Merge branch 'barry/2025-07-20/no-petsc-options-make-check' into 'main'

Skip PETSC_OPTIONS with make check

See merge request petsc/petsc!8570

fix bug in network example that produces FPE

change network example to use jacobi preconditioner to prevent FPE in ILU due to zero row of matrix

Merge branch 'hzhang/dmnetworkview-color' into 'main'

Add color component to CoordinateDM

See merge request petsc/petsc!6479

Add color component to CoordinateDM in DMView_Network_CSV()
Add color handling to DMNetwork visualization script
Add check for coordinateDM creation in DMView_Network_CSV()
Update ex1.c:
set couple

Add color component to CoordinateDM in DMView_Network_CSV()
Add color handling to DMNetwork visualization script
Add check for coordinateDM creation in DMView_Network_CSV()
Update ex1.c:
set coupled_snes_max_it=power_snes_max_it=water_snes_max_it=1 to illustrate interaction between subsnes and coupledsnes
set color=localf at vertices to monitor convergence over dmnetwork
optimize UserMonitor()
Update src/dm/impls/network/tests/ex2.c to test '-dmnetwork_view draw'
Co-authored-by: dccampbell1@shockers.wichita.edu

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Merge branch 'dcampbell/add-dmnetworkview-py' into 'main'

Added Matplotlib viewer functionality to DMView

See merge request petsc/petsc!5953

update ex1.c and ex2.c; add tests

Merge branch 'jolivet/feature-rm-spaces-plurals' into 'main'

Remove unneeded spaces/plurals

See merge request petsc/petsc!5193

Remove extra spaces and unwanted plurals

Merge branch 'hzhang/dmnetwork-netcoupling' into 'master'

Hzhang/dmnetwork netcoupling

See merge request petsc/petsc!3051

New design for the coupling of sub-dmnetowrks.
See email discussions on Nov 23, 2019, Subject: Re: petsc | DMNetwork: Update manual. (!2297)
See dev.html for changes made
using sf, DMNetworkVariables

New design for the coupling of sub-dmnetowrks.
See email discussions on Nov 23, 2019, Subject: Re: petsc | DMNetwork: Update manual. (!2297)
See dev.html for changes made
using sf, DMNetworkVariablesSetUp() handles shared vertex easily

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Merge branch 'hzhang/dmnetwk-parallel-create' into 'master'

add tests for parallel creation of dmnetwork

See merge request petsc/petsc!2801

add tests for parallel creation of dmnetwork

Merge branch 'jed/promote-examples-tests-tutorials' [petsc/petsc!2610]

* jed/promote-examples-tests-tutorials:
Promote examples/{tests,tutorials}/ to {tests,tutorials}/

Promote examples/{tests,tutorials}/ to {tests,tutorials}/

This shortens paths and improves consistency between test target names
and paths to the source and output files. Most of the work was
compl

Promote examples/{tests,tutorials}/ to {tests,tutorials}/

This shortens paths and improves consistency between test target names
and paths to the source and output files. Most of the work was
completed by this script, followed by mild cleanup of nonconforming
cases.

for makefile in `git ls-files 'src/*makefile'`; do
if rg -q 'DIRS.*\bexamples\b' $makefile; then
base=$(dirname $makefile)
dirs=$(cd $base/examples && ls -d tests tutorials 2>/dev/null | xargs echo)
perl -pi -e "s#^(DIRS.*)\bexamples\b#\1${dirs}#" $makefile
git rm $base/examples/makefile
for t in $dirs; do
git mv $base/examples/$t $base/
perl -pi -e "s#^(LOCDIR[[:space:]]*=).*#\1 $base/$t/#" $base/$t
done
fi
done

git grep -l -E -z 'examples/(tutorials|tests)' | xargs -0 perl -pi -e 's#examples/(tutorials|tests)#\1#g'
git checkout @ \
src/docs/website/documentation/changes/ \
src/benchmarks/results/

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