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755bbe2504-Sep-2025 James Wright <james@jameswright.xyz>

test: Add advection CFL/Pe spanstats test


/honee/.gitlab-ci.yml
/honee/CHANGELOG.md
/honee/Makefile
/honee/doc/auxiliary.md
/honee/doc/examples.md
/honee/doc/runtime_options.md
/honee/examples/navierstokes.c
/honee/include/navierstokes.h
/honee/include/petsc-ceed-utils.h
/honee/include/smartsim-impl.h
/honee/problems/advection.c
/honee/problems/bc_freestream.c
/honee/problems/bc_outflow.c
/honee/problems/blasius.c
/honee/problems/channel.c
/honee/problems/densitycurrent.c
/honee/problems/eulervortex.c
/honee/problems/gaussianwave.c
/honee/problems/newtonian.c
/honee/problems/sgs_dd_model.c
/honee/problems/shocktube.c
/honee/problems/stg_shur14.c
/honee/problems/taylorgreen.c
/honee/qfunctions/advection.h
/honee/qfunctions/bc_freestream.h
/honee/qfunctions/bc_freestream_type.h
/honee/qfunctions/bc_outflow.h
/honee/qfunctions/bc_slip.h
/honee/qfunctions/blasius.h
/honee/qfunctions/channel.h
/honee/qfunctions/densitycurrent.h
/honee/qfunctions/differential_filter.h
/honee/qfunctions/gaussianwave.h
/honee/qfunctions/monitor_cfl.h
/honee/qfunctions/monitor_totalkineticenergy.h
/honee/qfunctions/newtonian.h
/honee/qfunctions/newtonian_state.h
/honee/qfunctions/newtonian_types.h
/honee/qfunctions/riemann_solver.h
/honee/qfunctions/sgs_dd_model.h
/honee/qfunctions/sgs_dd_training.h
/honee/qfunctions/spanstats/cflpe.h
/honee/qfunctions/spanstats/turbulence.h
/honee/qfunctions/stabilization.h
/honee/qfunctions/stabilization_types.h
/honee/qfunctions/stg_shur14.h
/honee/qfunctions/stg_shur14_type.h
/honee/qfunctions/taylorgreen.h
/honee/qfunctions/utils.h
/honee/qfunctions/velocity_gradient_projection.h
/honee/src/diff_flux_projection.c
/honee/src/differential_filter.c
/honee/src/honee.c
/honee/src/mat-ceed.c
/honee/src/setupdm.c
/honee/src/setuplibceed.c
/honee/src/smartsim/sgs_dd_training.c
/honee/src/smartsim/smartsim.c
/honee/src/smartsim/solution.c
/honee/src/spanstats/cflpe.c
/honee/src/spanstats/spanstats.c
/honee/src/spanstats/turbulence.c
/honee/src/strong_boundary_conditions.c
cflpe-spanstats-stats-adv-rotation.bin
/honee/tests/smartsim_regression_framework.py
c4020f1f19-Aug-2025 James Wright <james@jameswright.xyz>

test(smartsim): Add test for smartsim solution addition

0aab724906-Jul-2025 James Wright <james@jameswright.xyz>

test: Add test for -ts_monitor_spanstats_cflpe


/honee/CHANGELOG.md
/honee/Makefile
/honee/conf.py
/honee/doc/auxiliary.md
/honee/doc/examples.md
/honee/examples/navierstokes.c
/honee/include/bc_definition.h
/honee/include/differential_filter.h
/honee/include/honee.h
/honee/include/navierstokes.h
/honee/include/nodal_projection.h
/honee/include/petsc-ceed-utils.h
/honee/include/smartsim.h
/honee/include/spanstats.h
/honee/problems/advection.c
/honee/problems/bc_freestream.c
/honee/problems/bc_outflow.c
/honee/problems/bc_slip.c
/honee/problems/blasius.c
/honee/problems/channel.c
/honee/problems/densitycurrent.c
/honee/problems/eulervortex.c
/honee/problems/gaussianwave.c
/honee/problems/newtonian.c
/honee/problems/sgs_dd_model.c
/honee/problems/shocktube.c
/honee/problems/stg_shur14.c
/honee/problems/stg_shur14.h
/honee/problems/taylorgreen.c
/honee/qfunctions/advection_types.h
/honee/qfunctions/bc_freestream.h
/honee/qfunctions/bc_slip.h
/honee/qfunctions/blasius.h
/honee/qfunctions/differential_filter.h
/honee/qfunctions/mass.h
/honee/qfunctions/monitor_cfl.h
/honee/qfunctions/newtonian_types.h
/honee/qfunctions/numerics.h
/honee/qfunctions/setupgeo_helpers.h
/honee/qfunctions/spanstats/cflpe.h
/honee/qfunctions/spanstats/turbulence.h
/honee/qfunctions/stabilization_types.h
/honee/qfunctions/utils.h
/honee/src/bc_definition.c
/honee/src/boundary_condition.c
/honee/src/cloptions.c
/honee/src/diff_flux_projection.c
/honee/src/differential_filter.c
/honee/src/dm_utils.c
/honee/src/grid_anisotropy_tensor.c
/honee/src/honee-file.c
/honee/src/honee-mass.c
/honee/src/honee.c
/honee/src/mat-ceed.c
/honee/src/misc.c
/honee/src/monitor_cfl.c
/honee/src/monitor_totalkineticenergy.c
/honee/src/setupdm.c
/honee/src/setuplibceed.c
/honee/src/setupts.c
/honee/src/smartsim/sgs_dd_training.c
/honee/src/smartsim/smartsim.c
/honee/src/smartsim_weak.c
/honee/src/spanstats/cflpe.c
/honee/src/spanstats/spanstats.c
/honee/src/spanstats/turbulence.c
/honee/src/strong_boundary_conditions.c
cflpe-spanstats-stats.bin
/honee/tests/stats_test.yaml
a5677b8117-Jun-2025 Mohi <mohadese.khoshnevisan99@gmail.com>

(!109) Add HONEE Git and Version info commands

56fab57d31-Mar-2025 James Wright <james@jameswright.xyz>

test: Modify TG test for background velocity

b3b2482810-Dec-2024 James Wright <james@jameswright.xyz>

feat(newt): Add div(Fdiff) projection to RHS

ea615d4c07-Dec-2024 James Wright <james@jameswright.xyz>

style: Refactor fluids -> HONEE


/honee/examples/navierstokes.c
/honee/include/log_events.h
/honee/problems/advection.c
/honee/problems/densitycurrent.c
/honee/problems/newtonian.c
/honee/problems/sgs_dd_model.c
/honee/problems/shocktube.c
/honee/problems/torch/sgs_model_torch.cpp
/honee/qfunctions/advection.h
/honee/qfunctions/blasius.h
/honee/qfunctions/channel.h
/honee/qfunctions/densitycurrent.h
/honee/qfunctions/eulervortex.h
/honee/qfunctions/mass.h
/honee/qfunctions/newtonian.h
/honee/qfunctions/setupgeo.h
/honee/qfunctions/setupgeo2d.h
/honee/qfunctions/setupgeo_helpers.h
/honee/qfunctions/shocktube.h
/honee/src/cloptions.c
/honee/src/diff_flux_projection.c
/honee/src/differential_filter.c
/honee/src/honee-file.c
/honee/src/log_events.c
/honee/src/monitor_cfl.c
/honee/src/petsc_ops.c
/honee/src/setupdm.c
/honee/src/setuplibceed.c
/honee/src/setupts.c
/honee/src/smartsim/sgs_dd_training.c
/honee/src/smartsim/smartsim.c
/honee/src/velocity_gradient_projection.c
adv-rotation-cosine.bin
adv-rotation-implicit-stab-supg.bin
adv-skew.bin
adv-translation-implicit-stab-su.bin
adv2d-boundary-layer-ic.bin
adv2d-rotation-explicit-stab-supg-consistent-mass.bin
adv2d-rotation-explicit-strong.bin
adv2d-rotation-implicit-stab-supg.bin
adv2d-wave-sine.bin
adv2d-wave-square-direct_divdiff.bin
adv2d-wave-square-indirect_divdiff.bin
blasius-bc_slip.bin
blasius-bc_slip_indirect.bin
blasius-sgs-data-driven.bin
blasius.bin
blasius_STG.bin
blasius_STG_strongBC.bin
blasius_STG_weakT.bin
blasius_diff_filter_aniso_vandriest.bin
blasius_diff_filter_iso.bin
channel-prim.bin
channel.bin
dc-explicit.bin
dc-implicit-stab-none.bin
euler-explicit.bin
euler-implicit.bin
flatplate-STG.bin
gaussianwave-IDL-entropy.bin
gaussianwave-IDL.bin
gaussianwave-cgns-load.bin
gaussianwave-explicit.bin
gaussianwave-shell.bin
shocktube-explicit-su-yzb.bin
taylor-green-IC.bin
taylor-green.bin
turb-spanstats-IC.bin
turb-spanstats-stats.bin
/honee/tests/stats_test.yaml
87fd7f3307-Dec-2024 James Wright <james@jameswright.xyz>

feat: Add -ts_monitor_cfl

c4a0f6c719-Nov-2024 James Wright <james@jameswright.xyz>

test: Add CGNS load IC test

035c792401-Dec-2024 James Wright <james@jameswright.xyz>

test: Add test for total_ke csv monitor


/honee/CHANGELOG.md
/honee/doc/runtime_options.md
/honee/examples/advection.yaml
/honee/examples/advection_wave.yaml
/honee/examples/navierstokes.c
/honee/examples/taylor_green_vortex.yaml
/honee/include/honee-file.h
/honee/include/mat-ceed-impl.h
/honee/include/mat-ceed.h
/honee/include/navierstokes.h
/honee/include/petsc-ceed-utils.h
/honee/problems/advection.c
/honee/problems/sgs_dd_model.c
/honee/qfunctions/advection.h
/honee/qfunctions/advection_types.h
/honee/qfunctions/blasius.h
/honee/qfunctions/channel.h
/honee/qfunctions/densitycurrent.h
/honee/qfunctions/diff_flux_projection.h
/honee/qfunctions/differential_filter.h
/honee/qfunctions/eulervortex.h
/honee/qfunctions/gaussianwave.h
/honee/qfunctions/grid_anisotropy_tensor.h
/honee/qfunctions/inverse_multiplicity.h
/honee/qfunctions/mass.h
/honee/qfunctions/monitor_totalkineticenergy.h
/honee/qfunctions/newtonian.h
/honee/qfunctions/newtonian_state.h
/honee/qfunctions/newtonian_types.h
/honee/qfunctions/setupgeo.h
/honee/qfunctions/setupgeo2d.h
/honee/qfunctions/setupgeo_helpers.h
/honee/qfunctions/sgs_dd_model.h
/honee/qfunctions/sgs_dd_training.h
/honee/qfunctions/sgs_dd_utils.h
/honee/qfunctions/shocktube.h
/honee/qfunctions/stabilization.h
/honee/qfunctions/stg_shur14.h
/honee/qfunctions/stg_shur14_type.h
/honee/qfunctions/strong_boundary_conditions.h
/honee/qfunctions/taylorgreen.h
/honee/qfunctions/turb_spanstats.h
/honee/qfunctions/utils.h
/honee/qfunctions/utils_eigensolver_jacobi.h
/honee/qfunctions/velocity_gradient_projection.h
/honee/src/cloptions.c
/honee/src/diff_flux_projection.c
/honee/src/grid_anisotropy_tensor.c
/honee/src/honee-file.c
/honee/src/honee-mass.c
/honee/src/mat-ceed.c
/honee/src/misc.c
/honee/src/monitor_totalkineticenergy.c
/honee/src/petsc_ops.c
/honee/src/setuplibceed.c
/honee/src/setupts.c
/honee/src/smartsim/sgs_dd_training.c
/honee/src/turb_spanstats.c
/honee/src/velocity_gradient_projection.c
/honee/tests/junit.py
/honee/tests/junit_common.py
fluids-navierstokes-taylor-green.bin
taylorgreen_totalke.csv
/honee/tests/stats_test.yaml
b4fd18df14-Oct-2024 James Wright <james@jameswright.xyz>

feat(advdif): Add bl_height_factor option

df29e1ee04-Oct-2024 James Wright <james@jameswright.xyz>

fix(tests): Update tests for fixed ts_type alpha

The startup logic for `ts_type: alpha` was fixed in petsc/petsc!7816, so
the reference solutions needed to be fixed as well.

5239d4bb23-Sep-2024 James Wright <james@jameswright.xyz>

Merge MR !51, 'jrwrigh/fix_advdiff_tau', into 'main'

fix(advdif): Correct gij size, square Ctau_{a,d}

See merge request phypid/honee!51

3da913d119-Sep-2024 James Wright <james@jameswright.xyz>

feat: Add flatplate STG yaml and setup files

Needed for reframe testing on Aurora, offers "real" test of turbulent
flat plate simulations

63cbeca818-Sep-2024 James Wright <james@jameswright.xyz>

feat(advdif): Add BL yaml file, use in test

4ca5135b07-Sep-2024 James Wright <james@jameswright.xyz>

fix(advdif): Correct gij size, square Ctau_{a,d}

- Correct gij size based on reference element size
- Ctau_{a,d} should be squared to align with 1D minreg definitions

3d1afcc119-Aug-2024 James Wright <james@jameswright.xyz>

feat(advdif): Add Boundary Layer IC, wind type

141134f817-Aug-2024 James Wright <james@jameswright.xyz>

test(advdif): Add tests for div(F_diff) projection

fbabb36513-Aug-2024 James Wright <james@jameswright.xyz>

feat(advdif): Add diffusion tau coefficient

dac5a35229-Jul-2024 James Wright <james@jameswright.xyz>

tests(advdif): Add square IC test

22312f1f27-Jul-2024 James Wright <james@jameswright.xyz>

test(advdif): Add test for sine wave IC

8c85b83524-Jul-2024 James Wright <james@jameswright.xyz>

feat: Implement divergence of diffusive flux


/honee/.gitignore
/honee/.gitlab-ci.yml
/honee/AUTHORS
/honee/CHANGELOG.md
/honee/CONTRIBUTING.md
/honee/LICENSE-APACHE
/honee/LICENSE-BSD
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/honee/examples/STGInflow_blasius.dat
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/honee/examples/conv_plot.py
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/honee/examples/dd_sgs_data/OutScaling.dat
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/honee/examples/dd_sgs_data/w1.dat
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/honee/examples/gaussianwave.yaml
/honee/examples/meshes/Makefile
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/honee/include/smartsim.h
/honee/index.md
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/honee/problems/newtonian.c
/honee/problems/sgs_dd_model.c
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/honee/problems/shocktube.c
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/honee/problems/torch/sgs_model_torch.cpp
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/honee/qfunctions/channel.h
/honee/qfunctions/densitycurrent.h
/honee/qfunctions/diff_flux_projection.h
/honee/qfunctions/differential_filter.h
/honee/qfunctions/differential_filter_enums.h
/honee/qfunctions/eulervortex.h
/honee/qfunctions/gaussianwave.h
/honee/qfunctions/grid_anisotropy_tensor.h
/honee/qfunctions/inverse_multiplicity.h
/honee/qfunctions/mass.h
/honee/qfunctions/newtonian.h
/honee/qfunctions/newtonian_state.h
/honee/qfunctions/newtonian_types.h
/honee/qfunctions/riemann_solver.h
/honee/qfunctions/setupgeo.h
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/honee/qfunctions/sgs_dd_model.h
/honee/qfunctions/sgs_dd_training.h
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/honee/qfunctions/shocktube.h
/honee/qfunctions/stabilization.h
/honee/qfunctions/stabilization_types.h
/honee/qfunctions/stg_shur14.h
/honee/qfunctions/stg_shur14_type.h
/honee/qfunctions/strong_boundary_conditions.h
/honee/qfunctions/taylorgreen.h
/honee/qfunctions/turb_spanstats.h
/honee/qfunctions/turb_stats_types.h
/honee/qfunctions/utils.h
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/honee/src/cloptions.c
/honee/src/diff_flux_projection.c
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/honee/src/dm_utils.c
/honee/src/grid_anisotropy_tensor.c
/honee/src/honee-file.c
/honee/src/inverse_multiplicity.c
/honee/src/log_events.c
/honee/src/mat-ceed.c
/honee/src/misc.c
/honee/src/petsc_ops.c
/honee/src/qdata.c
/honee/src/setupdm.c
/honee/src/setuplibceed.c
/honee/src/setupts.c
/honee/src/smartsim/sgs_dd_training.c
/honee/src/smartsim/smartsim.c
/honee/src/smartsim_weak.c
/honee/src/strong_boundary_conditions.c
/honee/src/turb_spanstats.c
/honee/src/velocity_gradient_projection.c
/honee/tests/blasius_stgtest.yaml
/honee/tests/junit.py
fluids-navierstokes-blasius-bc_slip.bin
fluids-navierstokes-blasius-bc_slip_indirect.bin
/honee/tests/smartsim_regression_framework.py
/honee/tests/stats_test.yaml
67f3e65926-Jun-2024 James Wright <james@jameswright.xyz>

ci: Enable smartsim and PyTorch testing

a32db64d26-Jun-2024 James Wright <james@jameswright.xyz>

chore: Move createPyTorchModel

0006be3324-Jun-2024 James Wright <james@jameswright.xyz>

chore: Get tests back up and running


/honee/.clang-format
/honee/.clang-tidy
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/honee/STGInflow_blasius.dat
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