nasm - OpenGrok history log for /petsc/src/snes/impls/nasm

Revision	Date	Author	Comments (<<< Hide modified files) (Show modified files >>>)
96a0c994	14-Jan-2016	Barry Smith <bsmith@mcs.anl.gov>	fixed up formatting of references in manualpages to consistent style References: + 1. - ref1 . 2. - ref2 - 3. - ref3 previously the formatting was varied and ugly /petsc/share/petsc/saws/linearsolveroptions.html /petsc/src/dm/dt/interface/dt.c /petsc/src/dm/impls/network/networkmonitor.c /petsc/src/ksp/ksp/impls/bcgs/bcgs.c /petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/ksp/impls/cgs/cgs.c /petsc/src/ksp/ksp/impls/cr/cr.c /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/ksp/impls/gcr/gcr.c /petsc/src/ksp/ksp/impls/gmres/dgmres/dgmres.c /petsc/src/ksp/ksp/impls/gmres/gmres.c /petsc/src/ksp/ksp/impls/gmres/lgmres/lgmres.c /petsc/src/ksp/ksp/impls/lcd/lcd.c /petsc/src/ksp/ksp/impls/lsqr/lsqr.c /petsc/src/ksp/ksp/impls/qcg/qcg.c /petsc/src/ksp/ksp/impls/rich/rich.c /petsc/src/ksp/ksp/impls/tcqmr/tcqmr.c /petsc/src/ksp/ksp/impls/tfqmr/tfqmr.c /petsc/src/ksp/ksp/interface/iguess.c /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/factor/icc/icc.c /petsc/src/ksp/pc/impls/factor/ilu/ilu.c /petsc/src/ksp/pc/impls/fieldsplit/fieldsplit.c /petsc/src/ksp/pc/impls/gasm/gasm.c /petsc/src/ksp/pc/impls/kaczmarz/kaczmarz.c /petsc/src/ksp/pc/impls/lsc/lsc.c /petsc/src/ksp/pc/impls/wb/wb.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/impls/aij/mpi/mkl_cpardiso/mkl_cpardiso.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mumps/mumps.c /petsc/src/mat/impls/aij/seq/mkl_pardiso/mkl_pardiso.c /petsc/src/mat/impls/aij/seq/superlu/superlu.c /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/preallocator/makefile /petsc/src/snes/impls/composite/snescomposite.c /petsc/src/snes/impls/fas/fas.c /petsc/src/snes/impls/gs/snesgs.c /petsc/src/snes/impls/ms/ms.c aspin.c nasm.c /petsc/src/snes/impls/ncg/snesncg.c /petsc/src/snes/impls/ngmres/anderson.c /petsc/src/snes/impls/ngmres/snesngmres.c /petsc/src/snes/impls/qn/qn.c /petsc/src/snes/impls/vi/rs/virs.c /petsc/src/snes/impls/vi/ss/viss.c /petsc/src/sys/objects/options.c /petsc/src/sys/objects/prefix.c /petsc/src/sys/utils/mpits.c /petsc/src/tao/complementarity/impls/asls/asfls.c /petsc/src/tao/complementarity/impls/asls/asils.c /petsc/src/ts/impls/arkimex/arkimex.c /petsc/src/ts/impls/explicit/ssp/ssp.c /petsc/src/ts/impls/implicit/alpha/alpha.c /petsc/src/ts/impls/implicit/gl/gl.c /petsc/src/ts/impls/pseudo/posindep.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/ts.c /petsc/tutorials/HandsOnExercise.html /petsc/tutorials/TAOHandsOnExercise.html
4f02bc6a	14-Jan-2016	Barry Smith <bsmith@mcs.anl.gov>	broken nonlinear solver table links fixed Reported-by: Andrew McRae <A.T.T.McRae@bath.ac.uk> Also made References: formatting consistent by always listing authors first /petsc/bin/maint/builddist /petsc/bin/maint/confignightly/default /petsc/bin/maint/mapnameslatex.py /petsc/bin/maint/runhtml.py /petsc/bin/sendToJenkins /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/packages/hypre.py 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d018cf17	26-Oct-2015	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'barry/add-mpiu_allreduce' /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/cusp.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/packages/ml.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/pragmatic.py /petsc/config/BuildSystem/config/packages/saws.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/config/BuildSystem/config/packages/tchem.py /petsc/config/BuildSystem/nargs.py /petsc/config/BuildSystem/retrieval.py /petsc/include/petsc/private/petscimpl.h /petsc/include/petsc/private/snesimpl.h /petsc/include/petscdraw.h /petsc/include/petscsys.h /petsc/src/dm/impls/da/dacorn.c /petsc/src/dm/impls/da/dagtona.c /petsc/src/dm/impls/da/dalocal.c /petsc/src/dm/impls/da/dasub.c /petsc/src/dm/impls/da/fdda.c /petsc/src/dm/impls/da/gr2.c /petsc/src/dm/impls/moab/dmmbvec.cxx /petsc/src/dm/impls/moab/dmmoab.cxx /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexfem.c /petsc/src/dm/impls/plex/plexgenerate.c /petsc/src/dm/impls/plex/plexgeometry.c /petsc/src/dm/impls/plex/plexhdf5.c /petsc/src/dm/impls/plex/plexpreallocate.c /petsc/src/dm/impls/plex/plextree.c /petsc/src/dm/impls/plex/plexvtk.c /petsc/src/dm/interface/dm.c /petsc/src/dm/interface/dmi.c /petsc/src/ksp/ksp/impls/bcgs/fbcgsr/fbcgsr.c /petsc/src/ksp/ksp/impls/cg/cg.c /petsc/src/ksp/ksp/impls/gmres/agmres/agmresorthog.c /petsc/src/ksp/ksp/impls/ibcgs/ibcgs.c /petsc/src/ksp/ksp/interface/iterativ.c /petsc/src/ksp/pc/impls/asm/asm.c /petsc/src/ksp/pc/impls/bddc/bddcgraph.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/bjacobi/bjacobi.c /petsc/src/ksp/pc/impls/gamg/agg.c /petsc/src/ksp/pc/impls/gamg/geo.c /petsc/src/ksp/pc/impls/gasm/gasm.c /petsc/src/ksp/pc/impls/redistribute/redistribute.c /petsc/src/mat/coarsen/impls/hem/hem.c /petsc/src/mat/coarsen/impls/mis/mis.c /petsc/src/mat/color/impls/greedy/greedy.c /petsc/src/mat/color/impls/jp/jp.c /petsc/src/mat/examples/tests/ex300.c /petsc/src/mat/examples/tests/makefile /petsc/src/mat/examples/tests/output/ex300_1.out /petsc/src/mat/impls/adj/mpi/mpiadj.c /petsc/src/mat/impls/aij/mpi/mpiaij.c /petsc/src/mat/impls/aij/mpi/mpiov.c /petsc/src/mat/impls/baij/mpi/baijov.c /petsc/src/mat/impls/baij/mpi/mpibaij.c /petsc/src/mat/impls/dense/mpi/mmdense.c /petsc/src/mat/impls/dense/mpi/mpidense.c /petsc/src/mat/impls/elemental/matelem.cxx /petsc/src/mat/impls/is/matis.c /petsc/src/mat/impls/lrc/lrc.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/nest/matnest.c /petsc/src/mat/impls/normal/normm.c /petsc/src/mat/impls/normal/normmh.c /petsc/src/mat/impls/sbaij/mpi/mpisbaij.c /petsc/src/mat/impls/sbaij/mpi/sbaijov.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/utils/axpy.c /petsc/src/mat/utils/bandwidth.c /petsc/src/mat/utils/matstash.c /petsc/src/snes/impls/gs/gssecant.c nasm.c /petsc/src/snes/impls/vi/vi.c /petsc/src/snes/interface/snesut.c /petsc/src/snes/utils/dmplexsnes.c /petsc/src/sys/fileio/fretrieve.c /petsc/src/sys/logging/plog.c /petsc/src/sys/logging/xmllogevent.c /petsc/src/sys/objects/pinit.c /petsc/src/sys/objects/tagm.c /petsc/src/sys/utils/mpimesg.c /petsc/src/sys/utils/mpits.c /petsc/src/sys/utils/pbarrier.c /petsc/src/sys/utils/pdisplay.c /petsc/src/sys/utils/psplit.c /petsc/src/sys/utils/sseenabled.c /petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c /petsc/src/ts/event/tsevent.c /petsc/src/ts/examples/tutorials/network/wash/pipes1.c /petsc/src/ts/impls/implicit/gl/gl.c /petsc/src/ts/interface/ts.c /petsc/src/vec/is/is/impls/stride/stride.c /petsc/src/vec/is/is/utils/iscoloring.c /petsc/src/vec/is/is/utils/iscomp.c /petsc/src/vec/is/is/utils/isdiff.c /petsc/src/vec/is/sf/impls/window/sfwindow.c /petsc/src/vec/is/utils/isltog.c /petsc/src/vec/vec/impls/mpi/mpicusp/mpicusp.cu /petsc/src/vec/vec/impls/mpi/mpiviennacl/mpiviennacl.cxx /petsc/src/vec/vec/impls/mpi/pbvec.c /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/impls/mpi/pvec2.c /petsc/src/vec/vec/impls/seq/dvec2.c /petsc/src/vec/vec/interface/rvector.c /petsc/src/vec/vec/utils/comb.c /petsc/src/vec/vec/utils/projection.c /petsc/src/vec/vec/utils/vinv.c /petsc/src/vec/vec/utils/vpscat.c /petsc/src/vec/vec/utils/vscat.c
1992313a	26-Oct-2015	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'stefano_zampini/fix-aspin-create' /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/cg3 /petsc/bin/maint/confignightly/el6 /petsc/bin/maint/confignightly/el6-2 /petsc/bin/maint/confignightly/el6-3 /petsc/bin/maint/confignightly/frog2 /petsc/bin/petscdiff /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/ml.py /petsc/config/BuildSystem/script.py /petsc/config/PETSc/options/dataFilesPath.py /petsc/config/configure.py /petsc/config/examples/arch-cuda-single.py /petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py /petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py /petsc/config/examples/arch-freebsd-pkgs-opt.py /petsc/config/examples/arch-linux-gcc-absoft.py /petsc/config/examples/arch-linux-pkgs-opt.py /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petscblaslapack.h /petsc/lib/petsc/conf/rules 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b2566f29	22-Oct-2015	Barry Smith <bsmith@mcs.anl.gov>	Introduce MPIU_Allreduce() to detect cases where all processes that share an MPI comm do not call the same sequence of MPI_Allreduce() This is a bug that can be difficult to track down. Suggested-by Introduce MPIU_Allreduce() to detect cases where all processes that share an MPI comm do not call the same sequence of MPI_Allreduce() This is a bug that can be difficult to track down. Suggested-by: Eric Chamberland <Eric.Chamberland@giref.ulaval.ca> Suggested-by: Patrick Lacasse <placasse@giref.ulaval.ca> show more ... /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/cg3 /petsc/bin/maint/confignightly/frog2 /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/ml.py /petsc/config/examples/arch-cuda-single.py /petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py /petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py /petsc/config/examples/arch-freebsd-pkgs-opt.py /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/petscimpl.h /petsc/include/petsc/private/snesimpl.h /petsc/include/petscdraw.h /petsc/include/petscsys.h /petsc/lib/petsc/conf/test /petsc/src/contrib/nightlysummary/runhtml.py /petsc/src/dm/impls/da/dacorn.c /petsc/src/dm/impls/da/dagtona.c /petsc/src/dm/impls/da/dalocal.c /petsc/src/dm/impls/da/dasub.c /petsc/src/dm/impls/da/fdda.c /petsc/src/dm/impls/da/gr2.c 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263b3d60	06-Oct-2015	Stefano Zampini <stefano.zampini@gmail.com>	SNESASPIN: forgot to reset NEWTONLS and free the data aspin.c
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1575c14d	11-Aug-2015	Barry Smith <bsmith@mcs.anl.gov>	Replaced PetscViewerASCIISynchronizedAllow() with PetscViewerASCIIPushSynchronized() PetscViewerASCIIPopSynchronized() /petsc/bin/maint/checkBuilds.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/concurrencykit.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/openmp.py /petsc/config/builder.py /petsc/config/examples/arch-linux-cxx-cmplx-pkgs-64idx.py /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/petscimpl.h /petsc/include/petsc/private/viewerimpl.h /petsc/include/petscbt.h /petsc/include/petscerror.h /petsc/include/petscviewer.h /petsc/lib/petsc/conf/rules /petsc/makefile /petsc/src/contrib/nightlysummary/runhtml.py /petsc/src/dm/dt/makefile /petsc/src/dm/examples/tests/ex16.c /petsc/src/dm/examples/tests/ex2.c /petsc/src/dm/examples/tests/ex4.c 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3f08860e	28-Jul-2015	Barry Smith <bsmith@mcs.anl.gov>	merged PetscViewerGetSingleton() and PetscViewerGetSubcomm() into PetscViewerGetSubViewer() Does not currently work, needs fixes to work correctly recursively /petsc/.mailmap /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/dos/buildntdist /petsc/bin/maint/jenkins/jenkins_configure.sh /petsc/bin/maint/jenkins/jenkins_make.sh /petsc/bin/maint/jenkins/jenkins_test.sh /petsc/bin/maint/rebuildtar /petsc/bin/maint/update-docs.py /petsc/bin/maint/xclude /petsc/bin/petsc_gen_xdmf.py /petsc/bin/petscmpiexec /petsc/bin/sendToJenkins /petsc/config/BuildSystem/RDict.py /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py 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422a814e	01-May-2015	Barry Smith <bsmith@mcs.anl.gov>	Infrastructure that allows failures in PCSetUp(), PCApply(), MatMult() etc due to, for example a zero pivot or function evaluation outside its domain, to propagate up and become a KSP_DIVERGED inste Infrastructure that allows failures in PCSetUp(), PCApply(), MatMult() etc due to, for example a zero pivot or function evaluation outside its domain, to propagate up and become a KSP_DIVERGED instead of generating an error that stops the program. In response to Issue 96. This includes failures in MatCreateSNESMF() applications due to domain errors. The mechanism to propagate some errors is by setting Info or Nan into the output vector and using the norm or inner product reductions in SNES or KSP to propagate the error condition to all processes and then handling them immediately after the norm or inner product. This allows, for example, ODE integrators to try again with a smaller time-step if the PCSetUp failed instead of requiring a complete restart of the run with other options. Currently some error conditions, such as function domain error in a line search may not get progated up using the correct SNESConvergedReason See src/snes/examples/tests/ex69.c for the handling of several conditions show more ... /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/PETSc/options/arch.py /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/private/kspimpl.h /petsc/include/petsc/private/linesearchimpl.h /petsc/include/petsc/private/matimpl.h /petsc/include/petsc/private/pcimpl.h /petsc/include/petsc/private/snesimpl.h /petsc/include/petsc/private/taoimpl.h /petsc/include/petsc/private/tsimpl.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscpc.h /petsc/include/petscsnes.h /petsc/include/petsctao.h /petsc/include/petscts.h /petsc/include/petscvec.h /petsc/include/petscviewerhdf5.h /petsc/src/dm/examples/tutorials/ex9.c 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/petsc/src/ts/examples/tutorials/power_grid/ex3adj_events.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt.c /petsc/src/ts/examples/tutorials/power_grid/ex3opt_fd.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busadj.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt_fd.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/interface/ts.c /petsc/src/vec/vec/examples/tests/ex47.c /petsc/src/vec/vec/examples/tests/makefile /petsc/src/vec/vec/impls/mpi/pdvec.c /petsc/src/vec/vec/interface/vector.c /petsc/src/vec/vec/utils/vecio.c
c579b300	24-Apr-2015	Patrick Farrell <patrick.farrell@maths.ox.ac.uk>	If the user sets bounds and calls a solver that does not support them, throw an error. /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/petscmpiexec /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/builder2.py /petsc/include/petsc/private/dmpleximpl.h /petsc/include/petsc/private/petscimpl.h /petsc/include/petscerror.h /petsc/include/petscis.h /petsc/include/petscoptions.h /petsc/include/petscsys.h /petsc/src/benchmarks/streams/MPIVersion.c /petsc/src/dm/dt/interface/dt.c /petsc/src/dm/dt/interface/dtds.c /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtfv.c /petsc/src/dm/examples/tutorials/makefile /petsc/src/dm/impls/plex/plexgeometry.c /petsc/src/dm/impls/plex/plexpartition.c /petsc/src/dm/interface/dm.c /petsc/src/docs/tex/petsc.bib /petsc/src/ksp/ksp/examples/tutorials/ex2.c /petsc/src/ksp/ksp/examples/tutorials/makefile /petsc/src/ksp/ksp/impls/lsqr/lsqr.c /petsc/src/ksp/ksp/interface/dmksp.c /petsc/src/ksp/ksp/interface/itcreate.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/coarsen/coarsen.c /petsc/src/mat/color/interface/matcoloring.c /petsc/src/mat/examples/tests/ex117.c /petsc/src/mat/examples/tests/ex45.c /petsc/src/mat/impls/baij/mpi/baijov.c /petsc/src/mat/impls/mffd/mffd.c /petsc/src/mat/impls/nest/matnest.c /petsc/src/mat/interface/matnull.c /petsc/src/mat/interface/matrix.c /petsc/src/mat/matfd/fdmatrix.c /petsc/src/mat/partition/partition.c /petsc/src/mat/utils/gcreate.c /petsc/src/snes/examples/tutorials/ex48.c /petsc/src/snes/examples/tutorials/ex73f90t.F90 /petsc/src/snes/examples/tutorials/makefile /petsc/src/snes/examples/tutorials/output/ex9_7.out /petsc/src/snes/examples/tutorials/output/ex9_8.out /petsc/src/snes/examples/tutorials/output/ex9_9.out /petsc/src/snes/impls/composite/snescomposite.c /petsc/src/snes/impls/fas/fas.c /petsc/src/snes/impls/gs/snesgs.c /petsc/src/snes/impls/ksponly/ksponly.c /petsc/src/snes/impls/ls/ls.c /petsc/src/snes/impls/ms/ms.c /petsc/src/snes/impls/multiblock/multiblock.c nasm.c /petsc/src/snes/impls/ncg/snesncg.c /petsc/src/snes/impls/ngmres/anderson.c /petsc/src/snes/impls/ngmres/snesngmres.c /petsc/src/snes/impls/qn/qn.c /petsc/src/snes/impls/richardson/snesrichardson.c /petsc/src/snes/impls/tr/tr.c /petsc/src/snes/impls/vi/vi.c /petsc/src/snes/interface/snes.c /petsc/src/snes/linesearch/interface/linesearch.c /petsc/src/snes/utils/dmsnes.c /petsc/src/sys/classes/draw/impls/win32/win32draw.c /petsc/src/sys/classes/draw/interface/drawreg.c /petsc/src/sys/classes/draw/utils/axisc.c /petsc/src/sys/classes/draw/utils/bars.c /petsc/src/sys/classes/draw/utils/dscatter.c /petsc/src/sys/classes/draw/utils/hists.c /petsc/src/sys/classes/draw/utils/lgc.c /petsc/src/sys/classes/matlabengine/matlab.c /petsc/src/sys/classes/random/interface/randomc.c /petsc/src/sys/classes/viewer/interface/viewreg.c /petsc/src/sys/error/fp.c /petsc/src/sys/fileio/sysio.c /petsc/src/sys/logging/plog.c /petsc/src/sys/objects/aoptions.c /petsc/src/sys/objects/inherit.c /petsc/src/sys/objects/options.c /petsc/src/sys/utils/str.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/linesearch/interface/taolinesearch.c /petsc/src/ts/adapt/interface/tsadapt.c /petsc/src/ts/characteristic/interface/characteristic.c /petsc/src/ts/examples/tutorials/ex14.c /petsc/src/ts/examples/tutorials/makefile /petsc/src/ts/examples/tutorials/power_grid/ex3adj_events.c /petsc/src/ts/examples/tutorials/power_grid/ex5.c /petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9bus.c /petsc/src/ts/impls/implicit/gl/gladapt.c /petsc/src/ts/interface/tscreate.c /petsc/src/ts/trajectory/interface/traj.c /petsc/src/ts/utils/dmts.c /petsc/src/vec/is/ao/impls/mapping/aomapping.c /petsc/src/vec/is/ao/interface/ao.c /petsc/src/vec/is/is/interface/isreg.c /petsc/src/vec/is/sf/interface/sf.c /petsc/src/vec/is/utils/isltog.c /petsc/src/vec/is/utils/vsectionis.c /petsc/src/vec/pf/interface/pf.c /petsc/src/vec/vec/interface/veccreate.c /petsc/src/vec/vec/utils/vscat.c
302440fd	13-Apr-2015	Barry Smith <bsmith@mcs.anl.gov>	fixed missing CHKERRQ() detected by clang's --analyze /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/src/dm/dt/interface/dtfe.c /petsc/src/dm/dt/interface/dtfv.c /petsc/src/dm/examples/tutorials/ex13f90.F90 /petsc/src/dm/impls/da/da2.c /petsc/src/dm/impls/network/network.c /petsc/src/dm/impls/patch/patchcreate.c /petsc/src/dm/impls/plex/f90-custom/zplexf90.c /petsc/src/dm/impls/plex/plex.c /petsc/src/dm/impls/plex/plexdistribute.c /petsc/src/dm/impls/plex/plexfem.c /petsc/src/dm/impls/plex/plexgmsh.c /petsc/src/dm/impls/plex/plexindices.c /petsc/src/dm/impls/plex/plexinterpolate.c /petsc/src/dm/impls/plex/plexorient.c /petsc/src/dm/impls/plex/plexreorder.c /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/ksp/impls/fcg/fcg.c /petsc/src/ksp/pc/impls/bddc/bddcfetidp.c /petsc/src/ksp/pc/impls/bddc/bddcnullspace.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/impls/bddc/bddcscalingbasic.c /petsc/src/ksp/pc/impls/gamg/classical.c /petsc/src/ksp/pc/impls/gamg/gamg.c /petsc/src/ksp/pc/impls/gasm/gasm.c /petsc/src/mat/impls/aij/seq/bas/spbas_cholesky.h /petsc/src/snes/impls/composite/snescomposite.c aspin.c /petsc/src/snes/interface/snesj.c /petsc/src/snes/interface/snesob.c /petsc/src/snes/utils/dmplexsnes.c /petsc/src/snes/utils/f90-custom/zdmplexsnesf90.c /petsc/src/sys/classes/bag/bag.c /petsc/src/sys/classes/draw/interface/dmarker.c /petsc/src/sys/fileio/sysio.c /petsc/src/sys/ftn-custom/zutils.c /petsc/src/sys/objects/inherit.c /petsc/src/sys/objects/subcomm.c /petsc/src/sys/utils/ftn-custom/zpbarrierf.c /petsc/src/sys/webclient/box.c /petsc/src/sys/webclient/google.c /petsc/src/tao/bound/impls/blmvm/blmvm.c /petsc/src/tao/bound/impls/gpcg/gpcg.c /petsc/src/tao/bound/impls/tron/tron.c /petsc/src/tao/bound/utils/isutil.c /petsc/src/tao/complementarity/impls/asls/asfls.c /petsc/src/tao/complementarity/impls/asls/asils.c /petsc/src/tao/complementarity/impls/ssls/ssfls.c /petsc/src/tao/complementarity/impls/ssls/ssils.c /petsc/src/tao/constrained/impls/ipm/ipm.c /petsc/src/tao/interface/taosolver.c /petsc/src/tao/leastsquares/impls/pounders/pounders.c /petsc/src/tao/linesearch/impls/morethuente/morethuente.c /petsc/src/tao/linesearch/impls/owarmijo/owarmijo.c /petsc/src/tao/linesearch/interface/taolinesearch.c /petsc/src/tao/matrix/lmvmmat.c /petsc/src/tao/matrix/submatfree.c /petsc/src/tao/pde_constrained/impls/lcl/lcl.c /petsc/src/tao/unconstrained/impls/cg/taocg.c /petsc/src/tao/unconstrained/impls/neldermead/neldermead.c /petsc/src/tao/unconstrained/impls/nls/nls.c /petsc/src/tao/unconstrained/impls/ntr/ntr.c /petsc/src/ts/event/tsevent.c /petsc/src/ts/impls/eimex/eimex.c /petsc/src/ts/impls/explicit/rk/rk.c /petsc/src/ts/impls/implicit/theta/theta.c /petsc/src/ts/impls/rosw/rosw.c /petsc/src/ts/interface/ts.c /petsc/src/vec/is/ao/impls/mapping/ftn-custom/zaomappingf.c
af0996ce	11-Apr-2015	Barry Smith <bsmith@mcs.anl.gov>	updated PETSc directory layout to match standard packaging strategies include/petsc finclude,private,mpiuni lib/petsc conf bin/petsc* /petsc/bin/PetscBinaryIO.py /petsc/bin/PetscBinaryIO_tests.py /petsc/bin/configVars.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/checkBuilds.py /petsc/bin/maint/generateetags.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/generators/matlab.py /petsc/bin/maint/submitPatch.py /petsc/bin/maint/toclapack.sh /petsc/bin/maint/xclude /petsc/bin/mpiexec.sshsync /petsc/bin/petsc_conf.py /petsc/bin/petsc_gen_xdmf.py /petsc/bin/petsclogformat.py /petsc/bin/petscmpiexec /petsc/bin/petscnagupgrade.py /petsc/bin/portabilitycheck.py /petsc/config/BuildSystem/config/base.py /petsc/config/BuildSystem/config/compilerFlags.py /petsc/config/BuildSystem/config/compilerOptions.py /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/framework.py /petsc/config/BuildSystem/config/functions.py /petsc/config/BuildSystem/config/headers.py /petsc/config/BuildSystem/config/libraries.py /petsc/config/BuildSystem/config/package.py /petsc/config/BuildSystem/config/packages/BlasLapack.py /petsc/config/BuildSystem/config/packages/Chaco.py /petsc/config/BuildSystem/config/packages/Chombo.py /petsc/config/BuildSystem/config/packages/MOAB.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/MPICH.py /petsc/config/BuildSystem/config/packages/MUMPS.py /petsc/config/BuildSystem/config/packages/Matlab.py /petsc/config/BuildSystem/config/packages/OpenMPI.py /petsc/config/BuildSystem/config/packages/PARTY.py /petsc/config/BuildSystem/config/packages/PTScotch.py /petsc/config/BuildSystem/config/packages/PaStiX.py /petsc/config/BuildSystem/config/packages/SuiteSparse.py /petsc/config/BuildSystem/config/packages/SuperLU.py /petsc/config/BuildSystem/config/packages/SuperLU_DIST.py /petsc/config/BuildSystem/config/packages/SuperLU_MT.py /petsc/config/BuildSystem/config/packages/Triangle.py /petsc/config/BuildSystem/config/packages/Trilinos.py /petsc/config/BuildSystem/config/packages/Zoltan.py /petsc/config/BuildSystem/config/packages/afterimage.py /petsc/config/BuildSystem/config/packages/boost.py /petsc/config/BuildSystem/config/packages/c2html.py /petsc/config/BuildSystem/config/packages/cmake.py /petsc/config/BuildSystem/config/packages/ctetgen.py /petsc/config/BuildSystem/config/packages/cuda.py /petsc/config/BuildSystem/config/packages/cusp.py /petsc/config/BuildSystem/config/packages/elemental.py /petsc/config/BuildSystem/config/packages/exodusii.py /petsc/config/BuildSystem/config/packages/f2cblaslapack.py /petsc/config/BuildSystem/config/packages/fblaslapack.py /petsc/config/BuildSystem/config/packages/fiat.py /petsc/config/BuildSystem/config/packages/glut.py /petsc/config/BuildSystem/config/packages/hwloc.py /petsc/config/BuildSystem/config/packages/hypre.py /petsc/config/BuildSystem/config/packages/lgrind.py /petsc/config/BuildSystem/config/packages/make.py /petsc/config/BuildSystem/config/packages/metis.py /petsc/config/BuildSystem/config/packages/mkl_cpardiso.py /petsc/config/BuildSystem/config/packages/mkl_pardiso.py /petsc/config/BuildSystem/config/packages/ml.py /petsc/config/BuildSystem/config/packages/mpe.py /petsc/config/BuildSystem/config/packages/mpi4py.py /petsc/config/BuildSystem/config/packages/netcdf.py /petsc/config/BuildSystem/config/packages/opencl.py /petsc/config/BuildSystem/config/packages/opengl.py /petsc/config/BuildSystem/config/packages/opengles.py /petsc/config/BuildSystem/config/packages/openmp.py /petsc/config/BuildSystem/config/packages/openmpclasses.py /petsc/config/BuildSystem/config/packages/pARMS.py /petsc/config/BuildSystem/config/packages/parmetis.py /petsc/config/BuildSystem/config/packages/petsc4py.py /petsc/config/BuildSystem/config/packages/pthread.py /petsc/config/BuildSystem/config/packages/pthreadclasses.py /petsc/config/BuildSystem/config/packages/scalapack.py /petsc/config/BuildSystem/config/packages/scientificpython.py /petsc/config/BuildSystem/config/packages/sowing.py /petsc/config/BuildSystem/config/packages/spai.py /petsc/config/BuildSystem/config/packages/sprng.py /petsc/config/BuildSystem/config/packages/ssl.py /petsc/config/BuildSystem/config/packages/sundials.py /petsc/config/BuildSystem/config/packages/tchem.py /petsc/config/BuildSystem/config/packages/tetgen.py /petsc/config/BuildSystem/config/packages/valgrind.py /petsc/config/BuildSystem/config/packages/viennacl.py /petsc/config/BuildSystem/config/programs.py /petsc/config/BuildSystem/config/python.py /petsc/config/BuildSystem/config/setCompilers.py /petsc/config/BuildSystem/config/sourceControl.py /petsc/config/BuildSystem/config/types.py /petsc/config/BuildSystem/config/utilities/cacheDetails.py /petsc/config/BuildSystem/config/utilities/debuggers.py /petsc/config/BuildSystem/config/utilities/getResidentSetSize.py /petsc/config/BuildSystem/logger.py /petsc/config/PETSc/Configure.py /petsc/config/PETSc/options/indexTypes.py /petsc/config/PETSc/options/installDir.py /petsc/config/PETSc/options/libraryOptions.py /petsc/config/PETSc/options/petscclone.py /petsc/config/PETSc/packages/tchem.py /petsc/config/PETSc/petsc.py /petsc/config/builder.py /petsc/config/builder2.py /petsc/config/cmakeboot.py /petsc/config/cmakegen.py /petsc/config/configure.py /petsc/config/examples/arch-freebsd-pkgs-opt.py /petsc/config/examples/arch-linux-pkgs-opt.py /petsc/config/gmakegen.py /petsc/config/install.py /petsc/gmakefile /petsc/include/makefile /petsc/include/petsc/finclude/ftn-custom/makefile /petsc/include/petsc/finclude/ftn-custom/petscdm.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmcomposite.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmda.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmdef.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmhide.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmplex.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmplexdef.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmredundant.h90 /petsc/include/petsc/finclude/ftn-custom/petscdmshell.h90 /petsc/include/petsc/finclude/ftn-custom/petscdt.h90 /petsc/include/petsc/finclude/ftn-custom/petscdtdef.h90 /petsc/include/petsc/finclude/ftn-custom/petscdthide.h90 /petsc/include/petsc/finclude/ftn-custom/petscis.h90 /petsc/include/petsc/finclude/ftn-custom/petscisdef.h90 /petsc/include/petsc/finclude/ftn-custom/petscishide.h90 /petsc/include/petsc/finclude/ftn-custom/petscksp.h90 /petsc/include/petsc/finclude/ftn-custom/petsckspdef.h90 /petsc/include/petsc/finclude/ftn-custom/petscksphide.h90 /petsc/include/petsc/finclude/ftn-custom/petscmat.h90 /petsc/include/petsc/finclude/ftn-custom/petscmatdef.h90 /petsc/include/petsc/finclude/ftn-custom/petscmathide.h90 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/petsc/include/petsc/finclude/petscao.h /petsc/include/petsc/finclude/petscaodef.h /petsc/include/petsc/finclude/petscbag.h /petsc/include/petsc/finclude/petscbagdef.h /petsc/include/petsc/finclude/petscdef.h /petsc/include/petsc/finclude/petscdm.h /petsc/include/petsc/finclude/petscdm.h90 /petsc/include/petsc/finclude/petscdmcomposite.h90 /petsc/include/petsc/finclude/petscdmda.h /petsc/include/petsc/finclude/petscdmda.h90 /petsc/include/petsc/finclude/petscdmdadef.h /petsc/include/petsc/finclude/petscdmdef.h /petsc/include/petsc/finclude/petscdmplex.h /petsc/include/petsc/finclude/petscdmplex.h90 /petsc/include/petsc/finclude/petscdmplexdef.h /petsc/include/petsc/finclude/petscdmredundant.h90 /petsc/include/petsc/finclude/petscdmshell.h90 /petsc/include/petsc/finclude/petscdraw.h /petsc/include/petsc/finclude/petscdrawdef.h /petsc/include/petsc/finclude/petscdt.h90 /petsc/include/petsc/finclude/petscerror.h /petsc/include/petsc/finclude/petscerrordef.h /petsc/include/petsc/finclude/petscis.h /petsc/include/petsc/finclude/petscis.h90 /petsc/include/petsc/finclude/petscisdef.h /petsc/include/petsc/finclude/petscksp.h /petsc/include/petsc/finclude/petscksp.h90 /petsc/include/petsc/finclude/petsckspdef.h /petsc/include/petsc/finclude/petsclog.h /petsc/include/petsc/finclude/petsclogdef.h /petsc/include/petsc/finclude/petscmat.h /petsc/include/petsc/finclude/petscmat.h90 /petsc/include/petsc/finclude/petscmatdef.h /petsc/include/petsc/finclude/petscmatfactorinfosize.h /petsc/include/petsc/finclude/petscmatinfosize.h /petsc/include/petsc/finclude/petscpc.h /petsc/include/petsc/finclude/petscpc.h90 /petsc/include/petsc/finclude/petscpcdef.h /petsc/include/petsc/finclude/petscsnes.h /petsc/include/petsc/finclude/petscsnes.h90 /petsc/include/petsc/finclude/petscsnesdef.h /petsc/include/petsc/finclude/petscsnesfas.h /petsc/include/petsc/finclude/petscsnesfasdef.h /petsc/include/petsc/finclude/petscsys.h 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14eb1c5c	16-Mar-2015	Matthew G. 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fe998a80	13-Jan-2015	Barry Smith <bsmith@mcs.anl.gov>	manual merge of conflict /petsc/.gitignore /petsc/.hgignore /petsc/CONTRIBUTING /petsc/LICENSE /petsc/bin/FASTMathInstaller.py /petsc/bin/configVars.py /petsc/bin/maint/PetscStaticFunctionCandidates.py /petsc/bin/maint/builddist /petsc/bin/maint/buildtest /petsc/bin/maint/confignightly/cg /petsc/bin/maint/confignightly/cg2 /petsc/bin/maint/findvisibleprivatefunctions /petsc/bin/maint/generateetags.py /petsc/bin/maint/generatefortranstubs.py /petsc/bin/maint/generators/matlab.py /petsc/bin/maint/getpdflabels.py /petsc/bin/maint/rebuildtar /petsc/bin/maint/toclapack.sh /petsc/bin/maint/update-docs.py /petsc/bin/maint/xclude /petsc/bin/mpiexec.sshsync /petsc/bin/petsc-mpiexec.uni /petsc/bin/petsc-pythonscripts/PetscBinaryIO.py /petsc/bin/petsc-pythonscripts/PetscBinaryIO_tests.py /petsc/bin/petsc-pythonscripts/petsc_conf.py /petsc/bin/petsc-pythonscripts/petsc_gen_xdmf.py /petsc/bin/petsc-pythonscripts/petsclogformat.py 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d78e9bee	25-Apr-2014	Peter Brune <brune@mcs.anl.gov>	SNESNASM: Explicitly set the NASM type to PC_ASM_BASIC in ASPIN. aspin.c
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724f369d	07-Mar-2014	Peter Brune <brune@mcs.anl.gov>	SNESASPIN: Fix for the case of zero iterations In the case where the absolute tolerance is satisfied in the first subSNES step, the operators are never set on the subKSP, leading to an error in the SNESASPIN: Fix for the case of zero iterations In the case where the absolute tolerance is satisfied in the first subSNES step, the operators are never set on the subKSP, leading to an error in the outer KSP iteration. For the sake of generality, have the ASPIN Jacobian call KSPSolve() instead of PCApply() when multiplying. show more ... /petsc/config/PETSc/Configure.py /petsc/include/petsc-private/taodmimpl.h /petsc/include/petsccusp.h /petsc/include/petscdmda.h /petsc/include/petscis.h /petsc/include/petsctao.h /petsc/include/petsctaolinesearch.h /petsc/include/petscviennacl.h /petsc/makefile /petsc/src/dm/impls/da/dadestroy.c /petsc/src/docs/website/documentation/faq.html /petsc/src/snes/impls/gs/gssecant.c aspin.c /petsc/src/snes/interface/snes.c /petsc/src/sys/error/err.c /petsc/src/sys/error/errtrace.c /petsc/src/sys/logging/plog.c /petsc/src/sys/objects/pinit.c /petsc/src/tao/complementarity/impls/asls/asfls.c /petsc/src/tao/complementarity/impls/asls/asils.c /petsc/src/tao/complementarity/impls/ssls/ssls.c /petsc/src/tao/util/tao_util.c
3d2707ba	03-Mar-2014	Barry Smith <bsmith@mcs.anl.gov>	Merge branch 'master' into barry/nonlinearsolvertable Conflicts: include/petscsnes.h /petsc/bin/matlab/classes/matlabheader.h /petsc/conf/rules /petsc/config/BuildSystem/config/compilers.py /petsc/config/BuildSystem/config/packages/MPI.py /petsc/config/BuildSystem/config/packages/netcdf.py /petsc/include/finclude/petscmat.h /petsc/include/finclude/petscsysdef.h /petsc/include/petsc-private/kspimpl.h /petsc/include/petsc-private/matimpl.h /petsc/include/petsc-private/pcimpl.h /petsc/include/petsc-private/snesimpl.h /petsc/include/petsc-private/taodmimpl.h /petsc/include/petsc-private/taoimpl.h /petsc/include/petsc-private/tsimpl.h /petsc/include/petscksp.h /petsc/include/petscmat.h /petsc/include/petscpc.h /petsc/include/petscsnes.h /petsc/include/petscsys.h /petsc/include/petsctao.h /petsc/include/petscts.h /petsc/makefile /petsc/src/contrib/fun3d/comp/flow.c /petsc/src/contrib/fun3d/incomp/flow.c 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d1e9a80f	25-Feb-2014	Barry Smith <bsmith@mcs.anl.gov>	the compute Jacobian functions for SNES and TS now do not take a MatStructure flag /petsc/include/petsc-private/matimpl.h /petsc/include/petsc-private/snesimpl.h /petsc/include/petsc-private/tsimpl.h /petsc/include/petscmat.h /petsc/include/petscsnes.h /petsc/include/petscts.h /petsc/src/docs/tex/manual/part2.tex /petsc/src/docs/website/documentation/changes/dev.html /petsc/src/ksp/pc/impls/bddc/bddc.c /petsc/src/ksp/pc/impls/bddc/bddcprivate.c /petsc/src/ksp/pc/interface/precon.c /petsc/src/mat/impls/aij/mpi/fdmpiaij.c /petsc/src/mat/impls/aij/seq/aij.h /petsc/src/mat/impls/baij/mpi/mpibaij.h /petsc/src/mat/impls/baij/seq/baij.h /petsc/src/mat/matfd/fdmatrix.c /petsc/src/snes/examples/tests/ex1.c /petsc/src/snes/examples/tests/ex11.c /petsc/src/snes/examples/tests/ex12f.F /petsc/src/snes/examples/tests/ex15.c /petsc/src/snes/examples/tests/ex16.c /petsc/src/snes/examples/tests/ex17.c /petsc/src/snes/examples/tests/ex1f.F 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