examples - OpenGrok history log for /honee/examples

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e07531f7	12-Jul-2024	James Wright <james@jameswright.xyz>	refactor: More consistent naming of qf context navierstokes.c /honee/include/honee-file.h /honee/include/navierstokes.h /honee/problems/advection.c /honee/problems/bc_freestream.c /honee/problems/bc_slip.c /honee/problems/blasius.c /honee/problems/channel.c /honee/problems/densitycurrent.c /honee/problems/eulervortex.c /honee/problems/gaussianwave.c /honee/problems/newtonian.c /honee/problems/sgs_dd_model.c /honee/problems/shocktube.c /honee/problems/stg_shur14.c /honee/problems/taylorgreen.c /honee/qfunctions/advection.h /honee/qfunctions/bc_slip.h /honee/qfunctions/blasius.h /honee/qfunctions/eulervortex.h /honee/qfunctions/newtonian.h /honee/qfunctions/shocktube.h /honee/qfunctions/stg_shur14.h /honee/src/differential_filter.c /honee/src/honee-file.c /honee/src/misc.c /honee/src/setupdm.c /honee/src/setuplibceed.c /honee/src/smartsim/sgs_dd_training.c /honee/src/turb_spanstats.c /honee/src/velocity_gradient_projection.c
db90dbaa	12-Jul-2024	James Wright <james@jameswright.xyz>	refactor: Remove SetupICsFromBinary - Only used once, might as well just directly call HoneeLoadBinaryVec /honee/README.md navierstokes.c /honee/include/honee-file.h /honee/include/navierstokes.h /honee/src/honee-file.c /honee/src/misc.c /honee/src/setupts.c
ae2b091f	26-Jun-2024	James Wright <james@jameswright.xyz>	chore: Move to Apache-2.0 OR BSD-2-Clause /honee/CHANGELOG.md /honee/LICENSE-APACHE /honee/LICENSE-BSD /honee/common.mk conv_test.sh navierstokes.c stdoutParsing.py /honee/include/bc_definition.h /honee/include/log_events.h /honee/include/mat-ceed-impl.h /honee/include/mat-ceed.h /honee/include/navierstokes.h /honee/include/petsc-ceed-utils.h /honee/include/petsc-ceed.h /honee/include/petsc_ops.h /honee/include/sgs_model_torch.h /honee/include/smartsim.h /honee/problems/advection.c /honee/problems/bc_freestream.c /honee/problems/bc_slip.c /honee/problems/blasius.c /honee/problems/channel.c /honee/problems/densitycurrent.c /honee/problems/eulervortex.c /honee/problems/gaussianwave.c /honee/problems/newtonian.c /honee/problems/sgs_dd_model.c /honee/problems/sgs_model_torch_weak.c /honee/problems/shocktube.c /honee/problems/stg_shur14.c /honee/problems/stg_shur14.h /honee/problems/taylorgreen.c /honee/problems/torch/sgs_model_torch.cpp /honee/pytorch_pkgconfig.py /honee/qfunctions/advection.h /honee/qfunctions/advection_types.h /honee/qfunctions/bc_freestream.h /honee/qfunctions/bc_freestream_type.h /honee/qfunctions/bc_slip.h /honee/qfunctions/blasius.h /honee/qfunctions/channel.h /honee/qfunctions/densitycurrent.h /honee/qfunctions/differential_filter.h /honee/qfunctions/differential_filter_enums.h /honee/qfunctions/eulervortex.h /honee/qfunctions/gaussianwave.h /honee/qfunctions/grid_anisotropy_tensor.h /honee/qfunctions/inverse_multiplicity.h /honee/qfunctions/mass.h /honee/qfunctions/newtonian.h /honee/qfunctions/newtonian_state.h /honee/qfunctions/newtonian_types.h /honee/qfunctions/riemann_solver.h /honee/qfunctions/setupgeo.h /honee/qfunctions/setupgeo2d.h /honee/qfunctions/setupgeo_helpers.h /honee/qfunctions/sgs_dd_model.h /honee/qfunctions/sgs_dd_training.h /honee/qfunctions/sgs_dd_utils.h /honee/qfunctions/shocktube.h /honee/qfunctions/stabilization.h /honee/qfunctions/stabilization_types.h /honee/qfunctions/stg_shur14.h /honee/qfunctions/stg_shur14_type.h /honee/qfunctions/strong_boundary_conditions.h /honee/qfunctions/taylorgreen.h /honee/qfunctions/turb_spanstats.h /honee/qfunctions/turb_stats_types.h /honee/qfunctions/utils.h /honee/qfunctions/utils_eigensolver_jacobi.h /honee/qfunctions/velocity_gradient_projection.h /honee/src/bc_definition.c /honee/src/boundary_condition.c /honee/src/cloptions.c /honee/src/differential_filter.c /honee/src/dm_utils.c /honee/src/grid_anisotropy_tensor.c /honee/src/inverse_multiplicity.c /honee/src/log_events.c /honee/src/mat-ceed.c /honee/src/misc.c /honee/src/petsc_ops.c /honee/src/qdata.c /honee/src/setupdm.c /honee/src/setuplibceed.c /honee/src/setupts.c /honee/src/smartsim/sgs_dd_training.c /honee/src/smartsim/smartsim.c /honee/src/smartsim_weak.c /honee/src/strong_boundary_conditions.c /honee/src/turb_spanstats.c /honee/src/velocity_gradient_projection.c
a29281c9	08-Jul-2024	James Wright <james@jameswright.xyz>	fix: Change ViewerDestroy to match new PETSc changes Based on changes from https://gitlab.com/petsc/petsc/-/merge_requests/7667 navierstokes.c
0ded6df5	02-Jul-2024	James Wright <james@jameswright.xyz>	Merge branch 'jrwrigh/fix_malloc_issues' into 'main' Fix memory leaks Closes #2 See merge request phypid/honee!18 /honee/.gitlab-ci.yml navierstokes.c /honee/include/mat-ceed.h /honee/problems/advection.c /honee/problems/blasius.c /honee/problems/eulervortex.c /honee/problems/newtonian.c /honee/problems/sgs_dd_model.c /honee/problems/stg_shur14.c /honee/src/differential_filter.c /honee/src/grid_anisotropy_tensor.c /honee/src/mat-ceed.c /honee/src/misc.c /honee/src/setuplibceed.c /honee/src/strong_boundary_conditions.c /honee/src/turb_spanstats.c /honee/src/velocity_gradient_projection.c
a35b15c9	01-Jul-2024	James Wright <james@jameswright.xyz>	fix: turb_spanstats leak navierstokes.c /honee/problems/advection.c /honee/problems/eulervortex.c /honee/problems/newtonian.c /honee/src/setuplibceed.c /honee/src/strong_boundary_conditions.c /honee/src/turb_spanstats.c
7fadd0e2	29-Jun-2024	James Wright <james@jameswright.xyz>	fix: Correct path for mesh in vortexshedding.yaml /honee/doc/theory.md vortexshedding.yaml
5ba826a2	28-Jun-2024	James Wright <james@jameswright.xyz>	chore: Move dd_sgs_data to examples dd_sgs_data/OutScaling.dat dd_sgs_data/b1.dat dd_sgs_data/b2.dat dd_sgs_data/w1.dat dd_sgs_data/w2.dat navierstokes.c
149fb536	28-Jun-2024	James Wright <james@jameswright.xyz>	chore: Move navierstokes.* out of root directory navierstokes.h to include and navierstokes.c into examples /honee/Makefile navierstokes.c /honee/include/navierstokes.h /honee/problems/advection.c /honee/problems/bc_freestream.c /honee/problems/bc_slip.c /honee/problems/blasius.c /honee/problems/channel.c /honee/problems/densitycurrent.c /honee/problems/eulervortex.c /honee/problems/gaussianwave.c /honee/problems/newtonian.c /honee/problems/sgs_dd_model.c /honee/problems/shocktube.c /honee/problems/stg_shur14.c /honee/problems/stg_shur14.h /honee/problems/taylorgreen.c /honee/src/boundary_condition.c /honee/src/cloptions.c /honee/src/differential_filter.c /honee/src/dm_utils.c /honee/src/grid_anisotropy_tensor.c /honee/src/inverse_multiplicity.c /honee/src/misc.c /honee/src/petsc_ops.c /honee/src/qdata.c /honee/src/setupdm.c /honee/src/setuplibceed.c /honee/src/setupts.c /honee/src/smartsim/sgs_dd_training.c /honee/src/smartsim/smartsim.c /honee/src/smartsim_weak.c /honee/src/strong_boundary_conditions.c /honee/src/turb_spanstats.c /honee/src/velocity_gradient_projection.c /honee/tests/junit.py
fc37ad8c	28-Jun-2024	James Wright <james@jameswright.xyz>	chore: Move yamls, etc to examples directory /honee/.clang-format /honee/.clang-tidy /honee/.gitignore /honee/.gitlab-ci.yml /honee/.gitlab/issue_templates/bug_report.md /honee/.gitlab/issue_templates/feature_request.md /honee/.gitlab/merge_request_templates/default.md /honee/AUTHORS /honee/CHANGELOG.md /honee/CONTRIBUTING.md /honee/Doxyfile /honee/LICENSE /honee/Makefile /honee/README.md /honee/common.mk /honee/conf.py /honee/dd_sgs_data/OutScaling.dat /honee/dd_sgs_data/b1.dat /honee/dd_sgs_data/b2.dat /honee/dd_sgs_data/w1.dat /honee/dd_sgs_data/w2.dat /honee/doc/css/altair-plot.css /honee/doc/intro.md /honee/doc/references.bib /honee/doc/requirements.txt /honee/doc/runtime_options.md /honee/doc/theory.md STGInflow_blasius.dat STGRand.dat advection.yaml blasius.yaml channel.yaml conv_plot.py conv_test.sh gaussianwave.yaml meshes/Makefile meshes/cylinder.geo postprocess/vortexshedding.py stdoutParsing.py vortexshedding.yaml /honee/include/bc_definition.h /honee/include/log_events.h /honee/include/mat-ceed-impl.h /honee/include/mat-ceed.h /honee/include/petsc-ceed-utils.h /honee/include/petsc-ceed.h /honee/include/petsc_ops.h /honee/include/sgs_model_torch.h /honee/include/smartsim.h /honee/index.md /honee/navierstokes.c /honee/navierstokes.h /honee/problems/advection.c /honee/problems/bc_freestream.c /honee/problems/bc_slip.c /honee/problems/blasius.c /honee/problems/channel.c /honee/problems/densitycurrent.c /honee/problems/eulervortex.c /honee/problems/gaussianwave.c /honee/problems/newtonian.c /honee/problems/sgs_dd_model.c /honee/problems/sgs_model_torch_weak.c /honee/problems/shocktube.c /honee/problems/stg_shur14.c /honee/problems/stg_shur14.h /honee/problems/taylorgreen.c /honee/problems/torch/sgs_model_torch.cpp /honee/pytorch_pkgconfig.py /honee/qfunctions/advection.h /honee/qfunctions/advection_types.h /honee/qfunctions/bc_freestream.h /honee/qfunctions/bc_freestream_type.h /honee/qfunctions/bc_slip.h /honee/qfunctions/blasius.h /honee/qfunctions/channel.h /honee/qfunctions/densitycurrent.h /honee/qfunctions/differential_filter.h /honee/qfunctions/differential_filter_enums.h /honee/qfunctions/eulervortex.h /honee/qfunctions/gaussianwave.h /honee/qfunctions/grid_anisotropy_tensor.h /honee/qfunctions/inverse_multiplicity.h /honee/qfunctions/mass.h /honee/qfunctions/newtonian.h /honee/qfunctions/newtonian_state.h /honee/qfunctions/newtonian_types.h /honee/qfunctions/riemann_solver.h /honee/qfunctions/setupgeo.h /honee/qfunctions/setupgeo2d.h /honee/qfunctions/setupgeo_helpers.h /honee/qfunctions/sgs_dd_model.h /honee/qfunctions/sgs_dd_training.h /honee/qfunctions/sgs_dd_utils.h /honee/qfunctions/shocktube.h /honee/qfunctions/stabilization.h /honee/qfunctions/stabilization_types.h /honee/qfunctions/stg_shur14.h /honee/qfunctions/stg_shur14_type.h /honee/qfunctions/strong_boundary_conditions.h /honee/qfunctions/taylorgreen.h /honee/qfunctions/turb_spanstats.h /honee/qfunctions/turb_stats_types.h /honee/qfunctions/utils.h /honee/qfunctions/utils_eigensolver_jacobi.h /honee/qfunctions/velocity_gradient_projection.h /honee/src/bc_definition.c /honee/src/boundary_condition.c /honee/src/cloptions.c /honee/src/differential_filter.c /honee/src/dm_utils.c /honee/src/grid_anisotropy_tensor.c /honee/src/inverse_multiplicity.c /honee/src/log_events.c /honee/src/mat-ceed.c /honee/src/misc.c /honee/src/petsc_ops.c /honee/src/qdata.c /honee/src/setupdm.c /honee/src/setuplibceed.c /honee/src/setupts.c /honee/src/smartsim/sgs_dd_training.c /honee/src/smartsim/smartsim.c /honee/src/smartsim_weak.c /honee/src/strong_boundary_conditions.c /honee/src/turb_spanstats.c /honee/src/velocity_gradient_projection.c /honee/tests/blasius_stgtest.yaml /honee/tests/blasius_test.yaml /honee/tests/createPyTorchModel/NNModel_HIT.pt /honee/tests/createPyTorchModel/NNModel_HIT_fp64_jit.pt /honee/tests/createPyTorchModel/README.md /honee/tests/createPyTorchModel/update_weights.py /honee/tests/junit-xml/.gitignore /honee/tests/junit-xml/LICENSE.txt /honee/tests/junit-xml/README.rst /honee/tests/junit-xml/junit_xml/__init__.py /honee/tests/junit.py /honee/tests/junit_common.py /honee/tests/output/diff_filter_mms_y_spacing.dat /honee/tests/output/fluids-navierstokes-adv-rotation-cosine.bin /honee/tests/output/fluids-navierstokes-adv-rotation-implicit-stab-supg.bin /honee/tests/output/fluids-navierstokes-adv-skew.bin /honee/tests/output/fluids-navierstokes-adv-translation-implicit-stab-su.bin /honee/tests/output/fluids-navierstokes-adv2d-rotation-explicit-stab-supg-consistent-mass.bin /honee/tests/output/fluids-navierstokes-adv2d-rotation-explicit-strong.bin /honee/tests/output/fluids-navierstokes-adv2d-rotation-implicit-stab-supg.bin /honee/tests/output/fluids-navierstokes-blasius-bc_slip.bin /honee/tests/output/fluids-navierstokes-blasius-sgs-data-driven.bin /honee/tests/output/fluids-navierstokes-blasius.bin /honee/tests/output/fluids-navierstokes-blasius_STG.bin /honee/tests/output/fluids-navierstokes-blasius_STG_strongBC.bin /honee/tests/output/fluids-navierstokes-blasius_STG_weakT.bin /honee/tests/output/fluids-navierstokes-blasius_diff_filter_aniso_vandriest.bin /honee/tests/output/fluids-navierstokes-blasius_diff_filter_iso.bin /honee/tests/output/fluids-navierstokes-channel-prim.bin /honee/tests/output/fluids-navierstokes-channel.bin /honee/tests/output/fluids-navierstokes-dc-explicit.bin /honee/tests/output/fluids-navierstokes-dc-implicit-stab-none.bin /honee/tests/output/fluids-navierstokes-euler-explicit.bin /honee/tests/output/fluids-navierstokes-euler-implicit.bin /honee/tests/output/fluids-navierstokes-gaussianwave-IDL-entropy.bin /honee/tests/output/fluids-navierstokes-gaussianwave-IDL.bin /honee/tests/output/fluids-navierstokes-gaussianwave-explicit.bin /honee/tests/output/fluids-navierstokes-gaussianwave-shell.bin /honee/tests/output/fluids-navierstokes-shocktube-explicit-su-yzb.bin /honee/tests/output/fluids-navierstokes-taylor-green-IC.bin /honee/tests/output/fluids-navierstokes-turb-spanstats-IC.bin /honee/tests/output/fluids-navierstokes-turb-spanstats-stats.bin /honee/tests/output/y00_output.npy /honee/tests/output/y01_output.npy /honee/tests/smartsim_regression_framework.py /honee/tests/stats_test.yaml
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