Merge branch 'suyash/hip' into 'main'

Add HIP support to Mat class in PETSc

See merge request petsc/petsc!5383

Add HIP support to Mat class in PETSc

Co-authored-by: Justin Chang <jychang48@gmail.com>

Fixed-by: Jacob Faibussowitsch <jacob.fai@gmail.com>
Fixed-by: Junchao Zhang <jczhang@mcs.anl.gov>
Fixed-by:

Add HIP support to Mat class in PETSc

Co-authored-by: Justin Chang <jychang48@gmail.com>

Fixed-by: Jacob Faibussowitsch <jacob.fai@gmail.com>
Fixed-by: Junchao Zhang <jczhang@mcs.anl.gov>
Fixed-by: Satish Balay <balay@mcs.anl.gov>

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Merge branch 'jolivet/fix-egrep' into 'main'

Switch from egrep to grep -E

See merge request petsc/petsc!5674

Switch from egrep to grep -E

Merge branch 'jacobf/2022-09-21/2-bike-2-shed' into 'main'

Feature: Bicycle Storage Facility 2

See merge request petsc/petsc!5661

source code format changes due to .clang-format changes

Merge branch 'jacobf/2022-08-29/petscdevicecontext-backend-update' into 'main'

Update PetscDevice and PetscDeviceContext backends

See merge request petsc/petsc!5566

Fix MPI_Comm_attr keyval reference counting, one should be able to free the keyval before deleting communicators

Merge branch 'jolivet/fix-style-one-liners' into 'main'

Remove braces from one-liners

See merge request petsc/petsc!5557

Remove braces from one-liners

Merge branch 'barry/2022-08-21/clang-format-source' into 'main'

format repository with clang-format

See merge request petsc/petsc!5541

clang-format: convert PETSc sources to comply with clang-format

Merge branch 'barry/2022-07-25/print-warning-unused-options-on-error' into 'main'

Print unused options when output error message

See merge request petsc/petsc!5473

Print unused options when output error message

Commit-type: error-checking, feature
/spend 15m
Reported-by: Victor Eijkhout <eijkhout@tacc.utexas.edu>

Merge branch 'barry/2022-07-23/add-petscbeginuser' into 'main'

Add PetscFunctionBeginUser to all PETSc C/C++ examples

See merge request petsc/petsc!5470

Add PetscFunctionBeginUser to all PETSc C/C++ examples

Now the stack frames will contain the main program and the correct line numbers in them

git ls-files | egrep "(tutorials|tests)" | xargs sed -

Add PetscFunctionBeginUser to all PETSc C/C++ examples

Now the stack frames will contain the main program and the correct line numbers in them

git ls-files | egrep "(tutorials|tests)" | xargs sed -i "s?\(PetscCall(PetscInitialize(&argc\)?PetscFunctionBeginUser;\n \1?g"

Commit-type: error-checking, testing-fix
/spend 15m

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Remove PetscFunctionBeginUser; that will be auto-added in the next commit

Merge branch 'barry/2022-06-24/linenumbers-petscstack' into 'main'

Fixes/improvements for PETSc stack handling

See merge request petsc/petsc!5368

Additional work that cannot be merged into previous commit

Add PETSc CI mode to allow better handling of errors and system dependent output when running in test harness

-petsc_ci - automatically set for all runs in test harness

-petsc_ci_portable_error_out

Add PETSc CI mode to allow better handling of errors and system dependent output when running in test harness

-petsc_ci - automatically set for all runs in test harness

-petsc_ci_portable_error_output - ensures all error messages (when possible are system and compiler information),
should be only used in tests that are explicitly testing the error handling

This allows proper comparisons of runs on different machines and when errors are intentionally triggered to test error handling

Commit-type: error-checking, testing-fix
/spend 5h

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Merge branch 'barry/2022-06-13/make-one-line-if-call' into 'main'

Change if () { PetscCall() } three liner to one liner

See merge request petsc/petsc!5344

Change if () { PetscCall() } three liner and friends to one liners

for i in `git ls-files | grep "\.[ch]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ ]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\

Change if () { PetscCall() } three liner and friends to one liners

for i in `git ls-files | grep "\.[ch]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ ]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\$[ ]*PetscCall(\([- ._+=a-z0-9A-Z>*,()]*);\)\$[ ]*}\$?\1if (\2) PetscCall(\3$?g' | tr '$' '\n' | sed 's?ZZZ?$?g' > $i.joe ; mv $i.joe $i ; done

for i in `git ls-files | grep "\.[hc]$"` ; do sed 's?\$?ZZZ?g' $i | tr '\n' '$' | sed 's?\([ }else]*\)if (\([-;,.\*+=a-z0-9A-Z_>]*\)) {\$[ ]*PetscCall(\([- ._+=a-z0-9A-Z>*,()]*);\)\$\([ ]*\)} \([- ._+=a-z0-9A-Z>*,()]*);\)\$?\1if (\2) PetscCall(\3$\4\5$?g' | tr '$' '\n' | sed 's?ZZZ?$?g' > $i.joe ; mv $i.joe $i ; done

Yes, really ugly but Barry still cannot master awk

Commit-type: housekeeping

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Merge remote-tracking branch 'origin/release'

Merge branch 'rmills/fix-ex19-bind-below-test' into 'release'

-dm_bind_below tests now use last field of the -log_view data

See merge request petsc/petsc!5335

-dm_bind_below tests now use last field of the -log_view data

This corrects an issue with the previous version of the tests, which
extracted field number 24 (intended to be "GPU Mflop/s"). In some
c

-dm_bind_below tests now use last field of the -log_view data

This corrects an issue with the previous version of the tests, which
extracted field number 24 (intended to be "GPU Mflop/s"). In some
cases, there would be no space between columns of the -log_view output,
causing awk to extract the wrong value. By telling awk to extract the
last field, it will always use the "GPU %F" measurement, which should
always be zero if -dm_bind_below is working correctly.

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