Merge branch 'jolivet/clang-format-18' into 'main'

clang-format version 18

See merge request petsc/petsc!6902

Remove trailing whitespace

Merge branch 'adams/gamg-square-graph-true' into 'main'

GAMG: switch the default to using square graph

See merge request petsc/petsc!6923

GAMG: switch the default to using square graph

Merge branch 'adams/snesex56_refactor' into 'main'

Update SNES/tutorials/ex56 with modern use of Plex, a Laplacian test in addition to the elasticity test, and some cleanup of ad hoc code.

See merg

Merge branch 'adams/snesex56_refactor' into 'main'

Update SNES/tutorials/ex56 with modern use of Plex, a Laplacian test in addition to the elasticity test, and some cleanup of ad hoc code.

See merge request petsc/petsc!5814

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Update SNES/tutorials/ex56 with modern use of Plex, a Laplacian test in addition to the elasticity test, and some cleanup of ad hoc code.

Merge branch 'knepley/fix-plex-extrude-orientation' into 'main'

Knepley/fix plex extrude orientation

See merge request petsc/petsc!5430

Fix test output

Merge branch 'barry/2021-11-24/feature-plex-clearer-cells-per-rank' into 'main'

Fix DMView_Plex_ASCII to have clearer indications of what the numbers after i-cells are (per rank)

See merge request

Merge branch 'barry/2021-11-24/feature-plex-clearer-cells-per-rank' into 'main'

Fix DMView_Plex_ASCII to have clearer indications of what the numbers after i-cells are (per rank)

See merge request petsc/petsc!4599

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Fix DMView_Plex_ASCII to have clearer indications of what the numbers after i-cells are (per rank)

Update the test output files

Commit-type: debugability
\spend 45m

Merge branch 'adams/cheby-spd-cg' into 'master'

make cg default for cheby with MAT_SPD

See merge request petsc/petsc!2868

make cg default for cheby with MAT_SPD

Merge branch 'adams/snes-ex56-eigest' into 'master'

cleaning up ex56, eigest matsetblocksize

See merge request petsc/petsc!2870

cleaning up ex56, eigest matsetblocksize

Merge branch 'jed/promote-examples-tests-tutorials' [petsc/petsc!2610]

* jed/promote-examples-tests-tutorials:
Promote examples/{tests,tutorials}/ to {tests,tutorials}/

Promote examples/{tests,tutorials}/ to {tests,tutorials}/

This shortens paths and improves consistency between test target names
and paths to the source and output files. Most of the work was
compl

Promote examples/{tests,tutorials}/ to {tests,tutorials}/

This shortens paths and improves consistency between test target names
and paths to the source and output files. Most of the work was
completed by this script, followed by mild cleanup of nonconforming
cases.

for makefile in `git ls-files 'src/*makefile'`; do
if rg -q 'DIRS.*\bexamples\b' $makefile; then
base=$(dirname $makefile)
dirs=$(cd $base/examples && ls -d tests tutorials 2>/dev/null | xargs echo)
perl -pi -e "s#^(DIRS.*)\bexamples\b#\1${dirs}#" $makefile
git rm $base/examples/makefile
for t in $dirs; do
git mv $base/examples/$t $base/
perl -pi -e "s#^(LOCDIR[[:space:]]*=).*#\1 $base/$t/#" $base/$t
done
fi
done

git grep -l -E -z 'examples/(tutorials|tests)' | xargs -0 perl -pi -e 's#examples/(tutorials|tests)#\1#g'
git checkout @ \
src/docs/website/documentation/changes/ \
src/benchmarks/results/

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