Update the use of Collective on in the manual pages to reflect the new styleCommit-type: style-fix, documentationThanks-to: Patrick Sanan <patrick.sanan@gmail.com>
Man pages: remove Concepts: fieldsThese fields were previously stripped from the man pages by logic removed in 21a59cba2737d49dc2f0bd12c08db0d2a3f3f209Remove these fields from all man pages (but
Man pages: remove Concepts: fieldsThese fields were previously stripped from the man pages by logic removed in 21a59cba2737d49dc2f0bd12c08db0d2a3f3f209Remove these fields from all man pages (but not from examples).This is accomplished with GNU sed (gsed on OS X), with the following commands.*Warning* that this type of command can corrupt a .git directory,so be cautious in reusing or modifying these commands. They first lookfor and delete matching lines with a following line consisting of only whitespace,and then delete any remaining matching lines. find src -type f -not -path "*/examples/*" -not -name "*.html" -not -name "*.bib" -exec gsed -i '/Concepts:/ {N; /\n\s*$/d}' {} + find src -type f -not -path "*/examples/*" -not -name "*.html" -not -name "*.bib" -exec gsed -i '/Concepts:/d' {} + find include -type f -not -path "*/examples/*" -not -name "*.html" -not -name "*.bib" -exec gsed -i '/Concepts:/ {N; /\n\s*$/d}' {} + find include -type f -not -path "*/examples/*" -not -name "*.html" -not -name "*.bib" -exec gsed -i '/Concepts:/d' {} +Hints on the sed command obtained from: https://unix.stackexchange.com/questions/100754/how-to-delete-a-specific-line-and-the-following-blank-line-using-gnu-sed
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Work on PetscViewerString. Fix use of PetscInt -> size_t, add new functionality, add usage by basic solver objects, add test caseCommit-type: style-fix, feature, documentation, example
Minor cleanup, remove some outdated code, remove unneeded constructs, improve manual pages slightly, add missing test caseTime: 2.5 hours
Remove the use and definition of __FUNCT__ throughout the codeSince all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETScTime: 1.5 hoursThanks-t
Remove the use and definition of __FUNCT__ throughout the codeSince all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETScTime: 1.5 hoursThanks-to: Andreas Mang <andreas@ices.utexas.edu>
Updated and simplified Fortran interfaceReduced from 4 distinct approaches to using PETSc from Fortran to 1No more .h90 files (Fortran 90 functionality is now always available)Parameters and func
Updated and simplified Fortran interfaceReduced from 4 distinct approaches to using PETSc from Fortran to 1No more .h90 files (Fortran 90 functionality is now always available)Parameters and function prototypes are now provide through Fortran modules, not includes;only #define are provided in the petscXXXdef.h filesPETSc objects can be declared as either type(tXXX) or XXX. For example type(tVec) or VecMoved now private Fortran include files out of public include directory since uses don't use them;they are only used to generate the Fortran modulesEasier to support and test; we can now easily add more function prototypesAlso had to rework generation of manual pages to consistently use MANSEC and SUBMANSECsince these variables also handle how the Fortran modules are generated.Time: 57 hours
added manual pages for missing PETSCVIEWERXXX such as PETSCVIEWERBINARYThanks-to: apostol <apostol.faliagas@gmail.com>
Some progress on correct PetscViewerGetSubViewer() still needs testing
merged PetscViewerGetSingleton() and PetscViewerGetSubcomm() into PetscViewerGetSubViewer()Does not currently work, needs fixes to work correctly recursively
updated PETSc directory layout to match standard packaging strategiesinclude/petsc finclude,private,mpiunilib/petsc confbin/petsc*
manual merge of conflict
convert to PetscMalloc1()better handling of string viewer when running out of space
Sys: drop explicit type arguments from PetscNew() and PetscNewLog()git grep -l 'PetscNew\(Log\)\?(' -- $1 | xargs perl -pi -e 's@PetscNew\([^,;()]+ *, *@PetscNew(@;s@PetscNewLog\(([^,;()]+) *,[^,
Sys: drop explicit type arguments from PetscNew() and PetscNewLog()git grep -l 'PetscNew\(Log\)\?(' -- $1 | xargs perl -pi -e 's@PetscNew\([^,;()]+ *, *@PetscNew(@;s@PetscNewLog\(([^,;()]+) *,[^,;()]+, *@PetscNewLog($1,@'
Change all PETSC_EXTERN_C to PETSC_EXTERNHg-commit: 8d2ebbb193fb583bccc64015e35640c4e08c3426
updated from EXTERN_C_BEGIN/END through sys directoryHg-commit: ee6b7ef2f48ce66402e7e807302de19506ce15df
Remove petscviewer.h from petscsys.hMuch of sys is independent of viewer. Viewer is used in so many otherplaces that it is now included by petscvec.h.Hg-commit: 1d745f01618aa51d3043fb1f87b0546f6
Remove petscviewer.h from petscsys.hMuch of sys is independent of viewer. Viewer is used in so many otherplaces that it is now included by petscvec.h.Hg-commit: 1d745f01618aa51d3043fb1f87b0546f60e6e730
removed a bunch of duplicate unneeded includes of std include filesHg-commit: b6c9f3e2b0eb8b7277fe131cc83beede5d495522
Uncrustified src/sys/*Hg-commit: 9f71677807bad7b55428a6cc0f5ccc5052e91805
removed trailing spaces from all filesHg-commit: 1cfa55059afe46c5145e0e830cd797b97216abfb
reorg of src/sys directorydirectories that define objects now in the classes subdirectoryrename several confusing name directoriesHg-commit: b2612422c63ac4afe82112892d9efda808f3d601
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