| #
3b78c357
|
| 09-Nov-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' of bitbucket.org:petsc/petsc
|
| #
b21bbd0f
|
| 09-Nov-2015 |
Fande Kong <fdkong.jd@gmail.com> |
Merge remote-tracking branch 'petsc/master' into moved-partitioning-to-pcgasmsetup
|
| #
13cf9f3a
|
| 08-Nov-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/petscoptions-object'
|
| #
de90943d
|
| 07-Nov-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'barry/petscoptions-object' into stefano_zampini/feature-pardiso-schur
|
| #
c5929fdf
|
| 31-Oct-2015 |
Barry Smith <bsmith@mcs.anl.gov> |
Complete update to new PetscOptions interface
|
| #
e1b06f76
|
| 20-May-2015 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/solkx
* master: (6933 commits)
Bib: Added reference
Includegraph: Updated for compatibility with new folder layout.
Add SNESLineSearchReason to fortran inclu
Merge branch 'master' into knepley/solkx
* master: (6933 commits)
Bib: Added reference
Includegraph: Updated for compatibility with new folder layout.
Add SNESLineSearchReason to fortran includes Also truncate names to fit 32 char fortran limit
fix compile warnings /usr/home/balay/petsc.clone-2/src/vec/vec/interface/vector.c:1944: warning: division by zero in '1.0e+0 / 0.' /usr/home/balay/petsc.clone-2/src/ksp/ksp/interface/itfunc.c:508: warning: 'vec_rhs' may be used uninitialized in this function
updated output for new trust region initial size
initial size of the trust region is set as a percent of the norm of the initial guess, it should not be related to the initial norm of the function (which is kind of nuts).
The default bounds for SNESVISetVariableBounds() in the manual page were reversed from correct values
Bib: Added refs
Bib: Update MPICH webpage
Plex: Forgot to close file
removed nonexistent ex46f from makefile test rule
Revert "fixed bad merge into master"
fixed bad merge into master
fix memory leak in mkl_pardiso fix some formatting in mkl_pardiso code
mv runex111 from TESTEXAMPLES_C to TESTEXAMPLES_DATAFILESPATH
Mat+Doc: More Fortran docs
Plex ex3: Run tests with the correct number of field components
Bib: Added TetGen cite
parmetis: make sure 'ldd libparmetis.so' points to the correct libmetis.so that its linked with.
small fix as reported by the nightly test
...
Conflicts:
config/builder.py
show more ...
|
| #
898446f9
|
| 11-Mar-2015 |
Shri Abhyankar <abhyshr@mcs.anl.gov> |
Merge branch 'master' into shri/ts-is-for-differential-variables
Conflicts:
include/petsc-private/tsimpl.h
src/ts/impls/eimex/eimex.c
src/ts/interface/ts.c
|
| #
9c925a2c
|
| 18-Mar-2014 |
Shri <abhyshr@mcs.anl.gov> |
Merge branch 'master' into shri/ts-events
Conflicts:
src/ts/interface/ts.c
|
| #
5f6acfaf
|
| 18-Mar-2014 |
Shri <abhyshr@mcs.anl.gov> |
Merge branch 'master' into shri/feature-dm-circuit
Conflicts:
src/dm/impls/makefile
|
| #
c7ff62de
|
| 13-Jan-2014 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/wirth-fusion-materials
bad manual merge needs to be fixed
this is what happens when branches hang around too long
Conflicts:
src/ts/examples/tutorials/advection-dif
Merge branch 'master' into barry/wirth-fusion-materials
bad manual merge needs to be fixed
this is what happens when branches hang around too long
Conflicts:
src/ts/examples/tutorials/advection-diffusion-reaction/ex10.c
show more ...
|
| #
edbbd480
|
| 10-Dec-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/xcode
|
| #
cd4f0679
|
| 18-Nov-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-dmda-section
* master: (528 commits)
Doc: Fixed configure doc
Nightly summary: Added configure section.
TSSetErrorIfStepFails: fix __FUNCT__
TS: fi
Merge branch 'master' into knepley/feature-dmda-section
* master: (528 commits)
Doc: Fixed configure doc
Nightly summary: Added configure section.
TSSetErrorIfStepFails: fix __FUNCT__
TS: fix for TSGetRHSMats_Private() in the creation of the Arhs and Brhs matrices
protect logging of objects (which uses global variables) with PETSC_USE_LOG
error handler API had been previously changed but this example was not updated to new API.
DMPlex: Fixed bug in coordinate permutation
PetscSection: Doc fix for permutation
Bib: Added Top500 and fixed entry
fun3d: update PetscMallocValidate() usage
bugfix of MatCreateSeqAIJFromTriple() contributed by Nicolas Marsic <nicolas.marsic@montefiore.ulg.ac.be>
bib: rename ref with duplicate key
Webpage: Corrected '-dm_mat_type cusp' to 'dm_mat_type aijcusp'.
completed removing server code that was not removed in previous commit
removed PETSc webserver and configure package files that supported it
Allow calling MatGetBlockSize[s]() before matrix preallocation
SNESLINESEARCHBT: Set the norms when exiting early due to negligible step.
fix outdated PetscOptionsList
SNESQN: only monitor real part of dot product (fails with C++ complex)
Fix for multiple definitions in mat/color/interface/ custom fortran bindings
...
Conflicts:
config/builder.py
include/petscdmplex.h
src/dm/impls/da/dageometry.c
src/dm/impls/plex/examples/tests/ex4.c
src/dm/impls/plex/plex.c
src/dm/impls/plex/plexinterpolate.c
show more ...
|
| #
c4fbd833
|
| 08-Nov-2013 |
Matthew G. Knepley <knepley@gmail.com> |
Merge branch 'master' into knepley/feature-fem-dgspace
* master: (593 commits)
Bib: Added Top500 and fixed entry
fun3d: update PetscMallocValidate() usage
bib: rename ref with duplicate key
Merge branch 'master' into knepley/feature-fem-dgspace
* master: (593 commits)
Bib: Added Top500 and fixed entry
fun3d: update PetscMallocValidate() usage
bib: rename ref with duplicate key
Webpage: Corrected '-dm_mat_type cusp' to 'dm_mat_type aijcusp'.
Allow calling MatGetBlockSize[s]() before matrix preallocation
SNESLINESEARCHBT: Set the norms when exiting early due to negligible step.
SNESQN: only monitor real part of dot product (fails with C++ complex)
Corrected the #include statement in the man pages for the PetscObjectComposedDataSet/Getwhatever routines.
DMPlex: Added doc for DMPlexGetHybridBounds()
winzip: detect if winzip is used to extract petsc.tar.gz and error out.
configure: remove self.archIndependent as its not being used. [it is used to create externalpackages/package/arch dir which is unused]
configure: fix packages using package-dir/PETSC_ARCH as out-of-source-build location Perhaps this should be changed to package-dir/build?
configure: remove dead code previously used to download BuildSystem
configure: check if compilerDefines [and compilerFixes] exist in framework before using them
configure: save/restore reconfigure.py when --with-clean is used
configure: add --with-clean option to delete buildfiles/externalpackages in PETSC_DIR/PETSC_ARCH and potential externalpackages in --with-external-package-dir/PETSC_ARCH
configure: With --with-externalpackages-dir=dir store/build packages in dir/PETSC_ARCH
Add MatSeqSBAIJSetPreallocationCSR()
configure: switch to using PETSC_DIR/PETSC_ARCH/externalpackages by updating package.py to use externalpackages.py as the externalPackagesDirProvider
configure: move dead code configureExternalPackagesDir() from petscdir.py to externalpackagesdir.py Also set PETSC_DIR/PETSC_ARCH/externalpackages as the externalpackagesdir
...
show more ...
|
| #
7737a228
|
| 31-Oct-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
Merge branch 'master' into barry/saws
Conflicts:
src/ksp/pc/impls/gamg/gamg.c
src/sys/classes/viewer/impls/ams/ams.c
src/sys/objects/pinit.c
|
| #
004eb1ce
|
| 20-Oct-2013 |
Jed Brown <jedbrown@mcs.anl.gov> |
Merge branch 'balay/remove-sdir'
__SDIR__ is gone. This is an ABI change (PetscError) so dependent
packages must be recompiled.
* balay/remove-sdir:
__SDIR__: remove remaining traces and documen
Merge branch 'balay/remove-sdir'
__SDIR__ is gone. This is an ABI change (PetscError) so dependent
packages must be recompiled.
* balay/remove-sdir:
__SDIR__: remove remaining traces and document in changes.html
__SDIR__: remove usage of __SDIR__ from PETSc sources.
This merge fixes one instance of __SDIR__ that was added after
'balay/remove-sdir' branched off.
show more ...
|
| #
efca3c55
|
| 29-May-2013 |
Satish Balay <balay@mcs.anl.gov> |
__SDIR__: remove usage of __SDIR__ from PETSc sources.
|
| #
4042b796
|
| 17-Mar-2013 |
Jed Brown <jed@59A2.org> |
Merge branch 'master' into jed/ts-eimex
Sync to include Git conversion, PETSC_EXTERN, and minor API changes.
Conflicts:
src/ts/interface/tsregall.c
|
| #
0298fd71
|
| 08-Feb-2013 |
Barry Smith <bsmith@mcs.anl.gov> |
removed PETSC_NULL from C and Fortran (except declaration in C for backward compatibility). Kept PETSC_NULL_xxx for Fortran
Fixed a few bugs where PETSC_NULL had been used incorrectly.
Hg-commit: 05
removed PETSC_NULL from C and Fortran (except declaration in C for backward compatibility). Kept PETSC_NULL_xxx for Fortran
Fixed a few bugs where PETSC_NULL had been used incorrectly.
Hg-commit: 054705a517d7f4388a8a084415d7478cbe95dff4
show more ...
|
| #
a297a907
|
| 29-Jan-2013 |
Karl Rupp <rupp@mcs.anl.gov> |
Uncrustified src/sys/*
Hg-commit: 9f71677807bad7b55428a6cc0f5ccc5052e91805
|
| #
6c2930d4
|
| 18-Sep-2012 |
Shri Abhyankar <abhyshr@mcs.anl.gov> |
Commit after merge
Hg-commit: 29c41d281e3ece3127c753661dccfd04e452b7f8
|
| #
3e08d2be
|
| 18-Sep-2012 |
Barry Smith <bsmith@mcs.anl.gov> |
removed trailing blanks from source code
added rule rmtrailingblanks accessible via make ACTION=remtrailingblanks tree
Hg-commit: 6e3652165d48aa5f3e94dd66bf607adea6fac27a
|
| #
48fab831
|
| 09-Jul-2012 |
Brad Aagaard <baagaard@usgs.gov> |
Merge
Hg-commit: 8f74ca6da3dda2e92c9063777436a7e360bcc637
|
| #
574034a9
|
| 08-Jul-2012 |
Jed Brown <jed@59A2.org> |
Add -malloc_log_threshold and PetscMallocSetDumpLogThreshold()
Hg-commit: f004e0725884007841f130fd6278d39edc6c6c20
|
| #
0f55b88d
|
| 03-Jul-2012 |
Satish Balay <balay@mcs.anl.gov> |
backout all chmod stuff in bf971ba58125
[but keep diffs to src/mat/impls/aij/mpi/mpimatmatmult.c ]
Hg-commit: 4a812fc1f35496ce2717c7da9ef12ffabbd13258
|
| #
c0174eb7
|
| 03-Jul-2012 |
Mark F. Adams <mark.adams@columbia.edu> |
removed a spurious call to MatSetBlockSize.
Hg-commit: bf971ba58125bd8cf7ceb2a9d0f5cdf27c27cc6a
|