| /petsc/src/sys/classes/viewer/impls/hdf5/ |
| H A D | hdf5v.c | 109 if (hdf5->file_id) PetscCallHDF5(H5Fclose, (hdf5->file_id)); in PetscViewerFileClose_HDF5()
118 if (hdf5->file_id) PetscCallHDF5(H5Fflush, (hdf5->file_id, H5F_SCOPE_LOCAL)); in PetscViewerFlush_HDF5()
127 PetscCallHDF5(H5Pclose, (hdf5->dxpl_id)); in PetscViewerDestroy_HDF5()
312 …PetscCallHDF5(H5Pset_dxpl_mpio, (hdf5->dxpl_id, flg ? H5FD_MPIO_COLLECTIVE : H5FD_MPIO_INDEPENDENT… in PetscViewerHDF5SetCollective_HDF5()
365 PetscCallHDF5(H5Pget_dxpl_mpio, (hdf5->dxpl_id, &mode)); in PetscViewerHDF5GetCollective_HDF5()
406 if (hdf5->file_id) PetscCallHDF5(H5Fclose, (hdf5->file_id)); in PetscViewerFileSetName_HDF5()
412 PetscCallHDF5(H5Pset_fapl_mpio, (plist_id, PetscObjectComm((PetscObject)viewer), MPI_INFO_NULL)); in PetscViewerFileSetName_HDF5()
447 PetscCallHDF5(H5Pclose, (plist_id)); in PetscViewerFileSetName_HDF5()
916 PetscCallHDF5(H5Gclose, (groupId)); in PetscViewerHDF5WriteGroup()
1201 PetscCallHDF5(H5Tset_size, (dtype, len + 1)); in PetscViewerHDF5WriteAttribute()
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| /petsc/src/dm/impls/da/ |
| H A D | gr2.c | 514 PetscCallHDF5(H5Pset_chunk, (chunkspace, (int)dim, chunkDims)); in VecView_MPI_HDF5_DA()
519 PetscCallHDF5(H5Dset_extent, (dset_id, dims)); in VecView_MPI_HDF5_DA()
521 PetscCallHDF5(H5Sclose, (filespace)); in VecView_MPI_HDF5_DA()
550 PetscCallHDF5(H5Sselect_hyperslab, (filespace, H5S_SELECT_SET, offset, NULL, count, NULL)); in VecView_MPI_HDF5_DA()
553 PetscCallHDF5(H5Dwrite, (dset_id, memscalartype, memspace, filespace, hdf5->dxpl_id, x)); in VecView_MPI_HDF5_DA()
554 PetscCallHDF5(H5Fflush, (file_id, H5F_SCOPE_GLOBAL)); in VecView_MPI_HDF5_DA()
566 if (group != file_id) PetscCallHDF5(H5Gclose, (group)); in VecView_MPI_HDF5_DA()
567 PetscCallHDF5(H5Sclose, (filespace)); in VecView_MPI_HDF5_DA()
568 PetscCallHDF5(H5Sclose, (memspace)); in VecView_MPI_HDF5_DA()
569 PetscCallHDF5(H5Dclose, (dset_id)); in VecView_MPI_HDF5_DA()
[all …]
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| /petsc/src/vec/is/utils/hdf5/ |
| H A D | hdf5io.c | 63 PetscCallHDF5(H5Gclose, (h->group)); in PetscViewerHDF5ReadFinalize_Private()
64 PetscCallHDF5(H5Sclose, (h->dataspace)); in PetscViewerHDF5ReadFinalize_Private()
65 PetscCallHDF5(H5Dclose, (h->dataset)); in PetscViewerHDF5ReadFinalize_Private()
220 PetscCallHDF5(H5Sselect_hyperslab, (ctx->dataspace, H5S_SELECT_SET, offset, NULL, count, NULL)); in PetscViewerHDF5ReadSelectHyperslab_Private()
230 PetscCallHDF5(H5Dread, (h->dataset, datatype, memspace, h->dataspace, hdf5->dxpl_id, arr)); in PetscViewerHDF5ReadArray_Private()
289 PetscCallHDF5(H5Sclose, (memspace)); in PetscViewerHDF5Load_Internal()
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| /petsc/src/vec/is/is/impls/general/ |
| H A D | general.c | 372 PetscCallHDF5(H5Pset_chunk, (chunkspace, (int)dim, chunkDims)); in ISView_General_HDF5()
375 PetscCallHDF5(H5Pclose, (chunkspace)); in ISView_General_HDF5()
378 PetscCallHDF5(H5Dset_extent, (dset_id, dims)); in ISView_General_HDF5()
380 PetscCallHDF5(H5Sclose, (filespace)); in ISView_General_HDF5()
416 PetscCallHDF5(H5Sselect_hyperslab, (filespace, H5S_SELECT_SET, offset, NULL, count, NULL)); in ISView_General_HDF5()
423 PetscCallHDF5(H5Dwrite, (dset_id, inttype, memspace, filespace, hdf5->dxpl_id, ind)); in ISView_General_HDF5()
424 PetscCallHDF5(H5Fflush, (file_id, H5F_SCOPE_GLOBAL)); in ISView_General_HDF5()
428 PetscCallHDF5(H5Gclose, (group)); in ISView_General_HDF5()
429 PetscCallHDF5(H5Sclose, (filespace)); in ISView_General_HDF5()
430 PetscCallHDF5(H5Sclose, (memspace)); in ISView_General_HDF5()
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| /petsc/include/petsc/private/ |
| H A D | viewerhdf5impl.h | 18 #define PetscCallHDF5(func, args) \ macro
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| /petsc/src/vec/vec/impls/mpi/ |
| H A D | pdvec.c | 556 PetscCallHDF5(H5Pset_chunk, (chunkspace, (int)dim, chunkDims)); in VecView_MPI_HDF5()
559 PetscCallHDF5(H5Pclose, (chunkspace)); in VecView_MPI_HDF5()
562 PetscCallHDF5(H5Dset_extent, (dset_id, dims)); in VecView_MPI_HDF5()
564 PetscCallHDF5(H5Sclose, (filespace)); in VecView_MPI_HDF5()
608 PetscCallHDF5(H5Sselect_hyperslab, (filespace, H5S_SELECT_SET, offset, NULL, count, NULL)); in VecView_MPI_HDF5()
615 PetscCallHDF5(H5Dwrite, (dset_id, memscalartype, memspace, filespace, hdf5->dxpl_id, x)); in VecView_MPI_HDF5()
616 PetscCallHDF5(H5Fflush, (file_id, H5F_SCOPE_GLOBAL)); in VecView_MPI_HDF5()
620 PetscCallHDF5(H5Gclose, (group)); in VecView_MPI_HDF5()
621 PetscCallHDF5(H5Sclose, (filespace)); in VecView_MPI_HDF5()
622 PetscCallHDF5(H5Sclose, (memspace)); in VecView_MPI_HDF5()
[all …]
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| /petsc/src/dm/impls/plex/hdf5/ |
| H A D | plexhdf5.c | 396 PetscCallHDF5(H5Dclose, (dset)); in DMSequenceGetLength_HDF5_Internal()
397 PetscCallHDF5(H5Gclose, (group)); in DMSequenceGetLength_HDF5_Internal()
1876 PetscCallHDF5(ReadLabelStratumHDF5_Distribute_Private, (stratumIS, ctx, &newStratumIS)); in ReadLabelStratumHDF5_Static()
1942 …PetscCallHDF5(H5Literate, (groupId, H5_INDEX_NAME, H5_ITER_NATIVE, &idx, ReadLabelHDF5_Static, ctx… in DMPlexLabelsLoad_HDF5_Internal()
1943 PetscCallHDF5(H5Gclose, (groupId)); in DMPlexLabelsLoad_HDF5_Internal()
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