Use GPU event timer instead of CPU timer

- Support CUDA and HIP
- Initialize CUDA event timers along with CUDA
- Update dev changes
- Package-specific includes should not be placed in public include

Use GPU event timer instead of CPU timer

- Support CUDA and HIP
- Initialize CUDA event timers along with CUDA
- Update dev changes
- Package-specific includes should not be placed in public include files.

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Merge remote-tracking branch 'origin/barry/2021-03-28/fix-mpiu-allreduce-mpi-failure'

Fix capture of MPI error code in MPIU_Allreduce()

See merge request petsc/petsc!3777

All MPIU_ functions except MPIU_File return MPI error codes for checking

Update checkbadSource to find use of CHKERRQ with MPIU_ functions

Commit-type: i.e. error-checking, optimization, bug-fix, p

All MPIU_ functions except MPIU_File return MPI error codes for checking

Update checkbadSource to find use of CHKERRQ with MPIU_ functions

Commit-type: i.e. error-checking, optimization, bug-fix, portability-fix, testing-fix, style-fix, feature, documentation, example
Funded-by:
Project:
Time: hours
Reported-by:
Thanks-to:
Development Tools: Vim, Emacs, Eclipse

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Merge branch 'connorjward/add-flamegraph-tool' into 'main'

Add flamegraph generation tool

See merge request petsc/petsc!3607

Add flamegraph generation option to logging output

This commit also adds a Python script to convert the XML logging output
into the same format.

Merge branch 'jolivet/fix-incorrect-chkerrq' into 'master'

CHKERRQ() -> CHKERRMPI()

See merge request petsc/petsc!3637

CHKERRQ() -> CHKERRMPI()

Merge branch 'barry/2020-10-08/fix-mpi-error-codes' into 'master'

Convert MPI error type to PETSc error with string message for all MPI calls

See merge request petsc/petsc!3326

Convert MPI error type to PETSc error with string message for all MPI calls

Now PETSc examples will ONLY return PETSc error codes and never MPI error codes directly so we can understand and post-pro

Convert MPI error type to PETSc error with string message for all MPI calls

Now PETSc examples will ONLY return PETSc error codes and never MPI error codes directly so we can understand and post-process their
errors better.

The test harness will now automatically retry tests that fail with MPI, this may help with Intel MPI that produces
seemingly random failures.

Commit-type: error-checking
/spend 30m

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Merge branch 'barry/2020-10-07/do-not-log-kspsolve-inside-pcsetup' into 'master'

Do not log KSPSolve() and PCApply() from in PCSetUp()

See merge request petsc/petsc!3320

Do not log KSPSolve() and PCApply() from in PCSetUp()

Do not log KSPSetUp() from within KSPSolve()

Commit-type: logging
/spend 90m
Reported-by: Stefano Zampini <stefano.zampini@gmail.com>

Merge branch 'scott/hip-sys-vec' into 'master'

Implementation of HIP for sys and vec packages

See merge request petsc/petsc!3056

Implementation of HIP for sys and vec packages

This implements the vec functionality including tests.
In the sys level, we handle the initialization issues, but it is tested
at the vec level.

Works

Implementation of HIP for sys and vec packages

This implements the vec functionality including tests.
In the sys level, we handle the initialization issues, but it is tested
at the vec level.

Works with ROCm 3.9.

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Merge remote-tracking branch 'origin/release' into master

Merge branch 'jose/release/pgi-20.9-warnings' into 'release'

Fix warnings in NVIDIA compilers (formerly PGI)

See merge request petsc/petsc!3397

Fix warnings in NVIDIA compilers (formerly PGI): unreachable statement

Merge remote-tracking branch 'origin/release' into master

Merge branch 'jczhang/sf-explicit-memtype' into 'release'

Pass memtypes from VecScatter to SF

See merge request petsc/petsc!3324

Add PetscCreatedGpuObjects and revise a warning msg

Merge branch 'jczhang/mat-vec-kokkos' into 'master'

Add vec Kokkos and mat Kokkos

See merge request petsc/petsc!3219

Use PETSC_HAVE_DEVICE when possible

Merge branch 'barry/2020-09-01/fix-with-log-zero' into 'master'

Clean up examples so they run correctly without warnings configured using...

See merge request petsc/petsc!3193

Clean up examples so they run correctly without warnings configured using --with-log=0 and --with-info=0

Make CI pipeline linux job build with these options

Commit-type: testing-fix, style-fix, mai

Clean up examples so they run correctly without warnings configured using --with-log=0 and --with-info=0

Make CI pipeline linux job build with these options

Commit-type: testing-fix, style-fix, maintainability
/spend 1h

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Merge branch 'jczhang/sf-kokkos' into 'master'

Feature: Add a Kokkos backend for PetscSF

See merge request petsc/petsc!3076

Implement sfcuda and sfkokkos as runtime options