feat(bc): Shrink jac_data_size to that being used

feat(bc_def): Add AssertPointer to Get functions

refactor: Delete SimpleBC struct

bc(inflow): Convert inflow bc to use BCDef functions

bc(outflow): Convert outflow bc to use BCDef functions

bc(freestream): Convert freestream bc to use BCDef functions

bc(slip): Convert slip bc to use BCDef functions

bc_def: Add IFunction and IJacobian set and apply

bc_def: Add user context

bc_def: Add dm member to struct

And it's associated Get/Set functions

(!109) Add HONEE Git and Version info commands

dm_utils: Add DMGetCoordinateNumComps

dm_utils: Move function defs to separate header file

refactor: Use TSMonitorSetFromOptions for spanstats

refactor: Explicitly pass spanstats context

refactor: Move generic spanstats function to separate file

fix(bc): Correct PetscOptionsItems pointer status

PETSc !7517 changed this from a struct to a pointer to struct. This
needs to be reflected in these functions

fix: Make -help flag work correctly

feat: Change default checkpoint_interval to 0

Binary files are no longer the standard restart file format (CGNS is),
therefore this should be avoided.

feat: Add -ts_eval_solutions_view for -ts_eval_times

Writes out intermediate solutions specified by `-ts_eval_times`

doc: Add dev note for HoneeCheckFileExtension

fix: Change spanstats struct to pointer-to-struct

feat: Add log statement for spanstats file writing

fix: Don't redirect spanstats struct directly from honee

fix(totalke): Use RHS or IFunction Op, whichever exists