refactor: Remove `dim` from ProblemData

Should just grab that from the DM

refactor: Clean up Surface Forces functions

fix: Skip Preallocation for auxillary DMs

refactor: Remove redundant comments from navierstokes.h

And newlines too

refactor: More consistent naming of qf context

minor(file): Remove char array lengths from arguments

There's no need for these to be here. I put them there before I have a
good understanding of pointers and C in general

stats: Remove unnecessary viewer setup code

- If `viewer_type` is not passed as a flag, then the viewer will keep
the original type it had

dm: Verify Face Sets label exists

internal: Add HONEEOptionsSetValueDefault

refactor: Remove SetupICsFromBinary

- Only used once, might as well just directly call HoneeLoadBinaryVec

internal: Add HoneeWriteBinaryVec

internal: Remove comm argument from HoneeLoadBinaryVec

refactor: honee-file functions

internal: Add honee-file

chore: Move to Apache-2.0 OR BSD-2-Clause

bc: Add and use DMLabelCreateGlobalValueArray

dm_utils: Use DMGetStratumIS for face labeling

Instead of looping through every face in the local grid (including
interior faces), this limits the looping to just the label points
associated with th

dm_utils: Use DMGetStratumIS for face labeling

Instead of looping through every face in the local grid (including
interior faces), this limits the looping to just the label points
associated with the boundary in "Face Sets"

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bc: Implement 3D dXdx for strong STG

- Used for determining element size in STG calculation

boundary: Add cell-to-face basis routines

Merge branch 'jrwrigh/fix_malloc_issues' into 'main'

Fix memory leaks

Closes #2

See merge request phypid/honee!18

fix: Clean up basis and restrictions for SGS and filtering

fix: Destroy array from PetscStrToArray

fix: turb_spanstats leak

matceed - docfix

fix: Destroy strong BC operator