Merge branch 'jolivet/no-device-no-petscdevice' into 'main'

Add `--with-devicelanguage` to make PETSc a C library again

Closes #997

See merge request petsc/petsc!8783

PetscDevice: remove C++ dependency when using --with-devicelanguage=C

Merge branch 'jolivet/rm-explicit-empty-output_file' into 'main'

Remove 535 empty .out and consolidate the use of output/empty.out

See merge request petsc/petsc!8538

Minor style fix

Merge branch 'jacobf/2022-10-04/improve-device-test-coverage' into 'main'

Improve coverage of various PetscDevice and PetscDeviceContext corner cases

See merge request petsc/petsc!5712

Allow non-c++ builds to run the device tests

improve coverage of various PetscDevice and PetscDeviceContext corner cases

Merge branch 'jacobf/2022-09-21/2-bike-2-shed' into 'main'

Feature: Bicycle Storage Facility 2

See merge request petsc/petsc!5661

source code format changes due to .clang-format changes

Merge branch 'jacobf/2022-08-29/petscdevicecontext-backend-update' into 'main'

Update PetscDevice and PetscDeviceContext backends

See merge request petsc/petsc!5566

Rework PetscDeviceContext backends and supporting code:
- Add PETSC_DEVICE_HOST
- Add PetscDeviceAllocate()
- Add PetscDeviceMalloc()
- Add PetscDeviceDeallocate()
- Add PetscDeviceFree()
- Add Petsc

Rework PetscDeviceContext backends and supporting code:
- Add PETSC_DEVICE_HOST
- Add PetscDeviceAllocate()
- Add PetscDeviceMalloc()
- Add PetscDeviceDeallocate()
- Add PetscDeviceFree()
- Add PetscDeviceMemcopy()
- Add PetscDeviceArraycopy()

- Split petscdevice.h into petscdevice_cuda.h and petscdevice_hip.h
- Add petscdevice_cupm.h
- Extend cupm::Interface and cupm::BlasInterface classes
- Add more C++ utility wrappers

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Merge branch 'barry/2022-08-21/clang-format-source' into 'main'

format repository with clang-format

See merge request petsc/petsc!5541

clang-format: convert PETSc sources to comply with clang-format

Merge branch 'barry/2022-07-23/add-petscbeginuser' into 'main'

Add PetscFunctionBeginUser to all PETSc C/C++ examples

See merge request petsc/petsc!5470

Add PetscFunctionBeginUser to all PETSc C/C++ examples

Now the stack frames will contain the main program and the correct line numbers in them

git ls-files | egrep "(tutorials|tests)" | xargs sed -

Add PetscFunctionBeginUser to all PETSc C/C++ examples

Now the stack frames will contain the main program and the correct line numbers in them

git ls-files | egrep "(tutorials|tests)" | xargs sed -i "s?\(PetscCall(PetscInitialize(&argc\)?PetscFunctionBeginUser;\n \1?g"

Commit-type: error-checking, testing-fix
/spend 15m

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Merge branch 'jacobf/2022-02-23/variadic-chkerr' into 'main'

Variadic CHKERRQ()

See merge request petsc/petsc!4889

The great renaming:

- CHKERRQ() -> PetscCall()
- CHKERRV() -> PetscCallVoid()
- CHKERRMPI() -> PetscCallMPI()
- CHKERRABORT() -> PetscCallAbort()
- CHKERRCONTINUE() -> PetscCallContinue()
- CHKERRXX

The great renaming:

- CHKERRQ() -> PetscCall()
- CHKERRV() -> PetscCallVoid()
- CHKERRMPI() -> PetscCallMPI()
- CHKERRABORT() -> PetscCallAbort()
- CHKERRCONTINUE() -> PetscCallContinue()
- CHKERRXX() -> PetscCallThrow()
- CHKERRCXX() -> PetscCallCXX()
- CHKERRCUDA() -> PetscCallCUDA()
- CHKERRCUBLAS() -> PetscCallCUBLAS()
- CHKERRCUSPARSE() -> PetscCallCUSPARSE()
- CHKERRCUSOLVER() -> PetscCallCUSOLVER()
- CHKERRCUFFT() -> PetscCallCUFFT()
- CHKERRCURAND() -> PetscCallCURAND()
- CHKERRHIP() -> PetscCallHIP()
- CHKERRHIPBLAS() -> PetscCallHIPBLAS()
- CHKERRHIPSOLVER() -> PetscCallHIPSOLVER()
- CHKERRQ_CEED() -> PetscCallCEED()
- CHKERR_FORTRAN_VOID_FUNCTION() -> PetscCallFortranVoidFunction()
- CHKERRMKL() -> PetscCallMKL()
- CHKERRMMG() -> PetscCallMMG()
- CHKERRMMG_NONSTANDARD() -> PetscCallMMG_NONSTANDARD()
- CHKERRCGNS() -> PetscCallCGNS()
- CHKERRPTSCOTCH() -> PetscCallPTSCOTCH()
- CHKERRSTR() -> PetscCallSTR()
- CHKERRTC() -> PetscCallTC()

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PetscInitialize() and PetscFinalize() wrapped:

- ierr = PetscInitialize();if (ierr) return ierr;
+ CHKERRQ(PetscInitialize());

- ierr = PetscFinalize();
- return ierr;
+ CHKERRQ(PetscFinalize());
+

PetscInitialize() and PetscFinalize() wrapped:

- ierr = PetscInitialize();if (ierr) return ierr;
+ CHKERRQ(PetscInitialize());

- ierr = PetscFinalize();
- return ierr;
+ CHKERRQ(PetscFinalize());
+ return 0;

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chkerr and friends wrapped

Merge branch 'jacobf/2022-02-26/disable-no-device-tests' into 'main'

Disable no device tests

See merge request petsc/petsc!4901

disable tests for no device as it breaks ci intermittently

Merge branch 'jacobf/2022-01-05/c99' into 'main'

Feature: C99 and C++11

See merge request petsc/petsc!4700

make PetscDevice now rely on PETSC_HAVE_CXX rather than PETSC_HAVE_CXX_DIALECT_CXX11

Merge branch 'jczhang/feature-kokkos-sycl' into 'main'

Add Kokkos SYCL support

See merge request petsc/petsc!4562

Sys: add sycl device