Fix the inconsistent usage of #if [!]defined XXX compared to defined(XXX)Thanks-to: Pierre JolivetAn LLM Claude detected the incosnsitency it was not used to remove the inconsistency
Add automatic generated fortran support for setting and returning contextsMajor cleanup of the code for setting and returning application (previously called user) contexts - PetscCtx ctx is now t
Add automatic generated fortran support for setting and returning contextsMajor cleanup of the code for setting and returning application (previously called user) contexts - PetscCtx ctx is now the standard for passing in contexts - PetscCtxRt ctx is the standard for passing out contexts, including context destroy routines based on PetscCtxDestroyFnBoth of these are typedef to void*Also removed most use of user and userctx for context arguments now consistently named ctxImproved documentation on PetscCtx and PetscCtxRt and on how to use contexts (including getting them) from Fortran
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checkbadSource: enforce proper style in makefiles
Change use of void (*)(void) and void (**)(void) in the PETSc API to PetscVoidFn * and PetscVoidFn ** or PetscErrorCodeFn * or PetscErrorCodeFn **
Remove unnecessary braces around one-linersgit grep -lE "[ ]*(if|for|while) \(.*\) {[^;]*;[^;]*}$" -- '*.c' '*.cxx' '*.cu' '*.h' '*.hpp' '*.cpp' | xargs sed -i '' -E 's#([ ]*)(if|for|while) \((.*)\
Remove unnecessary braces around one-linersgit grep -lE "[ ]*(if|for|while) \(.*\) {[^;]*;[^;]*}$" -- '*.c' '*.cxx' '*.cu' '*.h' '*.hpp' '*.cpp' | xargs sed -i '' -E 's#([ ]*)(if|for|while) \((.*)\) {([^;]*);([^;]*)}$#\1\2 \(\3\)\4;\5#'
Minor cleanup
One-liners from petsc/petsc!5344 and petsc/petsc!5557Slightly reworked regular expressiongit ls-files -z -- '*.c' '*.cxx' '*.cu' '*.h' '*.hpp' '*.cpp' | while IFS= read -r -d '' file; do cat
One-liners from petsc/petsc!5344 and petsc/petsc!5557Slightly reworked regular expressiongit ls-files -z -- '*.c' '*.cxx' '*.cu' '*.h' '*.hpp' '*.cpp' | while IFS= read -r -d '' file; do cat $file | tr '\n' '\r' | sed -E 's/\r([ ]*)(for|if|while|else) ([^\r]*)\{\r[ ]*Petsc([a-zA-Z]*)\(([^\r]*)\);\r[ ]*\}\r/\r\1\2 \3Petsc\4(\5);\r/g' | tr '\r' '\n' > ${file}.joe; mv ${file}.joe ${file}done
missing "s" for isascii and issundials
dm: add createcellcoordinatedm method
Fix wrong case for PETSc
Fortran 90: fully embrace After 34 years!- deprecate use of 'F90' in Fortran function names- use Fortran pointers when appropriate- the new Fortran API is not backward compatible with previous ve
Fortran 90: fully embrace After 34 years!- deprecate use of 'F90' in Fortran function names- use Fortran pointers when appropriate- the new Fortran API is not backward compatible with previous versions!- also clean up inconsistent PETSc code detected by new Fortran generation tools- drop use of bfort- automatically generate all the Fortran PETSc objects, enums etc from the include files- generate most of the Fortran interface definitions and functions from the source code- simplify the number and organization of Fortran modulesCo-authored-by: Jose E. Roman <jroman@dsic.upv.es>
Remove large but unused files
Unifies all context destructors to have a form of PetscCtxDestroyFn == PetscErrorCode (*)(void **)Changes the previous subset of destructor APIs that used PetscErrorCode (*)(void *) (mostly those t
Unifies all context destructors to have a form of PetscCtxDestroyFn == PetscErrorCode (*)(void **)Changes the previous subset of destructor APIs that used PetscErrorCode (*)(void *) (mostly those thatused PetscContainer- Now allows any context to be a PetscObject- Will provide a cleaner mapping to bindings in other languages- Simplifies the maintenance of PETSc source code; improves clarityNot backward compatible, compiler warnings will tell users what functions need to be updated
Use PetscObjectContainerCompose() when applicable
Remove unneeded parentheses
Fix MPIU_* routines to always return MPI error codes and thus be usable with PetscCallMPI()Introduce MPIU_Count to be used when MPI_Count is not available
upgrade moab to version 5.5.0
Update source code removing all unneeded /*@C and associated manual stubs and interfaces
Docs: fix missing back ticks.
CI: update to clang-format-18
Remove multiple parentheses and extra semicolongit grep -l -E "\(\([a-zA-Z0-9_]+\)\(\*[a-zA-Z0-9_]+\)[, )]" | xargs sed -r -i'' 's#\(\(([a-zA-Z0-9_]+)\)\(\*([a-zA-Z0-9_]+)\)([, )])#\(\(\1\)\*\2\3#g
Remove multiple parentheses and extra semicolongit grep -l -E "\(\([a-zA-Z0-9_]+\)\(\*[a-zA-Z0-9_]+\)[, )]" | xargs sed -r -i'' 's#\(\(([a-zA-Z0-9_]+)\)\(\*([a-zA-Z0-9_]+)\)([, )])#\(\(\1\)\*\2\3#g'git grep -l -E "Petsc(.)*\(\(\*[a-zA-Z0-9_]*\)," | xargs sed -r -i'' 's#Petsc([a-zA-Z0-9_]*)\(\(\*([a-zA-Z0-9_]*)\), #Petsc\1(*\2, #g'git grep -l -E "([\!\&\~\*\(]|\)\)|\([^,\*\(]+\**\))\(([a-zA-Z0-9_]+((\.|->)[a-zA-Z0-9_]+|\[[a-zA-Z0-9_ \%\+\*\-]+\])+)\)" | xargs sed -r -i'' 's#([\!\&\~\*\(]|\)\)|\([^,\*\(]+\**\))\(([a-zA-Z0-9_]+((\.|->)[a-zA-Z0-9_]+|\[[a-zA-Z0-9_ \%\+\*\-]+\])+)\)#\1\2#g'
checkbadSource: rules for PetscFunctionBegin and derivatives
Plex: Flexible creation of section permutations- Add createsectionpermutation to DM ops- Change DMPlexReorderDefaultFlag to DMReorderDefaultFlag- Move DMReorderDefaultFlag to the correct headerA
Plex: Flexible creation of section permutations- Add createsectionpermutation to DM ops- Change DMPlexReorderDefaultFlag to DMReorderDefaultFlag- Move DMReorderDefaultFlag to the correct headerApply 1 suggestion(s) to 1 file(s)
Merge branch 'barry/2023-12-22/rm-libbase' into 'main'LIBBASE is no longer used in make so remove itSee merge request petsc/petsc!7139
LIBBASE is no longer used in make so remove it
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