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Searched refs:stash (Results 1 – 25 of 28) sorted by relevance

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/petsc/src/mat/utils/
H A Dmatstash.c28 PetscErrorCode MatStashCreate_Private(MPI_Comm comm, PetscInt bs, MatStash *stash) in MatStashCreate_Private() argument
35 stash->comm = comm; in MatStashCreate_Private()
37 PetscCall(PetscCommGetNewTag(stash->comm, &stash->tag1)); in MatStashCreate_Private()
38 PetscCall(PetscCommGetNewTag(stash->comm, &stash->tag2)); in MatStashCreate_Private()
39 PetscCallMPI(MPI_Comm_size(stash->comm, &stash->size)); in MatStashCreate_Private()
40 PetscCallMPI(MPI_Comm_rank(stash->comm, &stash->rank)); in MatStashCreate_Private()
41 PetscCall(PetscMalloc1(2 * stash->size, &stash->flg_v)); in MatStashCreate_Private()
42 for (i = 0; i < 2 * stash->size; i++) stash->flg_v[i] = -1; in MatStashCreate_Private()
44 nopt = stash->size; in MatStashCreate_Private()
49 else if (nopt == stash->size) max = opt[stash->rank]; in MatStashCreate_Private()
[all …]
H A Dpheap.c12 PetscInt stash; /* stash grows down, this points to last item */ member
71 h->stash = h->alloc; in PetscHeapCreate()
86 …stash, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Addition would exceed allocation %" PetscInt_FM… in PetscHeapAdd()
146 loc = --h->stash; in PetscHeapStash()
155 while (h->stash < h->alloc) { in PetscHeapUnstash()
156 PetscInt id = Id(h, h->stash), value = Value(h, h->stash); in PetscHeapUnstash()
157 h->stash++; in PetscHeapUnstash()
180 … "Heap size %" PetscInt_FMT " with %" PetscInt_FMT " stashed\n", h->end - 1, h->alloc - h->stash)); in PetscHeapView()
184 …PetscCall(PetscIntView(2 * (h->alloc - h->stash), (const PetscInt *)(h->base + h->stash), viewer)); in PetscHeapView()
/petsc/src/vec/vec/utils/
H A Dvecstash.c19 PetscErrorCode VecStashCreate_Private(MPI_Comm comm, PetscInt bs, VecStash *stash) in VecStashCreate_Private() argument
26 stash->comm = comm; in VecStashCreate_Private()
27 PetscCall(PetscCommGetNewTag(stash->comm, &stash->tag1)); in VecStashCreate_Private()
28 PetscCall(PetscCommGetNewTag(stash->comm, &stash->tag2)); in VecStashCreate_Private()
29 PetscCallMPI(MPI_Comm_size(stash->comm, &stash->size)); in VecStashCreate_Private()
30 PetscCallMPI(MPI_Comm_rank(stash->comm, &stash->rank)); in VecStashCreate_Private()
32 nopt = stash->size; in VecStashCreate_Private()
37 else if (nopt == stash->size) max = opt[stash->rank]; in VecStashCreate_Private()
38 else if (stash->rank < nopt) max = opt[stash->rank]; in VecStashCreate_Private()
40 stash->umax = max; in VecStashCreate_Private()
[all …]
/petsc/src/vec/vec/impls/mpi/
H A Dpbvec.c50 (*v)->stash.donotstash = win->stash.donotstash; in VecDuplicateWithArray_MPI()
51 (*v)->stash.ignorenegidx = win->stash.ignorenegidx; in VecDuplicateWithArray_MPI()
56 (*v)->stash.bs = win->stash.bs; in VecDuplicateWithArray_MPI()
93 v->stash.donotstash = w->stash.donotstash; in VecDuplicateVecs_MPI_GEMV()
94 v->stash.ignorenegidx = w->stash.ignorenegidx; in VecDuplicateVecs_MPI_GEMV()
95 v->stash.bs = w->stash.bs; in VecDuplicateVecs_MPI_GEMV()
115 V->stash.donotstash = flag; in VecSetOption_MPI()
118 V->stash.ignorenegidx = flag; in VecSetOption_MPI()
210 if (X->stash.donotstash) PetscFunctionReturn(PETSC_SUCCESS); in VecAssemblyBegin_MPI_BTS()
217 …PetscCallMPI(MPIU_Allreduce((PetscEnum *)&X->stash.insertmode, (PetscEnum *)&addv, 1, MPIU_ENUM, M… in VecAssemblyBegin_MPI_BTS()
[all …]
H A Dpdvec.c45 PetscCall(VecStashDestroy_Private(&v->stash)); in VecDestroy_MPI()
713 const PetscInt start = xin->map->range[xin->stash.rank]; in VecGetValues_MPI()
718 if (xin->stash.ignorenegidx && ix[i] < 0) continue; in VecGetValues_MPI()
730 const PetscBool ignorenegidx = xin->stash.ignorenegidx; in VecSetValues_MPI()
731 const PetscBool donotstash = xin->stash.donotstash; in VecSetValues_MPI()
732 const PetscMPIInt rank = xin->stash.rank; in VecSetValues_MPI()
739 …PetscCheck(xin->stash.insertmode != INSERT_VALUES || addv != ADD_VALUES, PETSC_COMM_SELF, PETSC_ER… in VecSetValues_MPI()
740 …PetscCheck(xin->stash.insertmode != ADD_VALUES || addv != INSERT_VALUES, PETSC_COMM_SELF, PETSC_ER… in VecSetValues_MPI()
743 xin->stash.insertmode = addv; in VecSetValues_MPI()
758 PetscCall(VecStashValue_Private(&xin->stash, row, yv)); in VecSetValues_MPI()
[all …]
/petsc/include/petsc/private/
H A Dvecimpl.h159 VecStash stash, bstash; /* used for storing off-proc values during assembly */ member
267 static inline PetscErrorCode VecStashValue_Private(VecStash *stash, PetscInt row, PetscScalar value) in VecStashValue_Private() argument
271 if (((stash)->n + 1) > (stash)->nmax) PetscCall(VecStashExpand_Private(stash, 1)); in VecStashValue_Private()
272 (stash)->idx[(stash)->n] = row; in VecStashValue_Private()
273 (stash)->array[(stash)->n] = value; in VecStashValue_Private()
274 (stash)->n++; in VecStashValue_Private()
286 static inline PetscErrorCode VecStashValuesBlocked_Private(VecStash *stash, PetscInt row, PetscScal… in VecStashValuesBlocked_Private() argument
288 PetscInt stash_bs = (stash)->bs; in VecStashValuesBlocked_Private()
292 if (((stash)->n + 1) > (stash)->nmax) PetscCall(VecStashExpand_Private(stash, 1)); in VecStashValuesBlocked_Private()
293 array = (stash)->array + stash_bs * (stash)->n; in VecStashValuesBlocked_Private()
[all …]
H A Dveccupmimpl.h959 (*y)->stash.donotstash = v->stash.donotstash; in Duplicate_CUPMBase()
960 (*y)->stash.ignorenegidx = v->stash.ignorenegidx; in Duplicate_CUPMBase()
/petsc/src/vec/vec/impls/shared/
H A Dshvec.c25 (*v)->stash.donotstash = win->stash.donotstash; in VecDuplicate_Shared()
26 (*v)->stash.ignorenegidx = win->stash.ignorenegidx; in VecDuplicate_Shared()
/petsc/src/mat/tests/output/
H A Dex29_1.out6 Pop two items, increment, and place in stash:
12 After unpacking the stash:
/petsc/src/mat/impls/preallocator/
H A Dmatpreallocator.c17 PetscCall(MatStashDestroy_Private(&A->stash)); in MatDestroy_Preallocator()
38 PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)A), 1, &A->stash)); in MatSetUp_Preallocator()
61 PetscCall(MatStashValuesRow_Private(&A->stash, key.i, n, cols, values, PETSC_FALSE)); in MatSetValues_Preallocator()
88 PetscCall(MatStashScatterBegin_Private(A, &A->stash, A->rmap->range)); in MatAssemblyBegin_Preallocator()
89 PetscCall(MatStashGetInfo_Private(&A->stash, &nstash, &reallocs)); in MatAssemblyBegin_Preallocator()
105 PetscCall(MatStashScatterGetMesg_Private(&A->stash, &n, &row, &col, &val, &flg)); in MatAssemblyEnd_Preallocator()
121 PetscCall(MatStashScatterEnd_Private(&A->stash)); in MatAssemblyEnd_Preallocator()
/petsc/src/mat/impls/aij/mpi/
H A Dmpihashmat.h30 …PetscCall(MatStashValuesRow_Private(&A->stash, rows[r], n, cols, PetscSafePointerPlusOffset(values… in MatSetValues_MPI_Hash()
32 …PetscCall(MatStashValuesCol_Private(&A->stash, rows[r], n, cols, PetscSafePointerPlusOffset(values… in MatSetValues_MPI_Hash()
63 PetscCall(MatStashScatterBegin_Private(A, &A->stash, A->rmap->range)); in MatAssemblyBegin_MPI_Hash()
64 PetscCall(MatStashGetInfo_Private(&A->stash, &nstash, &reallocs)); in MatAssemblyBegin_MPI_Hash()
80 PetscCall(MatStashScatterGetMesg_Private(&A->stash, &n, &row, &col, &val, &flg)); in MatFinishScatterAndSetValues_MPI_Hash()
95 PetscCall(MatStashScatterEnd_Private(&A->stash)); in MatFinishScatterAndSetValues_MPI_Hash()
143 PetscCall(MatStashDestroy_Private(&A->stash)); in MatDestroy_MPI_Hash()
H A Dmpiaij.c22 PetscCall(MatStashDestroy_Private(&mat->stash)); in MatReset_MPIAIJ()
625 …PetscCall(MatStashValuesRow_Private(&mat->stash, im[i], n, in, PetscSafePointerPlusOffset(v, i * n… in MatSetValues_MPIAIJ()
627 …PetscCall(MatStashValuesCol_Private(&mat->stash, im[i], n, in, PetscSafePointerPlusOffset(v, i), m… in MatSetValues_MPIAIJ()
767 PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); in MatAssemblyBegin_MPIAIJ()
768 PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); in MatAssemblyBegin_MPIAIJ()
787 PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); in MatAssemblyEnd_MPIAIJ()
802 PetscCall(MatStashScatterEnd_Private(&mat->stash)); in MatAssemblyEnd_MPIAIJ()
6805 PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)B), 1, &B->stash)); in MatCreate_MPIAIJ()
8159 …PetscCall(MatStashValuesRow_Private(&mat->stash, im[i], n, in, v + i * n, (PetscBool)(ignorezeroen… in matsetvaluesmpiaij_()
8161 …PetscCall(MatStashValuesCol_Private(&mat->stash, im[i], n, in, v + i, m, (PetscBool)(ignorezeroent… in matsetvaluesmpiaij_()
/petsc/src/mat/impls/scalapack/
H A Dmatscalapack.c152 …PetscCall(MatStashValuesRow_Private(&A->stash, rows[i], 1, cols + j, roworiented ? vals + i * nc +… in MatSetValues_ScaLAPACK()
1254 PetscCall(MatStashDestroy_Private(&A->stash)); in MatDestroy_ScaLAPACK()
1313 PetscCall(MatStashScatterBegin_Private(A, &A->stash, NULL)); in MatAssemblyBegin_ScaLAPACK()
1314 PetscCall(MatStashGetInfo_Private(&A->stash, &nstash, &reallocs)); in MatAssemblyBegin_ScaLAPACK()
1330 PetscCall(MatStashScatterGetMesg_Private(&A->stash, &n, &row, &col, &val, &flg)); in MatAssemblyEnd_ScaLAPACK()
1349 PetscCall(MatStashScatterEnd_Private(&A->stash)); in MatAssemblyEnd_ScaLAPACK()
1514 static PetscErrorCode MatStashScatterBegin_ScaLAPACK(Mat mat, MatStash *stash, PetscInt *owners) in MatStashScatterBegin_ScaLAPACK() argument
1517 PetscInt size = stash->size, nsends; in MatStashScatterBegin_ScaLAPACK()
1520 MPI_Comm comm = stash->comm; in MatStashScatterBegin_ScaLAPACK()
1522 …PetscMPIInt tag1 = stash->tag1, tag2 = stash->tag2, *sizes, *nlengths, nreceives, insends, … in MatStashScatterBegin_ScaLAPACK()
[all …]
/petsc/src/vec/vec/impls/mpi/kokkos/
H A Dmpikok.kokkos.cxx314 v->stash.donotstash = w->stash.donotstash; in VecDuplicateVecs_MPIKokkos_GEMV()
315 v->stash.ignorenegidx = w->stash.ignorenegidx; in VecDuplicateVecs_MPIKokkos_GEMV()
316 v->stash.bs = w->stash.bs; in VecDuplicateVecs_MPIKokkos_GEMV()
/petsc/src/vec/vec/impls/mpi/mpiviennacl/
H A Dmpiviennacl.cxx134 (*v)->stash.donotstash = win->stash.donotstash; in VecDuplicate_MPIViennaCL()
135 (*v)->stash.ignorenegidx = win->stash.ignorenegidx; in VecDuplicate_MPIViennaCL()
/petsc/src/mat/impls/adj/mpi/
H A Dmpiadj.c463 PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)A), 1, &A->stash)); in MatSetValues_MPIAdj()
473 PetscCall(MatStashValuesRow_Private(&A->stash, key.i, n, cols, values, PETSC_FALSE)); in MatSetValues_MPIAdj()
496 PetscCall(MatStashScatterBegin_Private(A, &A->stash, A->rmap->range)); in MatAssemblyBegin_MPIAdj()
497 PetscCall(MatStashGetInfo_Private(&A->stash, &nstash, &reallocs)); in MatAssemblyBegin_MPIAdj()
515 PetscCall(MatStashScatterGetMesg_Private(&A->stash, &n, &row, &col, &val, &flg)); in MatAssemblyEnd_MPIAdj()
530 PetscCall(MatStashScatterEnd_Private(&A->stash)); in MatAssemblyEnd_MPIAdj()
531 PetscCall(MatStashDestroy_Private(&A->stash)); in MatAssemblyEnd_MPIAdj()
745 PetscCall(MatStashDestroy_Private(&B->stash)); in MatMPIAdjSetPreallocation_MPIAdj()
/petsc/src/mat/impls/sell/mpi/
H A Dmpisell.c238 …PetscCall(MatStashValuesRow_Private(&mat->stash, im[i], n, in, v + i * n, (PetscBool)(ignorezeroen… in MatSetValues_MPISELL()
240 …PetscCall(MatStashValuesCol_Private(&mat->stash, im[i], n, in, v + i, m, (PetscBool)(ignorezeroent… in MatSetValues_MPISELL()
290 PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); in MatAssemblyBegin_MPISELL()
291 PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); in MatAssemblyBegin_MPISELL()
308 PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); in MatAssemblyEnd_MPISELL()
315 PetscCall(MatStashScatterEnd_Private(&mat->stash)); in MatAssemblyEnd_MPISELL()
503 PetscCall(MatStashDestroy_Private(&mat->stash)); in MatDestroy_MPISELL()
1821 PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)B), 1, &B->stash)); in MatCreate_MPISELL()
/petsc/src/vec/vec/impls/seq/
H A Dbvec2.c491 const PetscBool ignorenegidx = xin->stash.ignorenegidx; in VecGetValues_Seq()
510 const PetscBool ignorenegidx = xin->stash.ignorenegidx; in VecSetValues_Seq()
593 …PetscCheck(!nneg || x->stash.ignorenegidx, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Found a neg… in VecSetPreallocationCOO_Seq()
653 if (op == VEC_IGNORE_NEGATIVE_INDICES) v->stash.ignorenegidx = flag; in VecSetOption_Seq()
/petsc/src/vec/vec/interface/
H A Dvector.c42 PetscCall(VecStashGetInfo_Private(&vec->stash, nstash, reallocs)); in VecStashGetInfo()
784 …PetscCheck(!vec->stash.n && !vec->bstash.n, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONGSTATE, "Must call … in VecView()
1304 PetscCall(VecStashSetInitialSize_Private(&vec->stash, size)); in VecStashSetInitialSize()
1940 s = &v->stash; in VecStashView()
/petsc/src/mat/impls/sbaij/mpi/
H A Dmpisbaij.c12 PetscCall(MatStashDestroy_Private(&mat->stash)); in MatDestroy_MPISBAIJ()
393 PetscCall(MatStashValuesRow_Private(&mat->stash, im[i], n_loc, in_loc, v_loc, PETSC_FALSE)); in MatSetValues_MPISBAIJ()
776 PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); in MatAssemblyBegin_MPISBAIJ()
778 PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); in MatAssemblyBegin_MPISBAIJ()
780 PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); in MatAssemblyBegin_MPISBAIJ()
800 PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); in MatAssemblyEnd_MPISBAIJ()
815 PetscCall(MatStashScatterEnd_Private(&mat->stash)); in MatAssemblyEnd_MPISBAIJ()
2093 PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)B), 1, &B->stash)); in MatCreate_MPISBAIJ()
/petsc/src/mat/impls/baij/mpi/
H A Dmpibaij.c13 PetscCall(MatStashDestroy_Private(&mat->stash)); in MatDestroy_MPIBAIJ()
316 PetscCall(MatStashValuesRow_Private(&mat->stash, im[i], n, in, v + i * n, PETSC_FALSE)); in MatSetValues_MPIBAIJ()
318 PetscCall(MatStashValuesCol_Private(&mat->stash, im[i], n, in, v + i, m, PETSC_FALSE)); in MatSetValues_MPIBAIJ()
544 PetscCall(MatStashValuesRow_Private(&mat->stash, im[i], n, in, v + i * n, PETSC_FALSE)); in MatSetValues_MPIBAIJ_HT()
546 PetscCall(MatStashValuesCol_Private(&mat->stash, im[i], n, in, v + i, m, PETSC_FALSE)); in MatSetValues_MPIBAIJ_HT()
891 PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); in MatAssemblyBegin_MPIBAIJ()
893 PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); in MatAssemblyBegin_MPIBAIJ()
914 PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); in MatAssemblyEnd_MPIBAIJ()
929 PetscCall(MatStashScatterEnd_Private(&mat->stash)); in MatAssemblyEnd_MPIBAIJ()
2864 PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)B), 1, &B->stash)); in MatCreate_MPIBAIJ()
/petsc/src/mat/impls/dense/mpi/
H A Dmpidense.c157 …PetscCall(MatStashValuesRow_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i… in MatSetValues_MPIDense()
159 …PetscCall(MatStashValuesCol_Private(&mat->stash, idxm[i], n, idxn, PetscSafePointerPlusOffset(v, i… in MatSetValues_MPIDense()
387 PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range)); in MatAssemblyBegin_MPIDense()
388 PetscCall(MatStashGetInfo_Private(&mat->stash, &nstash, &reallocs)); in MatAssemblyBegin_MPIDense()
404 PetscCall(MatStashScatterGetMesg_Private(&mat->stash, &n, &row, &col, &val, &flg)); in MatAssemblyEnd_MPIDense()
419 PetscCall(MatStashScatterEnd_Private(&mat->stash)); in MatAssemblyEnd_MPIDense()
702 PetscCall(MatStashDestroy_Private(&mat->stash)); in MatDestroy_MPIDense()
1738 PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)mat), 1, &mat->stash)); in MatCreate_MPIDense()
/petsc/src/mat/impls/hypre/
H A Dmhypre.c1389 PetscCall(MatStashDestroy_Private(&A->stash));
1449 PetscCall(MatStashScatterGetMesg_Private(&A->stash, &n, &row, &col, &val, &flg));
1465 PetscCall(MatStashScatterEnd_Private(&A->stash));
1600 …if (!hA->donotstash) PetscCall(MatStashValuesRow_Private(&A->stash, rows[i], nzc, cscr[0], (PetscS…
2072 PetscCall(MatStashScatterBegin_Private(mat, &mat->stash, mat->rmap->range));
2439 PetscCall(MatStashCreate_Private(PetscObjectComm((PetscObject)B), 1, &B->stash));
/petsc/src/vec/vec/impls/seq/seqviennacl/
H A Dvecviennacl.cxx1128 (*V)->stash.ignorenegidx = win->stash.ignorenegidx; in VecDuplicate_SeqViennaCL()
/petsc/include/
H A Dpetscvec.h528 #define VecCheckAssembled(v) PetscCheck(v->stash.insertmode == NOT_SET_VALUES, PETSC_COMM_SELF, PET…

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