xref: /petsc/include/petscdmswarm.h (revision 0619917b5a674bb687c64e7daba2ab22be99af31)
1 #ifndef PETSCDMSWARM_H
2 #define PETSCDMSWARM_H
3 
4 #include <petscdm.h>
5 #include <petscdt.h>
6 
7 /* SUBMANSEC = DMSwarm */
8 
9 /*E
10    DMSwarmType - Defines the type of `DMSWARM`
11 
12    Values:
13 +  `DMSWARM_BASIC` - defines N entries of varied data-types which the user may register.
14 -  `DMSWARM_PIC` - suitable for particle-in-cell methods. Configured as `DMSWARM_PIC`, the swarm will be aware of, another `DM` which serves as the background mesh.
15    Fields specific to particle-in-cell methods are registered by default. These include spatial coordinates, a unique identifier, a cell index and an index for
16    the owning rank. The background mesh will (by default) define the spatial decomposition of the points defined in the swarm. `DMSWARM_PIC` provides support
17    for particle-in-cell operations such as defining initial point coordinates, communicating particles between sub-domains, projecting particle data fields on to the mesh.
18 
19    Level: beginner
20 
21 .seealso: `DMSWARM`, `DMSwarmSetType()`
22 E*/
23 typedef enum {
24   DMSWARM_BASIC = 0,
25   DMSWARM_PIC
26 } DMSwarmType;
27 
28 typedef enum {
29   DMSWARM_MIGRATE_BASIC = 0,
30   DMSWARM_MIGRATE_DMCELLNSCATTER,
31   DMSWARM_MIGRATE_DMCELLEXACT,
32   DMSWARM_MIGRATE_USER
33 } DMSwarmMigrateType;
34 
35 typedef enum {
36   DMSWARM_COLLECT_BASIC = 0,
37   DMSWARM_COLLECT_DMDABOUNDINGBOX,
38   DMSWARM_COLLECT_GENERAL,
39   DMSWARM_COLLECT_USER
40 } DMSwarmCollectType;
41 
42 /*E
43    DMSwarmPICLayoutType - Defines the method used to define particle coordinates within each cell. The layouts are constructured using the reference cell geometry
44 
45    Values:
46 +  `DMSWARMPIC_LAYOUT_REGULAR` - defines points on a regular ijk mesh. When using `DMSWARMPIC_LAYOUT_REGULAR`, the fill_param defines the number of points in each spatial direction.
47 .  `DMSWARMPIC_LAYOUT_GAUSS` -  defines points using an npoint Gauss-Legendre tensor product quadrature rule.
48    When using `DMSWARMPIC_LAYOUT_GAUSS`, the fill_param defines the number of quadrature points in each spatial direction.
49 
50 -  `DMSWARMPIC_LAYOUT_SUBDIVISION` - defines points on the centroid of a sub-divided reference cell.
51    When using `DMSWARMPIC_LAYOUT_SUBDIVISION`, the fill_param defines the number times the reference cell is sub-divided.
52 
53    Level: beginner
54 
55 .seealso: `DMSWARM`, `DM`, `DMSwarmInsertPointsUsingCellDM()`
56 E*/
57 typedef enum {
58   DMSWARMPIC_LAYOUT_REGULAR = 0,
59   DMSWARMPIC_LAYOUT_GAUSS,
60   DMSWARMPIC_LAYOUT_SUBDIVISION
61 } DMSwarmPICLayoutType;
62 
63 PETSC_EXTERN const char *DMSwarmTypeNames[];
64 PETSC_EXTERN const char *DMSwarmMigrateTypeNames[];
65 PETSC_EXTERN const char *DMSwarmCollectTypeNames[];
66 
67 PETSC_EXTERN const char DMSwarmField_pid[];
68 PETSC_EXTERN const char DMSwarmField_rank[];
69 PETSC_EXTERN const char DMSwarmPICField_coor[];
70 PETSC_EXTERN const char DMSwarmPICField_cellid[];
71 
72 PETSC_EXTERN PetscErrorCode DMSwarmCreateGlobalVectorFromField(DM, const char[], Vec *);
73 PETSC_EXTERN PetscErrorCode DMSwarmDestroyGlobalVectorFromField(DM, const char[], Vec *);
74 PETSC_EXTERN PetscErrorCode DMSwarmCreateLocalVectorFromField(DM, const char[], Vec *);
75 PETSC_EXTERN PetscErrorCode DMSwarmDestroyLocalVectorFromField(DM, const char[], Vec *);
76 
77 PETSC_EXTERN PetscErrorCode DMSwarmInitializeFieldRegister(DM);
78 PETSC_EXTERN PetscErrorCode DMSwarmFinalizeFieldRegister(DM);
79 PETSC_EXTERN PetscErrorCode DMSwarmSetLocalSizes(DM, PetscInt, PetscInt);
80 PETSC_EXTERN PetscErrorCode DMSwarmRegisterPetscDatatypeField(DM, const char[], PetscInt, PetscDataType);
81 PETSC_EXTERN PetscErrorCode DMSwarmRegisterUserStructField(DM, const char[], size_t);
82 PETSC_EXTERN PetscErrorCode DMSwarmRegisterUserDatatypeField(DM, const char[], size_t, PetscInt);
83 PETSC_EXTERN PetscErrorCode DMSwarmGetField(DM, const char[], PetscInt *, PetscDataType *, void **);
84 PETSC_EXTERN PetscErrorCode DMSwarmRestoreField(DM, const char[], PetscInt *, PetscDataType *, void **);
85 
86 PETSC_EXTERN PetscErrorCode DMSwarmVectorDefineField(DM, const char[]);
87 
88 PETSC_EXTERN PetscErrorCode DMSwarmAddPoint(DM);
89 PETSC_EXTERN PetscErrorCode DMSwarmAddNPoints(DM, PetscInt);
90 PETSC_EXTERN PetscErrorCode DMSwarmRemovePoint(DM);
91 PETSC_EXTERN PetscErrorCode DMSwarmRemovePointAtIndex(DM, PetscInt);
92 PETSC_EXTERN PetscErrorCode DMSwarmCopyPoint(DM dm, PetscInt, PetscInt);
93 
94 PETSC_EXTERN PetscErrorCode DMSwarmGetLocalSize(DM, PetscInt *);
95 PETSC_EXTERN PetscErrorCode DMSwarmGetSize(DM, PetscInt *);
96 PETSC_EXTERN PetscErrorCode DMSwarmGetMigrateType(DM, DMSwarmMigrateType *);
97 PETSC_EXTERN PetscErrorCode DMSwarmSetMigrateType(DM, DMSwarmMigrateType);
98 PETSC_EXTERN PetscErrorCode DMSwarmMigrate(DM, PetscBool);
99 
100 PETSC_EXTERN PetscErrorCode DMSwarmCollectViewCreate(DM);
101 PETSC_EXTERN PetscErrorCode DMSwarmCollectViewDestroy(DM);
102 PETSC_EXTERN PetscErrorCode DMSwarmSetCellDM(DM, DM);
103 PETSC_EXTERN PetscErrorCode DMSwarmGetCellDM(DM, DM *);
104 
105 PETSC_EXTERN PetscErrorCode DMSwarmSetType(DM, DMSwarmType);
106 
107 PETSC_EXTERN PetscErrorCode DMSwarmSetPointsUniformCoordinates(DM, PetscReal *, PetscReal *, PetscInt *, InsertMode);
108 PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinates(DM, PetscInt, PetscReal *, PetscBool, InsertMode);
109 PETSC_EXTERN PetscErrorCode DMSwarmInsertPointsUsingCellDM(DM, DMSwarmPICLayoutType, PetscInt);
110 PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinatesCellwise(DM, PetscInt, PetscReal *);
111 PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinatesRandom(DM, PetscInt);
112 PETSC_EXTERN PetscErrorCode DMSwarmViewFieldsXDMF(DM, const char *, PetscInt, const char **);
113 PETSC_EXTERN PetscErrorCode DMSwarmViewXDMF(DM, const char *);
114 
115 PETSC_EXTERN PetscErrorCode DMSwarmSortGetAccess(DM);
116 PETSC_EXTERN PetscErrorCode DMSwarmSortRestoreAccess(DM);
117 PETSC_EXTERN PetscErrorCode DMSwarmSortGetPointsPerCell(DM, PetscInt, PetscInt *, PetscInt **);
118 PETSC_EXTERN PetscErrorCode DMSwarmSortGetNumberOfPointsPerCell(DM, PetscInt, PetscInt *);
119 PETSC_EXTERN PetscErrorCode DMSwarmSortGetIsValid(DM, PetscBool *);
120 PETSC_EXTERN PetscErrorCode DMSwarmSortGetSizes(DM, PetscInt *, PetscInt *);
121 
122 PETSC_EXTERN PetscErrorCode DMSwarmProjectFields(DM, PetscInt, const char **, Vec **, PetscBool);
123 PETSC_EXTERN PetscErrorCode DMSwarmCreateMassMatrixSquare(DM, DM, Mat *);
124 
125 PETSC_EXTERN PetscErrorCode DMSwarmGetCellSwarm(DM, PetscInt, DM);
126 PETSC_EXTERN PetscErrorCode DMSwarmRestoreCellSwarm(DM, PetscInt, DM);
127 PETSC_EXTERN PetscErrorCode DMSwarmGetNumSpecies(DM, PetscInt *);
128 PETSC_EXTERN PetscErrorCode DMSwarmSetNumSpecies(DM, PetscInt);
129 PETSC_EXTERN PetscErrorCode DMSwarmGetCoordinateFunction(DM, PetscErrorCode (**)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *));
130 PETSC_EXTERN PetscErrorCode DMSwarmSetCoordinateFunction(DM, PetscErrorCode (*)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *));
131 PETSC_EXTERN PetscErrorCode DMSwarmGetVelocityFunction(DM, PetscErrorCode (**)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *));
132 PETSC_EXTERN PetscErrorCode DMSwarmSetVelocityFunction(DM, PetscErrorCode (*)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *));
133 PETSC_EXTERN PetscErrorCode DMSwarmComputeLocalSize(DM, PetscInt, PetscProbFunc);
134 PETSC_EXTERN PetscErrorCode DMSwarmComputeLocalSizeFromOptions(DM);
135 PETSC_EXTERN PetscErrorCode DMSwarmInitializeCoordinates(DM);
136 PETSC_EXTERN PetscErrorCode DMSwarmInitializeVelocities(DM, PetscProbFunc, const PetscReal[]);
137 PETSC_EXTERN PetscErrorCode DMSwarmInitializeVelocitiesFromOptions(DM, const PetscReal[]);
138 
139 #endif
140