| /honee/examples/ |
| H A D | conv_plot.py | 45 data = group[1] 46 data = data.sort_values('rel_error') 47 p = data['degree'].values[0] 48 h = 1 / data[res] 49 E = data['rel_error']
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| /honee/problems/ |
| H A D | stg_shur14.c | 71 CeedScalar *wall_dist = &stg_ctx->data[stg_ctx->offsets.wall_dist]; in ReadStgInflow() 72 CeedScalar *eps = &stg_ctx->data[stg_ctx->offsets.eps]; in ReadStgInflow() 73 CeedScalar *lt = &stg_ctx->data[stg_ctx->offsets.lt]; in ReadStgInflow() 74 …CeedScalar(*ubar)[stg_ctx->nprofs] = (CeedScalar(*)[stg_ctx->nprofs]) & stg_ctx->data[stg_ctx->off… in ReadStgInflow() 100 …CeedScalar(*cij)[stg_ctx->nprofs] = (CeedScalar(*)[stg_ctx->nprofs]) & stg_ctx->data[stg_ctx->offs… in ReadStgInflow() 127 CeedScalar *phi = &stg_ctx->data[stg_ctx->offsets.phi]; in ReadStgRand() 128 …CeedScalar(*d)[stg_ctx->nmodes] = (CeedScalar(*)[stg_ctx->nmodes]) & stg_ctx->data[stg_ctx->of… in ReadStgRand() 129 …CeedScalar(*sigma)[stg_ctx->nmodes] = (CeedScalar(*)[stg_ctx->nmodes]) & stg_ctx->data[stg_ctx->of… in ReadStgRand() 193 temp_ctx->total_bytes = sizeof(*temp_ctx) + total_num_scalars * sizeof(temp_ctx->data[0]); in GetStgContextData() 203 CeedScalar *kappa = &(*stg_ctx)->data[(*stg_ctx)->offsets.kappa]; in GetStgContextData() [all …]
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| H A D | sgs_dd_model.c | 611 …dd_temp->total_bytes = sizeof(*sgsdd_ctx) + total_num_scalars * sizeof(sgsdd_ctx->data[0]); in SgsDDContextFill() 618 …PetscCall(PhastaDatFileReadToArrayReal(comm, file_path, &sgsdd_ctx->data[sgsdd_ctx->offsets.bias1]… in SgsDDContextFill() 620 …PetscCall(PhastaDatFileReadToArrayReal(comm, file_path, &sgsdd_ctx->data[sgsdd_ctx->offsets.bias2]… in SgsDDContextFill() 622 …PetscCall(PhastaDatFileReadToArrayReal(comm, file_path, &sgsdd_ctx->data[sgsdd_ctx->offsets.out_sc… in SgsDDContextFill() 628 …PetscCall(TransposeMatrix(temp, &sgsdd_ctx->data[sgsdd_ctx->offsets.weight1], num_inputs, num_neur… in SgsDDContextFill() 635 …PetscCall(TransposeMatrix(temp, &sgsdd_ctx->data[sgsdd_ctx->offsets.weight2], num_neurons, num_out… in SgsDDContextFill()
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| /honee/doc/ |
| H A D | auxiliary.md | 308 …aining of machine-learning models, normally uses *a priori* (already gathered) data stored on disk. 309 …the scale of the problem grows and the data that is saved to disk reduces to a small percentage of… 310 One way of working around this is to perform whatever data analysis while the simulation is activel… 311 This is known as *in situ* (in place) data analysis. 313 HONEE can facilitate *in situ* data analysis using [SmartSim](https://www.craylabs.org/docs/overvie… 314 HONEE will periodically place data into an in-memory database and a separate process can then read … 315 SmartSim is responsible for orchestrating the running of HONEE and the data-analysis processes. 318 …learning interaction with normal HPC applications, any data-analysis process can be used e.g. data… 348 The most basic functionality for *in situ* data analysis is to simply place the solution vector int… 362 - Place solution data into the smartsim database [all …]
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| H A D | theory.md | 431 The data-driven SGS model implemented here uses a small neural network to compute the SGS term. 445 The data-driven model parameters in the examples directory are not accurate and are for regression … 450 There are two different modes for using the data-driven model: fused and sequential. 482 - Path to directory with data-driven model parameters (weights, biases, etc.) 564 Data flow for initializing function (which creates the context data struct) is given below:
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| /honee/qfunctions/ |
| H A D | stg_shur14.h | 39 const CeedScalar *prof_wd = &stg_ctx->data[stg_ctx->offsets.wall_dist]; in InterpolateProfile() 40 const CeedScalar *prof_eps = &stg_ctx->data[stg_ctx->offsets.eps]; in InterpolateProfile() 41 const CeedScalar *prof_lt = &stg_ctx->data[stg_ctx->offsets.lt]; in InterpolateProfile() 42 const CeedScalar *prof_ubar = &stg_ctx->data[stg_ctx->offsets.ubar]; in InterpolateProfile() 43 const CeedScalar *prof_cij = &stg_ctx->data[stg_ctx->offsets.cij]; in InterpolateProfile() 126 const CeedScalar *kappa = &stg_ctx->data[stg_ctx->offsets.kappa]; in CalcSpectrum() 155 const CeedScalar *kappa = &stg_ctx->data[stg_ctx->offsets.kappa]; in StgShur14Calc() 156 const CeedScalar *phi = &stg_ctx->data[stg_ctx->offsets.phi]; in StgShur14Calc() 157 const CeedScalar *sigma = &stg_ctx->data[stg_ctx->offsets.sigma]; in StgShur14Calc() 158 const CeedScalar *d = &stg_ctx->data[stg_ctx->offsets.d]; in StgShur14Calc() [all …]
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| H A D | sgs_dd_model.h | 30 CeedScalar data[1]; member 42 const CeedScalar *bias1 = &sgsdd_ctx->data[sgsdd_ctx->offsets.bias1]; in DataDrivenInference() 43 const CeedScalar *bias2 = &sgsdd_ctx->data[sgsdd_ctx->offsets.bias2]; in DataDrivenInference() 44 const CeedScalar *weight1 = &sgsdd_ctx->data[sgsdd_ctx->offsets.weight1]; in DataDrivenInference() 45 const CeedScalar *weight2 = &sgsdd_ctx->data[sgsdd_ctx->offsets.weight2]; in DataDrivenInference() 59 CopyN(&sgsdd_ctx->data[sgsdd_ctx->offsets.out_scaling], (CeedScalar *)new_bounds, 12); in ComputeSgsDD_Fused() 185 CopyN(&sgsdd_ctx->data[sgsdd_ctx->offsets.out_scaling], (CeedScalar *)new_bounds, 12); in ComputeSgsDDNodal_Sequential_Outputs()
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| H A D | stg_shur14_type.h | 39 CeedScalar data[1]; // !< Holds concatenated scalar array data member
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| /honee/src/spanstats/ |
| H A D | spanstats.c | 220 static PetscErrorCode SpanwiseStatisticsSetupDataDestroy(SpanStatsSetupData data) { in SpanwiseStatisticsSetupDataDestroy() argument 224 PetscCall(CeedElemRestrictionGetCeed(data->elem_restr_parent_x, &ceed)); in SpanwiseStatisticsSetupDataDestroy() 225 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_parent_x)); in SpanwiseStatisticsSetupDataDestroy() 226 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_parent_stats)); in SpanwiseStatisticsSetupDataDestroy() 227 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_parent_colloc)); in SpanwiseStatisticsSetupDataDestroy() 228 PetscCallCeed(ceed, CeedElemRestrictionDestroy(&data->elem_restr_child_colloc)); in SpanwiseStatisticsSetupDataDestroy() 229 PetscCallCeed(ceed, CeedBasisDestroy(&data->basis_x)); in SpanwiseStatisticsSetupDataDestroy() 230 PetscCallCeed(ceed, CeedBasisDestroy(&data->basis_stats)); in SpanwiseStatisticsSetupDataDestroy() 231 PetscCallCeed(ceed, CeedVectorDestroy(&data->x_coord)); in SpanwiseStatisticsSetupDataDestroy() 232 PetscCall(PetscFree(data)); in SpanwiseStatisticsSetupDataDestroy()
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| H A D | cflpe.c | 178 ctx->data = spanstats; in SpanwiseStatisticsSetup_CflPe() 190 SpanStatsCtx spanstats = ctx->data; in TSMonitor_SpanwiseStatisticsCflPe()
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| H A D | turbulence.c | 201 ctx->data = spanstats; in SpanwiseStatisticsSetup_Turbulence() 213 SpanStatsCtx spanstats = ctx->data; in TSMonitor_SpanwiseStatisticsTurbulence()
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| /honee/examples/postprocess/ |
| H A D | vortexshedding.py | 31 data=df, 37 data=df,
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| /honee/src/smartsim/ |
| H A D | solution.c | 42 ctx->data = smartsimsol; in TSMonitor_SmartSimSolutionSetup() 54 SmartSimSolutionData smartsimsol = ctx->data; in TSMonitor_SmartSimSolution()
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| /honee/ |
| H A D | .gitignore | 64 perf.data
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| H A D | Doxyfile | 455 # with only public data fields or simple typedef fields will be shown inline in 1108 # Note that doxygen will use the data processed and written to standard output 1891 # search data is written to a file for indexing by an external tool. With the
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| /honee/src/ |
| H A D | monitor_cfl.c | 124 ctx->data = monitor_ctx; in SetupMontiorCfl() 139 MonitorCflCtx monitor_ctx = (MonitorCflCtx)ctx->data; in TSMonitor_Cfl()
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| H A D | monitor_totalkineticenergy.c | 118 ctx->data = monitor_ctx; in SetupMontiorTotalKineticEnergy() 133 MonitorTotalKE monitor_ctx = (MonitorTotalKE)ctx->data; in TSMonitor_TotalKineticEnergy()
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| H A D | misc.c | 179 int FreeContextPetsc(void *data) { in FreeContextPetsc() argument 180 if (PetscFree(data)) return CeedError(NULL, CEED_ERROR_ACCESS, "PetscFree failed"); in FreeContextPetsc()
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| H A D | differential_filter.c | 335 ctx->data = diff_filter; in TSMonitor_DifferentialFilterSetup() 344 DiffFilterData diff_filter = (DiffFilterData)ctx->data; in TSMonitor_DifferentialFilter()
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