Merge branch 'barry/2026-01-13/ftn-generation-for-context-functions' into 'main'

Fortran generation of interface definitions for functions that take and return context variables (void *ctx and PetC

Merge branch 'barry/2026-01-13/ftn-generation-for-context-functions' into 'main'

Fortran generation of interface definitions for functions that take and return context variables (void *ctx and PetCtx ctx)

See merge request petsc/petsc!8956

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Add automatic generated fortran support for setting and returning contexts

Major cleanup of the code for setting and returning application (previously called user) contexts
- PetscCtx ctx is now t

Add automatic generated fortran support for setting and returning contexts

Major cleanup of the code for setting and returning application (previously called user) contexts
- PetscCtx ctx is now the standard for passing in contexts
- PetscCtxRt ctx is the standard for passing out contexts, including context destroy routines based on PetscCtxDestroyFn

Both of these are typedef to void*

Also removed most use of user and userctx for context arguments now consistently named ctx

Improved documentation on PetscCtx and PetscCtxRt and on how to use contexts (including getting them) from Fortran

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Merge remote-tracking branch 'origin/release'

Merge branch 'jolivet/fix-docstrings' into 'release'

Fix wrong docstrings

See merge request petsc/petsc!8589

Fix wrong docstrings

Merge branch 'jacobf/2023-08-09/linter-detect-static-function-candidates' into 'main'

Linter detect possible static functions

See merge request petsc/petsc!6796

Linter now tries to detect functions that could be static, and makes it so.

Merge branch 'jacobf/2023-07-19/lint-apply-ts' into 'main'

Manual linter fixes: ts

See merge request petsc/petsc!6736

Fix bug in self-referential docstring checks

Merge branch 'jacobf/2023-06-30/enable-doc-lint' into 'main'

Enable docs linting

See merge request petsc/petsc!6667

Fix flip-flop in seealso alignment check

Make header guessing slightly more robust against 'for example'-style false positives

Fix indent-check not being made when switching sections

Fix duplicate seealso entries bug, it should catch duplicates even if one or the other is not enclosed by backticks!

Allow [](ch_whatever) constructs to not be enclosed by backticks

Support in-out parameter descriptions

Merge branch 'jacobf/2023-03-09/linter-support-deprecated-since-version' into 'main'

Support Level: deprecated (since MAJOR.MINOR[.PATCH]) in the linter

Closes #1337

See merge request petsc/petsc!

Merge branch 'jacobf/2023-03-09/linter-support-deprecated-since-version' into 'main'

Support Level: deprecated (since MAJOR.MINOR[.PATCH]) in the linter

Closes #1337

See merge request petsc/petsc!6165

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Support Level: deprecated (since MAJOR.MINOR[.PATCH]) in the linter

Merge branch 'jacobf/2023-02-08/misc-linter-bugfixes' into 'main'

Miscellaneous Linter Bugfixes

See merge request petsc/petsc!6035

Update test files

Merge branch 'jacobf/2021-10-11/clang-linter-parse-docstrings' into 'main'

Feature: Lint Sowing Docstrings

See merge request petsc/petsc!4443

Reshuffle linter code into a proper python package

Upgrade clang linter:
- Improved stability of clang library calls
- clang linter can now check docstrings for correctness
- Major improvements to d

Reshuffle linter code into a proper python package

Upgrade clang linter:
- Improved stability of clang library calls
- clang linter can now check docstrings for correctness
- Major improvements to diff merging
- Handle overlapping deletion by discarding one patch or the other, patches now support
callbacks to remove themselves from the linter if discarded
- Better duplicate and missing function argument detection
- Improve printing and diagnostics for functions
- Add checks for duplicate headers, non-lowercase levels, spacing between docstring and
symbol, indentation, title-cased headings, no content on comment begin and end lines
- Add better checking for sowing identifier matching
- Tests now can also output and diff:
- stdout (useful for when tests should catch errors but can't fix them)
- Fixed errors
- Now able to apply multiline patches, and far more robust diff support
- Add a lot more auto fixits
- Add new SourceLocation and SourceRange wrappers
- Major performance improvements in __lt__ and __ge__ from caching for SourceLocation and SourceRange
- check that function has a custom fortran interface if it has a function pointer and char
string
- Check that parameter lists start with the right character and
- Source fixes now applied in chronological order, and test that patches can be applied as well

- Improved parameter list alignment checker
- Add support for additional notes types and unknown/unhandled sections
- Allow disabling of diagnostics via '-fdiagnostic-name [yes/no/maybe-so]'
- enum docstring checking and better parameter-list alignment enforcement
- Check spacing in inline lists
- Check for duplicates and self-references in seealso lists
- Detect headers that are missing a colon, and detect headers that probably shouldn't be headers
- Dheck that synopsis descriptions aren't overly long-winded
- Handle inline code-block within parameter lists because snes.c is a nightmare
- Check explicit synopses contain the right parameters
- Added check to explicit macro docstrings on whether the symbol they claim to describe
exists in the header
- Improve diagnostic for matching argument idx
- Show trace back to parent arguments if applicable
- 10x performance improvements for SourceRange and SourceLocation
- Be able to handle arbitrary number of nested function-pointer parameters as documentation
- Rework initial loader, use lazy loading to improve startup time

Update dir-locals.el to reflect new 2 column indentation, and enforce no stars in comments

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