xref: /petsc/include/petscdmswarm.h (revision a01d01fa3fdd0823377c6ff796306a39b7cfc3fd)
1 #if !defined(PETSCDMSWARM_H)
2 #define PETSCDMSWARM_H
3 
4 #include <petscdm.h>
5 #include <petscdt.h>
6 
7 /*E
8    DMSwarmType - Defines the type of swarm
9 
10    DMSWARM_BASIC defines N entries of varied data-types which the user may register.
11 
12    DMSWARM_PIC is suitable for particle-in-cell methods. Configured as DMSWARM_PIC, the swarm will be aware of, another DM which serves as the background mesh. Fields specific to particle-in-cell methods are registered by default. These include spatial coordinates, a unique identifier, a cell index and an index for the owning rank. The background mesh will (by default) define the spatial decomposition of the points defined in the swarm. DMSWARM_PIC provides support for particle-in-cell operations such as defining initial point coordinates, communicating particles between sub-domains, projecting particle data fields on to the mesh.
13 
14    Level: beginner
15 
16 .seealso: DMSwarmSetType()
17 E*/
18 typedef enum {
19   DMSWARM_BASIC=0,
20   DMSWARM_PIC
21 } DMSwarmType;
22 
23 typedef enum {
24   DMSWARM_MIGRATE_BASIC=0,
25   DMSWARM_MIGRATE_DMCELLNSCATTER,
26   DMSWARM_MIGRATE_DMCELLEXACT,
27   DMSWARM_MIGRATE_USER
28 } DMSwarmMigrateType;
29 
30 typedef enum {
31   DMSWARM_COLLECT_BASIC=0,
32   DMSWARM_COLLECT_DMDABOUNDINGBOX,
33   DMSWARM_COLLECT_GENERAL,
34   DMSWARM_COLLECT_USER
35 } DMSwarmCollectType;
36 
37 /*E
38    DMSwarmPICLayoutType - Defines the method used to define particle coordinates within each cell. The layouts are constructured using the reference cell geometry
39 
40    DMSWARMPIC_LAYOUT_REGULAR defines points on a regular ijk mesh.
41    When using DMSWARMPIC_LAYOUT_REGULAR, the fill_param defines the number of points in each spatial direction.
42 
43    DMSWARMPIC_LAYOUT_GAUSS defines points using an npoint Gauss-Legendre tensor product quadrature rule.
44    When using DMSWARMPIC_LAYOUT_GAUSS, the fill_param defines the number of quadrature points in each spatial direction.
45 
46    DMSWARMPIC_LAYOUT_SUBDIVISION defines points on the centroid of a sub-divided reference cell.
47    When using DMSWARMPIC_LAYOUT_SUBDIVISION, the fill_param defines the number times the reference cell is sub-divided.
48 
49    Level: beginner
50 
51 .seealso DMSwarmInsertPointsUsingCellDM()
52 E*/
53 typedef enum {
54   DMSWARMPIC_LAYOUT_REGULAR=0,
55   DMSWARMPIC_LAYOUT_GAUSS,
56   DMSWARMPIC_LAYOUT_SUBDIVISION
57 } DMSwarmPICLayoutType;
58 
59 PETSC_EXTERN const char* DMSwarmTypeNames[];
60 PETSC_EXTERN const char* DMSwarmMigrateTypeNames[];
61 PETSC_EXTERN const char* DMSwarmCollectTypeNames[];
62 
63 PETSC_EXTERN const char DMSwarmField_pid[];
64 PETSC_EXTERN const char DMSwarmField_rank[];
65 PETSC_EXTERN const char DMSwarmPICField_coor[];
66 PETSC_EXTERN const char DMSwarmPICField_cellid[];
67 
68 PETSC_EXTERN PetscErrorCode DMSwarmCreateGlobalVectorFromField(DM,const char[],Vec*);
69 PETSC_EXTERN PetscErrorCode DMSwarmDestroyGlobalVectorFromField(DM,const char[],Vec*);
70 PETSC_EXTERN PetscErrorCode DMSwarmCreateLocalVectorFromField(DM,const char[],Vec*);
71 PETSC_EXTERN PetscErrorCode DMSwarmDestroyLocalVectorFromField(DM,const char[],Vec*);
72 
73 PETSC_EXTERN PetscErrorCode DMSwarmInitializeFieldRegister(DM);
74 PETSC_EXTERN PetscErrorCode DMSwarmFinalizeFieldRegister(DM);
75 PETSC_EXTERN PetscErrorCode DMSwarmSetLocalSizes(DM,PetscInt,PetscInt);
76 PETSC_EXTERN PetscErrorCode DMSwarmRegisterPetscDatatypeField(DM,const char[],PetscInt,PetscDataType);
77 PETSC_EXTERN PetscErrorCode DMSwarmRegisterUserStructField(DM,const char[],size_t);
78 PETSC_EXTERN PetscErrorCode DMSwarmRegisterUserDatatypeField(DM,const char[],size_t,PetscInt);
79 PETSC_EXTERN PetscErrorCode DMSwarmGetField(DM,const char[],PetscInt*,PetscDataType*,void**);
80 PETSC_EXTERN PetscErrorCode DMSwarmRestoreField(DM,const char[],PetscInt*,PetscDataType*,void**);
81 
82 PETSC_EXTERN PetscErrorCode DMSwarmVectorDefineField(DM,const char[]);
83 
84 PETSC_EXTERN PetscErrorCode DMSwarmAddPoint(DM);
85 PETSC_EXTERN PetscErrorCode DMSwarmAddNPoints(DM,PetscInt);
86 PETSC_EXTERN PetscErrorCode DMSwarmRemovePoint(DM);
87 PETSC_EXTERN PetscErrorCode DMSwarmRemovePointAtIndex(DM,PetscInt);
88 PETSC_EXTERN PetscErrorCode DMSwarmCopyPoint(DM dm,PetscInt,PetscInt);
89 
90 PETSC_EXTERN PetscErrorCode DMSwarmGetLocalSize(DM,PetscInt*);
91 PETSC_EXTERN PetscErrorCode DMSwarmGetSize(DM,PetscInt*);
92 PETSC_EXTERN PetscErrorCode DMSwarmMigrate(DM,PetscBool);
93 
94 PETSC_EXTERN PetscErrorCode DMSwarmCollectViewCreate(DM);
95 PETSC_EXTERN PetscErrorCode DMSwarmCollectViewDestroy(DM);
96 PETSC_EXTERN PetscErrorCode DMSwarmSetCellDM(DM,DM);
97 PETSC_EXTERN PetscErrorCode DMSwarmGetCellDM(DM,DM*);
98 
99 PETSC_EXTERN PetscErrorCode DMSwarmSetType(DM,DMSwarmType);
100 
101 PETSC_EXTERN PetscErrorCode DMSwarmSetPointsUniformCoordinates(DM,PetscReal*,PetscReal*,PetscInt*,InsertMode);
102 PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinates(DM,PetscInt,PetscReal*,PetscBool,InsertMode);
103 PETSC_EXTERN PetscErrorCode DMSwarmInsertPointsUsingCellDM(DM,DMSwarmPICLayoutType,PetscInt);
104 PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinatesCellwise(DM,PetscInt,PetscReal*);
105 PETSC_EXTERN PetscErrorCode DMSwarmSetPointCoordinatesRandom(DM,PetscInt);
106 PETSC_EXTERN PetscErrorCode DMSwarmViewFieldsXDMF(DM,const char*,PetscInt,const char**);
107 PETSC_EXTERN PetscErrorCode DMSwarmViewXDMF(DM,const char*);
108 
109 PETSC_EXTERN PetscErrorCode DMSwarmSortGetAccess(DM);
110 PETSC_EXTERN PetscErrorCode DMSwarmSortRestoreAccess(DM);
111 PETSC_EXTERN PetscErrorCode DMSwarmSortGetPointsPerCell(DM,PetscInt,PetscInt*,PetscInt**);
112 PETSC_EXTERN PetscErrorCode DMSwarmSortGetNumberOfPointsPerCell(DM,PetscInt,PetscInt*);
113 PETSC_EXTERN PetscErrorCode DMSwarmSortGetIsValid(DM,PetscBool*);
114 PETSC_EXTERN PetscErrorCode DMSwarmSortGetSizes(DM,PetscInt*,PetscInt*);
115 
116 PETSC_EXTERN PetscErrorCode DMSwarmProjectFields(DM,PetscInt,const char**,Vec**,PetscBool);
117 PETSC_EXTERN PetscErrorCode DMSwarmCreateMassMatrixSquare(DM,DM,Mat*);
118 
119 PETSC_EXTERN PetscErrorCode DMSwarmGetCellSwarm(DM, PetscInt, DM);
120 PETSC_EXTERN PetscErrorCode DMSwarmRestoreCellSwarm(DM, PetscInt, DM);
121 PETSC_EXTERN PetscErrorCode DMSwarmGetNumSpecies(DM, PetscInt*);
122 PETSC_EXTERN PetscErrorCode DMSwarmSetNumSpecies(DM, PetscInt);
123 PETSC_EXTERN PetscErrorCode DMSwarmComputeLocalSize(DM, PetscInt, PetscProbFunc);
124 PETSC_EXTERN PetscErrorCode DMSwarmComputeLocalSizeFromOptions(DM);
125 PETSC_EXTERN PetscErrorCode DMSwarmInitializeCoordinates(DM);
126 PETSC_EXTERN PetscErrorCode DMSwarmInitializeVelocities(DM, PetscProbFunc, const PetscReal[]);
127 PETSC_EXTERN PetscErrorCode DMSwarmInitializeVelocitiesFromOptions(DM, const PetscReal[]);
128 
129 #endif
130