ViewerVTK: use header_type="UInt64" to use 64-bit byte counts in binary appendedThis feature is mentioned under `HeaderType` in these docs, and seems tohave been supported for a long time. http
ViewerVTK: use header_type="UInt64" to use 64-bit byte counts in binary appendedThis feature is mentioned under `HeaderType` in these docs, and seems tohave been supported for a long time. https://kitware.github.io/paraview-docs/v5.7.0/python/paraview.simple.XMLPUnstructuredGridWriter.htmlIt was not documented in the usual file format docs, which have not beenupdated in ages. https://vtk.org/wp-content/uploads/2015/04/file-formats.pdf (PDF was created in 2003) https://kitware.github.io/vtk-examples/site/VTKFileFormats/#xml-file-formatsI've tested that these files work in Paraview and VisIt.Thanks-to: Dave May <dave.mayhem23@gmail.com>
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Merge remote-tracking branch 'origin/release'
Fix Typos
Make PetscErrorCode a non-discardable enum
Copyediting and cleanup of later sections of user manual; add links to manual from PetscLog and PetscView manual pagesCommit-type: documentation/spend 8h
Remove unneeded " on xxx" from most Collective comments in manual pagesThe phrase was unneeded 99% of the timeI did not remove in the dm directory since another MR is still active that affects th
Remove unneeded " on xxx" from most Collective comments in manual pagesThe phrase was unneeded 99% of the timeI did not remove in the dm directory since another MR is still active that affects that directoryCommit-type: documentation/spend 20m
source code format changes due to .clang-format changes
Transform all header-guards into ifndefs to make clang-format ignore them for preprocessor indentation
Remove parent, parentid, flops, time, mem, and memchildren. Deprecate PetscLogObjectParent(), PetscLogObjectMemory(), and PetscNewLog()
makefile: fix typo - petsckdir.mk -> petscdir.mk
Fix up all manual pages in src/sys directoryCommit-type: documentation/spend 10h
Remove braces from one-liners
clang-format: convert PETSc sources to comply with clang-format
Add -include */petscdir.mk to makefile that lacked itfor i in `git ls-files | grep makefile | xargs grep -L petscdir.mk`; do echo $i ; str=`echo $i |sed -e 's?[-a-zA-Z0-9]*/?../?g' -e 's?makef
Add -include */petscdir.mk to makefile that lacked itfor i in `git ls-files | grep makefile | xargs grep -L petscdir.mk`; do echo $i ; str=`echo $i |sed -e 's?[-a-zA-Z0-9]*/?../?g' -e 's?makefile?petsckdir.mk?g'` ; cp $i tmp echo "-include $str" > $i cat tmp >> $idoneCommit-type: makefile, housekeeping/spend 15m
remove garbage from makefilesIncluding * unused FLAGS variables * All: lib that did not work * stray blank lines etcCommit-type: housekeeping/spend 1h
Merge branch 'psanan/docs-sphinx-man-pages' into 'main'Integrate Man Pages into Sphinx DocsCloses #1132 and #1015See merge request petsc/petsc!4989
Remove PetscCheckFalse() from sys directoryCommit-type: housekeeping/spend 30m
Docs: bulk add backticks to .seealso man page fields```pythonimport osimport reimport fileinputdef _process_word(word): comma = "," if word.endswith(",") else "" return "`%s`%s" % (wor
Docs: bulk add backticks to .seealso man page fields```pythonimport osimport reimport fileinputdef _process_word(word): comma = "," if word.endswith(",") else "" return "`%s`%s" % (word.rstrip(","), comma)def _process_stripped_line(line): return " ".join(map(_process_word, line.split()))start_pattern = re.compile(r"^( *\.seealso:? )(.*$)")def process_file(filename_full): with fileinput.FileInput(filename_full, inplace=True) as f: in_block = False for line in f: line_stripped = line.strip() # end ".seealso blocks" on a blank line or C-style comment close line_modified = None if not line_stripped: in_block = False elif line_stripped.endswith("*/"): in_block = False else: match = re.match(start_pattern, line) # not stripped line if match: indent = " " * len(match.group(1)) in_block = True line_modified = match.group( 1) + _process_stripped_line( match.group(2).strip()) elif in_block: line_modified = indent + _process_stripped_line( line_stripped) if line_modified: print(line_modified) # prints to the file else: print(line, end="") # prints to the fileBASE_DIRS = ["src", "include"]EXT = [".c", ".cxx", ".cpp", ".cu", ".h", ".hpp", ".hxx"]EXCLUDE_DIRS = ["tests", "tutorials", "ftn-auto", "ftn-custom", "benchmarks"]def main(): """ Process everything """ for base in BASE_DIRS: for root, dirs, files in os.walk(base): for filename in files: if os.path.splitext(filename)[1] in EXT: filename_full = os.path.join(root, filename) print("FILE ---", filename_full) process_file(filename_full) for exclude_dir in EXCLUDE_DIRS: if exclude_dir in dirs: dirs.remove(exclude_dir)if __name__ == "__main__": main()```
Remove some PetscCheckFalse()
Do not wrap PetscTryMethod() PetscUseMethod() in PetscCallIt produces shadow declarations and also serves no purpose since these macros do the appropriate error checking alreadyThere may be addit
Do not wrap PetscTryMethod() PetscUseMethod() in PetscCallIt produces shadow declarations and also serves no purpose since these macros do the appropriate error checking alreadyThere may be additions needed for running with a static error checkerCommit-type: error-checking/spend 15mReported-by:Lisandro Dalcin <dalcinl@gmail.com>
The great renaming:- CHKERRQ() -> PetscCall()- CHKERRV() -> PetscCallVoid()- CHKERRMPI() -> PetscCallMPI()- CHKERRABORT() -> PetscCallAbort()- CHKERRCONTINUE() -> PetscCallContinue()- CHKERRXX
The great renaming:- CHKERRQ() -> PetscCall()- CHKERRV() -> PetscCallVoid()- CHKERRMPI() -> PetscCallMPI()- CHKERRABORT() -> PetscCallAbort()- CHKERRCONTINUE() -> PetscCallContinue()- CHKERRXX() -> PetscCallThrow()- CHKERRCXX() -> PetscCallCXX()- CHKERRCUDA() -> PetscCallCUDA()- CHKERRCUBLAS() -> PetscCallCUBLAS()- CHKERRCUSPARSE() -> PetscCallCUSPARSE()- CHKERRCUSOLVER() -> PetscCallCUSOLVER()- CHKERRCUFFT() -> PetscCallCUFFT()- CHKERRCURAND() -> PetscCallCURAND()- CHKERRHIP() -> PetscCallHIP()- CHKERRHIPBLAS() -> PetscCallHIPBLAS()- CHKERRHIPSOLVER() -> PetscCallHIPSOLVER()- CHKERRQ_CEED() -> PetscCallCEED()- CHKERR_FORTRAN_VOID_FUNCTION() -> PetscCallFortranVoidFunction()- CHKERRMKL() -> PetscCallMKL()- CHKERRMMG() -> PetscCallMMG()- CHKERRMMG_NONSTANDARD() -> PetscCallMMG_NONSTANDARD()- CHKERRCGNS() -> PetscCallCGNS()- CHKERRPTSCOTCH() -> PetscCallPTSCOTCH()- CHKERRSTR() -> PetscCallSTR()- CHKERRTC() -> PetscCallTC()
chkerr and friends wrapped
docs: fix antique DMComplex cross-reference -> DMPlex
rename PetscAssert() -> PetscCheck() and PetscAssertDebug() -> PetscAssert()
deprecate PETSC_STATIC_INLINE
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