xref: /petsc/include/petscdmswarm.h (revision 0e02354e4efb6ae7920bb0e7d191735ccbbd1e1e)
1 #if !defined(PETSCDMSWARM_H)
2 #define PETSCDMSWARM_H
3 
4 #include <petscdm.h>
5 #include <petscdt.h>
6 
7 /* SUBMANSEC = DMSwarm */
8 
9 /*E
10    DMSwarmType - Defines the type of swarm
11 
12    DMSWARM_BASIC defines N entries of varied data-types which the user may register.
13 
14    DMSWARM_PIC is suitable for particle-in-cell methods. Configured as DMSWARM_PIC, the swarm will be aware of, another DM which serves as the background mesh.
15    Fields specific to particle-in-cell methods are registered by default. These include spatial coordinates, a unique identifier, a cell index and an index for
16    the owning rank. The background mesh will (by default) define the spatial decomposition of the points defined in the swarm. DMSWARM_PIC provides support
17    for particle-in-cell operations such as defining initial point coordinates, communicating particles between sub-domains, projecting particle data fields on to the mesh.
18 
19    Level: beginner
20 
21 .seealso: `DMSwarmSetType()`
22 E*/
23 typedef enum {
24   DMSWARM_BASIC=0,
25   DMSWARM_PIC
26 } DMSwarmType;
27 
28 typedef enum {
29   DMSWARM_MIGRATE_BASIC=0,
30   DMSWARM_MIGRATE_DMCELLNSCATTER,
31   DMSWARM_MIGRATE_DMCELLEXACT,
32   DMSWARM_MIGRATE_USER
33 } DMSwarmMigrateType;
34 
35 typedef enum {
36   DMSWARM_COLLECT_BASIC=0,
37   DMSWARM_COLLECT_DMDABOUNDINGBOX,
38   DMSWARM_COLLECT_GENERAL,
39   DMSWARM_COLLECT_USER
40 } DMSwarmCollectType;
41 
42 /*E
43    DMSwarmPICLayoutType - Defines the method used to define particle coordinates within each cell. The layouts are constructured using the reference cell geometry
44 
45    DMSWARMPIC_LAYOUT_REGULAR defines points on a regular ijk mesh.
46    When using DMSWARMPIC_LAYOUT_REGULAR, the fill_param defines the number of points in each spatial direction.
47 
48    DMSWARMPIC_LAYOUT_GAUSS defines points using an npoint Gauss-Legendre tensor product quadrature rule.
49    When using DMSWARMPIC_LAYOUT_GAUSS, the fill_param defines the number of quadrature points in each spatial direction.
50 
51    DMSWARMPIC_LAYOUT_SUBDIVISION defines points on the centroid of a sub-divided reference cell.
52    When using DMSWARMPIC_LAYOUT_SUBDIVISION, the fill_param defines the number times the reference cell is sub-divided.
53 
54    Level: beginner
55 
56 .seealso `DMSwarmInsertPointsUsingCellDM()`
57 E*/
58 typedef enum {
59   DMSWARMPIC_LAYOUT_REGULAR=0,
60   DMSWARMPIC_LAYOUT_GAUSS,
61   DMSWARMPIC_LAYOUT_SUBDIVISION
62 } DMSwarmPICLayoutType;
63 
64 PETSC_EXTERN const char* DMSwarmTypeNames[];
65 PETSC_EXTERN const char* DMSwarmMigrateTypeNames[];
66 PETSC_EXTERN const char* DMSwarmCollectTypeNames[];
67 
68 PETSC_EXTERN const char DMSwarmField_pid[];
69 PETSC_EXTERN const char DMSwarmField_rank[];
70 PETSC_EXTERN const char DMSwarmPICField_coor[];
71 PETSC_EXTERN const char DMSwarmPICField_cellid[];
72 
73 PETSC_EXTERN PetscErrorCode DMSwarmCreateGlobalVectorFromField(DM,const char[],Vec*);
74 PETSC_EXTERN PetscErrorCode DMSwarmDestroyGlobalVectorFromField(DM,const char[],Vec*);
75 PETSC_EXTERN PetscErrorCode DMSwarmCreateLocalVectorFromField(DM,const char[],Vec*);
76 PETSC_EXTERN PetscErrorCode DMSwarmDestroyLocalVectorFromField(DM,const char[],Vec*);
77 
78 PETSC_EXTERN PetscErrorCode DMSwarmInitializeFieldRegister(DM);
79 PETSC_EXTERN PetscErrorCode DMSwarmFinalizeFieldRegister(DM);
80 PETSC_EXTERN PetscErrorCode DMSwarmSetLocalSizes(DM,PetscInt,PetscInt);
81 PETSC_EXTERN PetscErrorCode DMSwarmRegisterPetscDatatypeField(DM,const char[],PetscInt,PetscDataType);
82 PETSC_EXTERN PetscErrorCode DMSwarmRegisterUserStructField(DM,const char[],size_t);
83 PETSC_EXTERN PetscErrorCode DMSwarmRegisterUserDatatypeField(DM,const char[],size_t,PetscInt);
84 PETSC_EXTERN PetscErrorCode DMSwarmGetField(DM,const char[],PetscInt*,PetscDataType*,void**);
85 PETSC_EXTERN PetscErrorCode DMSwarmRestoreField(DM,const char[],PetscInt*,PetscDataType*,void**);
86 
87 PETSC_EXTERN PetscErrorCode DMSwarmVectorDefineField(DM,const char[]);
88 
89 PETSC_EXTERN PetscErrorCode DMSwarmAddPoint(DM);
90 PETSC_EXTERN PetscErrorCode DMSwarmAddNPoints(DM,PetscInt);
91 PETSC_EXTERN PetscErrorCode DMSwarmRemovePoint(DM);
92 PETSC_EXTERN PetscErrorCode DMSwarmRemovePointAtIndex(DM,PetscInt);
93 PETSC_EXTERN PetscErrorCode DMSwarmCopyPoint(DM dm,PetscInt,PetscInt);
94 
95 PETSC_EXTERN PetscErrorCode DMSwarmGetLocalSize(DM,PetscInt*);
96 PETSC_EXTERN PetscErrorCode DMSwarmGetSize(DM,PetscInt*);
97 PETSC_EXTERN PetscErrorCode DMSwarmMigrate(DM,PetscBool);
98 
99 PETSC_EXTERN PetscErrorCode DMSwarmCollectViewCreate(DM);
100 PETSC_EXTERN PetscErrorCode DMSwarmCollectViewDestroy(DM);
101 PETSC_EXTERN PetscErrorCode DMSwarmSetCellDM(DM,DM);
102 PETSC_EXTERN PetscErrorCode DMSwarmGetCellDM(DM,DM*);
103 
104 PETSC_EXTERN PetscErrorCode DMSwarmSetType(DM,DMSwarmType);
105 
106 PETSC_EXTERN PetscErrorCode DMSwarmSetPointsUniformCoordinates(DM,PetscReal*,PetscReal*,PetscInt*,InsertMode);
107 PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinates(DM,PetscInt,PetscReal*,PetscBool,InsertMode);
108 PETSC_EXTERN PetscErrorCode DMSwarmInsertPointsUsingCellDM(DM,DMSwarmPICLayoutType,PetscInt);
109 PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinatesCellwise(DM,PetscInt,PetscReal*);
110 PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinatesRandom(DM,PetscInt);
111 PETSC_EXTERN PetscErrorCode DMSwarmViewFieldsXDMF(DM,const char*,PetscInt,const char**);
112 PETSC_EXTERN PetscErrorCode DMSwarmViewXDMF(DM,const char*);
113 
114 PETSC_EXTERN PetscErrorCode DMSwarmSortGetAccess(DM);
115 PETSC_EXTERN PetscErrorCode DMSwarmSortRestoreAccess(DM);
116 PETSC_EXTERN PetscErrorCode DMSwarmSortGetPointsPerCell(DM,PetscInt,PetscInt*,PetscInt**);
117 PETSC_EXTERN PetscErrorCode DMSwarmSortGetNumberOfPointsPerCell(DM,PetscInt,PetscInt*);
118 PETSC_EXTERN PetscErrorCode DMSwarmSortGetIsValid(DM,PetscBool*);
119 PETSC_EXTERN PetscErrorCode DMSwarmSortGetSizes(DM,PetscInt*,PetscInt*);
120 
121 PETSC_EXTERN PetscErrorCode DMSwarmProjectFields(DM,PetscInt,const char**,Vec**,PetscBool);
122 PETSC_EXTERN PetscErrorCode DMSwarmCreateMassMatrixSquare(DM,DM,Mat*);
123 
124 PETSC_EXTERN PetscErrorCode DMSwarmGetCellSwarm(DM, PetscInt, DM);
125 PETSC_EXTERN PetscErrorCode DMSwarmRestoreCellSwarm(DM, PetscInt, DM);
126 PETSC_EXTERN PetscErrorCode DMSwarmGetNumSpecies(DM, PetscInt*);
127 PETSC_EXTERN PetscErrorCode DMSwarmSetNumSpecies(DM, PetscInt);
128 PETSC_EXTERN PetscErrorCode DMSwarmGetCoordinateFunction(DM, PetscErrorCode (**)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *));
129 PETSC_EXTERN PetscErrorCode DMSwarmSetCoordinateFunction(DM, PetscErrorCode (*)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *));
130 PETSC_EXTERN PetscErrorCode DMSwarmGetVelocityFunction(DM, PetscErrorCode (**)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *));
131 PETSC_EXTERN PetscErrorCode DMSwarmSetVelocityFunction(DM, PetscErrorCode (*)(PetscInt, PetscReal, const PetscReal[], PetscInt, PetscScalar[], void *));
132 PETSC_EXTERN PetscErrorCode DMSwarmComputeLocalSize(DM, PetscInt, PetscProbFunc);
133 PETSC_EXTERN PetscErrorCode DMSwarmComputeLocalSizeFromOptions(DM);
134 PETSC_EXTERN PetscErrorCode DMSwarmInitializeCoordinates(DM);
135 PETSC_EXTERN PetscErrorCode DMSwarmInitializeVelocities(DM, PetscProbFunc, const PetscReal[]);
136 PETSC_EXTERN PetscErrorCode DMSwarmInitializeVelocitiesFromOptions(DM, const PetscReal[]);
137 
138 #endif
139