Add basic Elemental interface ## Implemented * MatMult and MatMultAdd * MatSetValues for locally owner parts (no stash at this point) * Use MatGetOwnershipIS() to determine which entries a process should be responsible for assembling * Viewing is currently in Elemental ordering, can use MatComputeExplicitOperator() for debugging ## Short-term priorities * Grid needs to be shared between multiple Mats on the same communicator, implement by attribute caching on the MPI_Comm * Stash for assembly of unowned entries, can cache locally and use Elemental's (collective) "axpy" interface * MatMat operations, factorization, etc Hg-commit: 9d1af7db82c9477605dc39b514d53db5a9855fc7 show more ... /petsc/.dir-locals.el /petsc/.hgignore /petsc/.hgtags 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