History log of /petsc/src/sys/yaml/ (Results 26 – 50 of 64)
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2475b7ca30-Jun-2019 Barry Smith <bsmith@mcs.anl.gov>

Remove testing and inserting into petscconf.h items that are not actually used by PETSc

1) PETSC_HAVE_LIBXXXX - which was rarely used
be careful with the package libpng and libjpeg since they hav

Remove testing and inserting into petscconf.h items that are not actually used by PETSc

1) PETSC_HAVE_LIBXXXX - which was rarely used
be careful with the package libpng and libjpeg since they have lib in the name of the package
2) various system include files that are never used or always exist: for example stdlib.h
3) various system functions that are never used or always exist
4) fixes for requires for MUMPS and SuperLU_DIST when dependent packages are installed or not installed (unrelated to the rest of this pull request)
5) packages that always exist such as PETSC_HAVE_BLASLAPACK, or are not used by PETSc such as PETSC_HAVE_NETCFD
6) remove a couple of uses of HAVE_LIB* in the code that were not needed by adjusting the configure code slightly
7) remove all the #if guards for each entry in petscconf.h since petscconf.h already has a guard and
the values are never defined else where the extra guards just make the file cluttered

For a build with about 10 external packages this reduced the size of petscconf.h from 1236 lines to 828/4 around 220 entries.

Commit-type: style-fix, cleanup

Reported-by: Jed Brown <jed@jedbrown.org

show more ...


/petsc/.gitmessage
/petsc/.travis.yml
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/functions.py
/petsc/config/BuildSystem/config/headers.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/MFEM.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/MPICH.py
/petsc/config/BuildSystem/config/packages/MUMPS.py
/petsc/config/BuildSystem/config/packages/Matlab.py
/petsc/config/BuildSystem/config/packages/OpenMPI.py
/petsc/config/BuildSystem/config/packages/SuiteSparse.py
/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/config/BuildSystem/config/packages/Triangle.py
/petsc/config/BuildSystem/config/packages/Trilinos.py
/petsc/config/BuildSystem/config/packages/c2html.py
/petsc/config/BuildSystem/config/packages/cmake.py
/petsc/config/BuildSystem/config/packages/ctetgen.py
/petsc/config/BuildSystem/config/packages/cuda.py
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/config/BuildSystem/config/packages/fblaslapack.py
/petsc/config/BuildSystem/config/packages/hdf5.py
/petsc/config/BuildSystem/config/packages/hypre.py
/petsc/config/BuildSystem/config/packages/lgrind.py
/petsc/config/BuildSystem/config/packages/libjpeg.py
/petsc/config/BuildSystem/config/packages/libpng.py
/petsc/config/BuildSystem/config/packages/make.py
/petsc/config/BuildSystem/config/packages/metis.py
/petsc/config/BuildSystem/config/packages/mkl_sparse.py
/petsc/config/BuildSystem/config/packages/mkl_sparse_optimize.py
/petsc/config/BuildSystem/config/packages/mpi4py.py
/petsc/config/BuildSystem/config/packages/netcdf.py
/petsc/config/BuildSystem/config/packages/openblas.py
/petsc/config/BuildSystem/config/packages/pARMS.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/packages/pnetcdf.py
/petsc/config/BuildSystem/config/packages/slepc.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/config/BuildSystem/config/packages/tetgen.py
/petsc/config/BuildSystem/config/packages/zlib.py
/petsc/config/BuildSystem/config/programs.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/BuildSystem/config/types.py
/petsc/config/BuildSystem/config/utilities/cacheDetails.py
/petsc/config/BuildSystem/config/utilities/getResidentSetSize.py
/petsc/config/BuildSystem/config/utilities/missing.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/options/arch.py
/petsc/config/PETSc/options/libraryOptions.py
/petsc/config/PETSc/options/petscdir.py
/petsc/config/PETSc/options/scalarTypes.py
/petsc/config/configure.py
/petsc/config/examples/arch-c-exodus-dbg-builder.csh
/petsc/config/examples/arch-cray-xc40-knl-opt.py
/petsc/config/examples/arch-cuda-double.csh
/petsc/config/examples/arch-cuda-single.csh
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-jenkins-freebsd-cxx-cmplx-64idx-dbg.py
/petsc/config/examples/arch-jenkins-linux-gcc-pkgs-opt.py
/petsc/config/examples/arch-linux-analyzer.py
/petsc/config/examples/arch-linux-clang-avx.py
/petsc/config/examples/arch-linux-cmplx-gcov.py
/petsc/config/examples/arch-linux-cxx-cmplx-pkgs-64idx.py
/petsc/config/examples/arch-linux-gcc-cxx-avx2.py
/petsc/config/examples/arch-linux-knl.py
/petsc/config/examples/arch-linux-opt-misc.py
/petsc/config/examples/arch-linux-pgi.py
/petsc/config/examples/arch-linux-pkgs-64idx.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-linux-pkgs-dbg-ftn-interfaces.py
/petsc/config/examples/arch-linux-pkgs-gcov.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-linux-pkgs-valgrind.py
/petsc/config/examples/arch-olcf-summit-opt.csh
/petsc/config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6.py
/petsc/config/examples/arch-pardiso.py
/petsc/config/examples/arch-viennacl.py
/petsc/config/examples/misc/arch-arm64-opt.py
/petsc/config/examples/misc/arch-armv7-opt.py
/petsc/config/examples/misc/arch-bgp-ibm-opt.py
/petsc/config/gmakegen.py
/petsc/config/gmakegentest.py
/petsc/config/install.py
/petsc/gmakefile.test
/petsc/include/petsc/finclude/petscao.h
/petsc/include/petsc/finclude/petscbag.h
/petsc/include/petsc/finclude/petscdm.h
/petsc/include/petsc/finclude/petscdmda.h
/petsc/include/petsc/finclude/petscdmlabel.h
/petsc/include/petsc/finclude/petscdmnetwork.h
/petsc/include/petsc/finclude/petscdmplex.h
/petsc/include/petsc/finclude/petscdraw.h
/petsc/include/petsc/finclude/petscerror.h
/petsc/include/petsc/finclude/petscis.h
/petsc/include/petsc/finclude/petscksp.h
/petsc/include/petsc/finclude/petscmat.h
/petsc/include/petsc/finclude/petscpc.h
/petsc/include/petsc/finclude/petscsnes.h
/petsc/include/petsc/finclude/petscsnesfas.h
/petsc/include/petsc/finclude/petscsys.h
/petsc/include/petsc/finclude/petscts.h
/petsc/include/petsc/finclude/petscvec.h
/petsc/include/petsc/finclude/petscviewer.h
/petsc/include/petsc/mpiuni/mpi.h
/petsc/include/petsc/mpiuni/mpiunifdef.h
/petsc/include/petsc/private/dmimpl.h
/petsc/include/petsc/private/f90impl.h
/petsc/include/petsc/private/fortranimpl.h
/petsc/include/petsc/private/hashmap.h
/petsc/include/petsc/private/hashmapi.h
/petsc/include/petsc/private/hashmapij.h
/petsc/include/petsc/private/hashset.h
/petsc/include/petsc/private/hashseti.h
/petsc/include/petsc/private/hashsetij.h
/petsc/include/petsc/private/hashtable.h
/petsc/include/petsc/private/isimpl.h
/petsc/include/petsc/private/kernels/blockinvert.h
/petsc/include/petsc/private/makefile
/petsc/include/petsc/private/matimpl.h
/petsc/include/petsc/private/petscconvestimpl.h
/petsc/include/petsc/private/petscdsimpl.h
/petsc/include/petsc/private/petscfeimpl.h
/petsc/include/petsc/private/petscfptimpl.h
/petsc/include/petsc/private/petscfvimpl.h
/petsc/include/petsc/private/petschypre.h
/petsc/include/petsc/private/petscimpl.h
/petsc/include/petsc/private/sfimpl.h
/petsc/include/petsc/private/snesimpl.h
/petsc/include/petsc/private/vecimpl.h
/petsc/include/petsc/private/viewerhdf5impl.h
/petsc/include/petscao.h
/petsc/include/petscbag.h
/petsc/include/petscbt.h
/petsc/include/petsccharacteristic.h
/petsc/include/petscconvest.h
/petsc/include/petscctable.h
/petsc/include/petsccuda.h
/petsc/include/petscdm.h
/petsc/include/petscdmadaptor.h
/petsc/include/petscdmcomposite.h
/petsc/include/petscdmda.h
/petsc/include/petscdmdatypes.h
/petsc/include/petscdmfield.h
/petsc/include/petscdmforest.h
/petsc/include/petscdmlabel.h
/petsc/include/petscdmmoab.h
/petsc/include/petscdmnetwork.h
/petsc/include/petscdmpatch.h
/petsc/include/petscdmplex.h
/petsc/include/petscdmplextypes.h
/petsc/include/petscdmredundant.h
/petsc/include/petscdmshell.h
/petsc/include/petscdmsliced.h
/petsc/include/petscdmswarm.h
/petsc/include/petscdmtypes.h
/petsc/include/petscdraw.h
/petsc/include/petscdrawtypes.h
/petsc/include/petscds.h
/petsc/include/petscdstypes.h
/petsc/include/petscdt.h
/petsc/include/petscerror.h
/petsc/include/petscfe.h
/petsc/include/petscfetypes.h
/petsc/include/petscfv.h
/petsc/include/petscfvtypes.h
/petsc/include/petscis.h
/petsc/include/petscistypes.h
/petsc/include/petscksp.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscmatcoarsen.h
/petsc/include/petscmatelemental.h
/petsc/include/petscmath.h
/petsc/include/petscmathypre.h
/petsc/include/petscmatlab.h
/petsc/include/petscoptions.h
/petsc/include/petscpc.h
/petsc/include/petscpctypes.h
/petsc/include/petscpf.h
/petsc/include/petscsf.h
/petsc/include/petscsftypes.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petscsystypes.h
/petsc/include/petsctao.h
/petsc/include/petsctime.h
/petsc/include/petscts.h
/petsc/include/petscvalgrind.h
/petsc/include/petscvec.h
/petsc/include/petscversion.h
/petsc/include/petscviennacl.h
/petsc/include/petscviewer.h
/petsc/include/petscviewerhdf5.h
/petsc/include/petscviewersaws.h
/petsc/include/petscviewertypes.h
/petsc/include/petscwebclient.h
/petsc/lib/petsc/bin/PetscBinaryIO.py
/petsc/lib/petsc/bin/petsc_gen_xdmf.py
/petsc/lib/petsc/bin/petscmpiexec
/petsc/lib/petsc/conf/rules
/petsc/lib/petsc/conf/test
/petsc/lib/petsc/conf/variables
/petsc/makefile
/petsc/src/benchmarks/Index.c
/petsc/src/benchmarks/PetscMemcpy.c
/petsc/src/benchmarks/benchmarkExample.py
/petsc/src/benchmarks/makefile
/petsc/src/benchmarks/streams/CUDAVersion.cu
/petsc/src/benchmarks/streams/makefile
/petsc/src/contrib/fun3d/comp/makefile
/petsc/src/contrib/fun3d/incomp/makefile
/petsc/src/dm/dt/dualspace/impls/bdm/dspacebdm.c
/petsc/src/dm/dt/dualspace/impls/bdm/makefile
/petsc/src/dm/dt/dualspace/impls/lagrange/dspacelagrange.c
/petsc/src/dm/dt/dualspace/impls/makefile
/petsc/src/dm/dt/dualspace/interface/dualspace.c
/petsc/src/dm/dt/examples/tests/ex3.c
/petsc/src/dm/dt/examples/tests/ex5.c
/petsc/src/dm/dt/fe/impls/basic/febasic.c
/petsc/src/dm/dt/fe/impls/composite/fecomposite.c
/petsc/src/dm/dt/fe/interface/fe.c
/petsc/src/dm/dt/fe/interface/fegeom.c
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/dt/interface/dtfv.c
/petsc/src/dm/dt/space/impls/point/spacepoint.c
/petsc/src/dm/dt/space/impls/poly/spacepoly.c
/petsc/src/dm/dt/space/impls/subspace/spacesubspace.c
/petsc/src/dm/dt/space/impls/tensor/spacetensor.c
/petsc/src/dm/dt/space/interface/space.c
/petsc/src/dm/examples/tutorials/ex15.c
/petsc/src/dm/examples/tutorials/ex9.c
/petsc/src/dm/examples/tutorials/makefile
/petsc/src/dm/f90-mod/makefile
/petsc/src/dm/f90-mod/petscdmplex.h90
/petsc/src/dm/field/examples/tutorials/ex1.c
/petsc/src/dm/field/impls/ds/dmfieldds.c
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/composite/packm.c
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/dacorn.c
/petsc/src/dm/impls/da/dacreate.c
/petsc/src/dm/impls/da/dadestroy.c
/petsc/src/dm/impls/da/dadist.c
/petsc/src/dm/impls/da/dageometry.c
/petsc/src/dm/impls/da/dagetarray.c
/petsc/src/dm/impls/da/dainterp.c
/petsc/src/dm/impls/da/dalocal.c
/petsc/src/dm/impls/da/dapreallocate.c
/petsc/src/dm/impls/da/fdda.c
/petsc/src/dm/impls/da/ftn-custom/zdaf.c
/petsc/src/dm/impls/da/gr2.c
/petsc/src/dm/impls/da/grvtk.c
/petsc/src/dm/impls/da/hypre/mhyp.c
/petsc/src/dm/impls/forest/examples/tests/ex2.c
/petsc/src/dm/impls/forest/forest.c
/petsc/src/dm/impls/forest/p4est/petsc_p4est_package.h
/petsc/src/dm/impls/forest/p4est/pforest.c
/petsc/src/dm/impls/moab/dmmbfem.cxx
/petsc/src/dm/impls/moab/dmmbutil.cxx
/petsc/src/dm/impls/moab/dmmoab.cxx
/petsc/src/dm/impls/moab/examples/tests/ex1.cxx
/petsc/src/dm/impls/moab/examples/tests/ex2.cxx
/petsc/src/dm/impls/moab/examples/tests/ex3.cxx
/petsc/src/dm/impls/network/network.c
/petsc/src/dm/impls/network/networkcreate.c
/petsc/src/dm/impls/patch/examples/tests/ex1.c
/petsc/src/dm/impls/patch/patchcreate.c
/petsc/src/dm/impls/plex/examples/tests/ex1.c
/petsc/src/dm/impls/plex/examples/tests/ex10.c
/petsc/src/dm/impls/plex/examples/tests/ex12.c
/petsc/src/dm/impls/plex/examples/tests/ex13.c
/petsc/src/dm/impls/plex/examples/tests/ex14.c
/petsc/src/dm/impls/plex/examples/tests/ex15.c
/petsc/src/dm/impls/plex/examples/tests/ex16.c
/petsc/src/dm/impls/plex/examples/tests/ex17.c
/petsc/src/dm/impls/plex/examples/tests/ex18.c
/petsc/src/dm/impls/plex/examples/tests/ex19.c
/petsc/src/dm/impls/plex/examples/tests/ex20.c
/petsc/src/dm/impls/plex/examples/tests/ex21.c
/petsc/src/dm/impls/plex/examples/tests/ex22.c
/petsc/src/dm/impls/plex/examples/tests/ex23.c
/petsc/src/dm/impls/plex/examples/tests/ex24.c
/petsc/src/dm/impls/plex/examples/tests/ex25.c
/petsc/src/dm/impls/plex/examples/tests/ex26.c
/petsc/src/dm/impls/plex/examples/tests/ex27.c
/petsc/src/dm/impls/plex/examples/tests/ex29.c
/petsc/src/dm/impls/plex/examples/tests/ex3.c
/petsc/src/dm/impls/plex/examples/tests/ex31.c
/petsc/src/dm/impls/plex/examples/tests/ex32.c
/petsc/src/dm/impls/plex/examples/tests/ex34.c
/petsc/src/dm/impls/plex/examples/tests/ex4.c
/petsc/src/dm/impls/plex/examples/tests/ex5.c
/petsc/src/dm/impls/plex/examples/tests/ex6.c
/petsc/src/dm/impls/plex/examples/tests/ex7.c
/petsc/src/dm/impls/plex/examples/tests/ex9.c
/petsc/src/dm/impls/plex/examples/tests/output/ex18_8.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_bdm1_2d_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_bdm1_2d_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_bdm1_2d_2.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_bdm1q_2d_0.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_bdm1q_2d_1.out
/petsc/src/dm/impls/plex/examples/tests/output/ex3_bdm1q_2d_2.out
/petsc/src/dm/impls/plex/examples/tutorials/ex2.c
/petsc/src/dm/impls/plex/examples/tutorials/ex6.c
/petsc/src/dm/impls/plex/examples/tutorials/ex7.c
/petsc/src/dm/impls/plex/examples/tutorials/ex8.c
/petsc/src/dm/impls/plex/petscpartmatpart.c
/petsc/src/dm/impls/plex/plex.c
/petsc/src/dm/impls/plex/plexcheckinterface.c
/petsc/src/dm/impls/plex/plexcreate.c
/petsc/src/dm/impls/plex/plexdistribute.c
/petsc/src/dm/impls/plex/plexexodusii.c
/petsc/src/dm/impls/plex/plexfem.c
/petsc/src/dm/impls/plex/plexfluent.c
/petsc/src/dm/impls/plex/plexgeometry.c
/petsc/src/dm/impls/plex/plexglvis.c
/petsc/src/dm/impls/plex/plexgmsh.c
/petsc/src/dm/impls/plex/plexhdf5.c
/petsc/src/dm/impls/plex/plexinterpolate.c
/petsc/src/dm/impls/plex/plexmed.c
/petsc/src/dm/impls/plex/plexpartition.c
/petsc/src/dm/impls/plex/plexpreallocate.c
/petsc/src/dm/impls/plex/plexproject.c
/petsc/src/dm/impls/plex/plexreorder.c
/petsc/src/dm/impls/plex/plexsection.c
/petsc/src/dm/impls/plex/plextree.c
/petsc/src/dm/impls/product/product.c
/petsc/src/dm/impls/redundant/dmredundant.c
/petsc/src/dm/impls/shell/dmshell.c
/petsc/src/dm/impls/sliced/sliced.c
/petsc/src/dm/impls/stag/examples/tutorials/ex4.c
/petsc/src/dm/impls/stag/stag.c
/petsc/src/dm/impls/stag/stag3d.c
/petsc/src/dm/impls/stag/stagutils.c
/petsc/src/dm/impls/swarm/data_bucket.c
/petsc/src/dm/impls/swarm/data_ex.c
/petsc/src/dm/impls/swarm/examples/tests/ex2.c
/petsc/src/dm/impls/swarm/examples/tests/makefile
/petsc/src/dm/impls/swarm/swarm.c
/petsc/src/dm/impls/swarm/swarmpic.c
/petsc/src/dm/impls/swarm/swarmpic_plex.c
/petsc/src/dm/impls/swarm/swarmpic_sort.c
/petsc/src/dm/interface/dlregisdmdm.c
/petsc/src/dm/interface/dm.c
/petsc/src/dm/interface/dmi.c
/petsc/src/dm/interface/dmregall.c
/petsc/src/dm/label/dmlabel.c
/petsc/src/docs/tex/manual/developers.tex
/petsc/src/docs/tex/manual/part2.tex
/petsc/src/docs/website/documentation/changes/dev.html
/petsc/src/docs/website/documentation/faq.html
/petsc/src/docs/website/documentation/installation.html
/petsc/src/docs/website/download/index.html
/petsc/src/docs/website/index.html
/petsc/src/ksp/f90-mod/makefile
/petsc/src/ksp/ksp/examples/tests/ex18.c
/petsc/src/ksp/ksp/examples/tests/ex32.c
/petsc/src/ksp/ksp/examples/tutorials/ex10.c
/petsc/src/ksp/ksp/examples/tutorials/ex27.c
/petsc/src/ksp/ksp/examples/tutorials/ex28.c
/petsc/src/ksp/ksp/examples/tutorials/ex29.c
/petsc/src/ksp/ksp/examples/tutorials/ex35.cxx
/petsc/src/ksp/ksp/examples/tutorials/ex36.cxx
/petsc/src/ksp/ksp/examples/tutorials/ex42.c
/petsc/src/ksp/ksp/examples/tutorials/ex43.c
/petsc/src/ksp/ksp/examples/tutorials/ex49.c
/petsc/src/ksp/ksp/examples/tutorials/ex50.c
/petsc/src/ksp/ksp/examples/tutorials/ex55.c
/petsc/src/ksp/ksp/examples/tutorials/ex56.c
/petsc/src/ksp/ksp/examples/tutorials/ex59.c
/petsc/src/ksp/ksp/examples/tutorials/ex70.c
/petsc/src/ksp/ksp/examples/tutorials/ex72.c
/petsc/src/ksp/ksp/examples/tutorials/ex73.c
/petsc/src/ksp/ksp/examples/tutorials/makefile
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_6_hdf5.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_6_hdf5_dense.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_6_hdf5_rect.out
/petsc/src/ksp/ksp/examples/tutorials/output/ex27_6_hdf5_rect_dense.out
/petsc/src/ksp/ksp/impls/bcgsl/bcgsl.c
/petsc/src/ksp/ksp/impls/cg/cgeig.c
/petsc/src/ksp/ksp/impls/cg/gltr/gltr.c
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/petsc/src/vec/vscat/impls/sf/vscatsf.c
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d083f84901-Jun-2019 Barry Smith <bsmith@mcs.anl.gov>

Update the use of Collective on in the manual pages to reflect the new style

Commit-type: style-fix, documentation
Thanks-to: Patrick Sanan <patrick.sanan@gmail.com>


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/petsc/src/sys/info/verboseinfo.c
/petsc/src/sys/logging/plog.c
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/petsc/src/ts/impls/pseudo/posindep.c
/petsc/src/ts/impls/python/pythonts.c
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/petsc/src/ts/interface/dlregists.c
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/petsc/src/ts/interface/tseig.c
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/petsc/src/ts/interface/tsregall.c
/petsc/src/ts/interface/tsrhssplit.c
/petsc/src/ts/trajectory/interface/traj.c
/petsc/src/vec/is/ao/impls/basic/aobasic.c
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/petsc/src/vec/vec/impls/mpi/commonmpvec.c
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/petsc/src/vec/vec/impls/seq/seqcuda/cudavecimpl.h
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/impls/seq/seqcuda/vecscattercuda.cu
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/petsc/src/vec/vec/impls/seq/vseqcr.c
/petsc/src/vec/vec/impls/shared/shvec.c
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/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/veccreate.c
/petsc/src/vec/vec/interface/vecreg.c
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/petsc/src/vec/vec/interface/vector.c
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/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/vscatfce.c
/petsc/src/vec/vscat/interface/vscreate.c
a8d69d7b19-May-2019 Barry Smith <bsmith@mcs.anl.gov>

Fixed out-dated URLS using make checkbadURLS REPLACE=1

One manual fix of https://en.wikipedia.org/wiki/Buckingham_π_theorem since the automatic tool dropped the first _ for some reason
Manual fix of

Fixed out-dated URLS using make checkbadURLS REPLACE=1

One manual fix of https://en.wikipedia.org/wiki/Buckingham_π_theorem since the automatic tool dropped the first _ for some reason
Manual fix of //faq.html since the automatic tool incorrectly replaced /faq.html to //faq.html in some locations

These are largely updates of http to https but have a variety of other website location changes

Once this branch is in master individual developers can run make checkbadURLS and fix URLs related to their projects manually

Commit-type: bug-fix, documentation

show more ...


/petsc/CODE_OF_CONDUCT.md
/petsc/Jenkinsfile
/petsc/config/BuildSystem/RDict.py
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/compilerFlags.py
/petsc/config/BuildSystem/config/compilerOptions.py
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/headers.py
/petsc/config/BuildSystem/config/libraries.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/ADOLC.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/Chaco.py
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/petsc/src/vec/vscat/examples/output/ex9_1.out
/petsc/src/vec/vscat/impls/makefile
/petsc/src/vec/vscat/impls/mpi1/makefile
/petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.c
/petsc/src/vec/vscat/impls/mpi1/vpscat_mpi1.h
/petsc/src/vec/vscat/impls/mpi3/makefile
/petsc/src/vec/vscat/impls/mpi3/vpscat.c
/petsc/src/vec/vscat/impls/mpi3/vpscat.h
/petsc/src/vec/vscat/impls/seq/makefile
/petsc/src/vec/vscat/impls/seq/seqvscat.c
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/petsc/src/vec/vscat/impls/sf/vscatsf.c
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/vscatfce.c
/petsc/src/vec/vscat/interface/vscreate.c
d49bb8f905-Nov-2018 Barry Smith <bsmith@mcs.anl.gov>

Add if (*ierr) return checks for all Fortran stubs that utilize FREECHAR()

Otherwise the ierr is overwritten by the FREECHAR() thus returning a zero error code when it should not

Commit-type: bug-f

Add if (*ierr) return checks for all Fortran stubs that utilize FREECHAR()

Otherwise the ierr is overwritten by the FREECHAR() thus returning a zero error code when it should not

Commit-type: bug-fix
Reported-by: Tim Steinhoff <kandanovian@gmail.com>

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/petsc/src/ts/impls/explicit/rk/ftn-custom/zrkf.c
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/petsc/src/ts/impls/rosw/ftn-custom/zroswf.c
/petsc/src/ts/impls/rosw/rosw.c
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/petsc/src/vec/vec/examples/tutorials/output/ex4f_1.out
/petsc/src/vec/vec/impls/mpi/mpicuda/mpicuda.cu
/petsc/src/vec/vec/impls/mpi/mpiviennacl/mpiviennacl.cxx
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/mpi/pvecimpl.h
/petsc/src/vec/vec/impls/nest/vecnest.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/ftn-custom/zvsectionf.c
/petsc/src/vec/vec/impls/seq/seqcuda/veccuda2.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/impls/shared/shvec.c
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/ftn-custom/zvecregf.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vecreg.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/projection.c
/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vscat/examples/ex5.c
/petsc/src/vec/vscat/examples/makefile
/petsc/src/vec/vscat/examples/output/ex5_1.out
/petsc/src/vec/vscat/impls/makefile
/petsc/src/vec/vscat/impls/vpscat.c
/petsc/src/vec/vscat/impls/vpscat.h
/petsc/src/vec/vscat/impls/vpscat_mpi1.c
/petsc/src/vec/vscat/impls/vpscat_mpi1.h
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/ftn-custom/makefile
/petsc/src/vec/vscat/interface/ftn-custom/zvscatfcef.c
/petsc/src/vec/vscat/interface/makefile
/petsc/src/vec/vscat/interface/vscatfce.c
/petsc/src/vec/vscat/interface/vscreate.c
95c0884e24-Jun-2018 Lisandro Dalcin <dalcinl@gmail.com>

Sys: Fix 'extern' declarations


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/petsc/src/vec/vscat/examples/ex2.c
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/petsc/src/vec/vscat/impls/makefile
/petsc/src/vec/vscat/impls/vpscat.c
/petsc/src/vec/vscat/impls/vpscat.h
/petsc/src/vec/vscat/impls/vpscat_mpi1.c
/petsc/src/vec/vscat/impls/vpscat_mpi1.h
/petsc/src/vec/vscat/impls/vscat.c
/petsc/src/vec/vscat/interface/dlregisvecscat.c
/petsc/src/vec/vscat/interface/makefile
/petsc/src/vec/vscat/interface/vscreate.c
/petsc/src/vec/vscat/makefile
/petsc/systems/Apple/OSX/bin/makedmg
/petsc/systems/Apple/OSX/examples/PETSc cocoa example/PETSc cocoa example.xcodeproj/project.pbxproj
/petsc/systems/Apple/OSX/examples/PETSc cocoa example/PETSc cocoa example/PETSc cocoa example-Info.plist
/petsc/systems/Apple/iOS/PETSc/PETSc.xcodeproj/project.pbxproj
/petsc/systems/Apple/iOS/bin/iosbuilder.py
/petsc/systems/Apple/iOS/bin/makedmg
b3d9c00017-Mar-2017 Satish Balay <balay@mcs.anl.gov>

Merge branch 'maint'


/petsc/.gitignore
/petsc/.travis.yml
/petsc/bin/FASTMathInstaller.py
/petsc/bin/maint/builddist
/petsc/bin/maint/buildtest
/petsc/bin/maint/convertExamples.py
/petsc/bin/maint/convertExamplesUtils.py
/petsc/bin/maint/createpatch
/petsc/bin/maint/examplesMkParse.py
/petsc/bin/maint/examplesWalker.py
/petsc/bin/maint/findvisibleprivatefunctions
/petsc/bin/maint/generateetags.py
/petsc/bin/maint/normalizeOutput.py
/petsc/bin/petsc_conf.py
/petsc/bin/petscdiff
/petsc/bin/win32fe/win32fe.exe
/petsc/bin/win32fe/win32feutils.dll
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/libraries.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/Chaco.py
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/petsc/config/BuildSystem/config/packages/alquimia.py
/petsc/config/BuildSystem/config/packages/boost.py
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/petsc/config/BuildSystem/config/packages/hdf5.py
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/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/options/arch.py
/petsc/config/PETSc/options/dataFilesPath.py
/petsc/config/PETSc/options/installDir.py
/petsc/config/PETSc/options/petscclone.py
/petsc/config/builder.py
/petsc/config/configure.py
/petsc/config/example_template.py
/petsc/config/examples/arch-aix64-dbg.py
/petsc/config/examples/arch-bgp-ibm-opt.py
/petsc/config/examples/arch-c-exodus-dbg-builder.py
/petsc/config/examples/arch-cray-xt5-opt.py
/petsc/config/examples/arch-cray-xt6-pkgs-opt.py
/petsc/config/examples/arch-freebsd-cxx-cmplx-pkgs-dbg.py
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/petsc/config/examples/arch-jenkins-linux-icc-ifort-icpc-c-yes-yes-real-yes-double.py
/petsc/config/examples/arch-linux-gcc-ifc-cmplx.py
/petsc/config/examples/arch-linux-matlab-ilp64-gcov.py
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/petsc/config/examples/arch-linux-pkgs-gcov.py
/petsc/config/examples/arch-linux-pkgs-opt-threadcomm.py
/petsc/config/examples/arch-linux-pkgs-opt.csh
/petsc/config/examples/arch-moab.py
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/petsc/src/vec/vec/utils/tagger/interface/dlregistagger.c
/petsc/src/vec/vec/utils/tagger/interface/makefile
/petsc/src/vec/vec/utils/tagger/interface/tagger.c
/petsc/src/vec/vec/utils/tagger/interface/taggerregi.c
/petsc/src/vec/vec/utils/tagger/makefile
/petsc/src/vec/vec/utils/vpscat.c
ef4e351914-Mar-2017 Patrick Sanan <patrick.sanan@gmail.com>

PetscInsertOptionsFileYAML: update man page

* add note to man that YAML files should be validated
* change level to intermediate


yamlimpls.c
a29ed55014-Mar-2017 Patrick Sanan <patrick.sanan@gmail.com>

YAML: produce error when YAML calls fail

Check for non-zero exit codes from a couple of libyaml calls.

This was noticed because of an infinite loop that results if you
use a YAML file with incorrec

YAML: produce error when YAML calls fail

Check for non-zero exit codes from a couple of libyaml calls.

This was noticed because of an infinite loop that results if you
use a YAML file with incorrect indentation, e.g.

ksp:
type: cg
monitor:

show more ...


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390e1bf225-Dec-2016 Barry Smith <bsmith@mcs.anl.gov>

Minor cleanup, remove some outdated code, remove unneeded constructs, improve manual pages slightly, add missing test case

Time: 2.5 hours


/petsc/bin/maint/toclapack.sh
/petsc/config/BuildSystem/config/compilerOptions.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
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/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
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ftn-custom/zyamlimplsf.c
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/petsc/src/ts/impls/python/ftn-custom/zpythontf.c
/petsc/src/ts/impls/rosw/ftn-custom/zroswf.c
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/petsc/src/vec/f90-mod/petscvec.h90
/petsc/src/vec/is/ao/interface/ftn-custom/zaof.c
/petsc/src/vec/is/is/utils/iscoloring.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/ftn-custom/zvsectionf.c
/petsc/src/vec/vec/interface/ftn-custom/zvecregf.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/utils/ftn-custom/zvscatf.c
/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/tutorials/python/makefile
fbfcfee519-Dec-2016 Barry Smith <bsmith@mcs.anl.gov>

Remove the use and definition of __FUNCT__ throughout the code

Since all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETSc
Time: 1.5 hours
Thanks-t

Remove the use and definition of __FUNCT__ throughout the code

Since all modern C/C++ compilers provide this functionality we no longer need to provide it manually in PETSc
Time: 1.5 hours
Thanks-to: Andreas Mang <andreas@ices.utexas.edu>

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/petsc/tutorials/python/ex1.c
/petsc/tutorials/python/ex1f.F
4683183f14-Nov-2016 Barry Smith <bsmith@mcs.anl.gov>

improve the manual pages seealso and add additional manual pages for PETSc web utilities

Time: 1 hour


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56a3116602-Oct-2016 Barry Smith <bsmith@mcs.anl.gov>

Added error checking for fread() call in YAML processing

Time: .1 hours
Reported-by: nightly tests


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/petsc/src/vec/vec/impls/seq/seqcusp/veccusp2.cu
/petsc/src/vec/vec/impls/seq/seqviennacl/makefile
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/petsc/src/vec/vec/impls/seq/seqviennacl/viennaclvecimpl.h
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/petsc/src/vec/vec/impls/seq/seqviennaclcuda/vecviennaclcuda.cu
/petsc/src/vec/vec/impls/seq/seqviennaclcuda/viennaclvecimpl.h
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vecregall.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/ftn-custom/zvscatf.c
/petsc/src/vec/vec/utils/makefile
/petsc/src/vec/vec/utils/matlab/gcreatev.c
/petsc/src/vec/vec/utils/matlab/makefile
/petsc/src/vec/vec/utils/projection.c
/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vpscat.h
/petsc/src/vec/vec/utils/vscat.c
/petsc/src/vec/vec/utils/vsection.c
/petsc/systems/Apple/OSX/bin/makeall
/petsc/systems/Apple/iOS/PETSc/PETSc.xcodeproj/project.pbxproj
/petsc/systems/Apple/iOS/bin/iosbuilder.py
/petsc/systems/Apple/iOS/bin/makeall
/petsc/systems/Apple/iOS/bin/makeframework
/petsc/tutorials/python/ex1.c
/petsc/tutorials/python/ex1.py
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/petsc/tutorials/python/output/ex1_1.out
/petsc/tutorials/python/output/ex1f_1.out
/petsc/tutorials/python/output/ex1py_1.out
d4a4bb9310-Nov-2015 Satish Balay <balay@mcs.anl.gov>

yaml: fix issues with PetscOptions change


/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/Chombo.py
/petsc/config/BuildSystem/config/packages/Trilinos.py
/petsc/config/BuildSystem/config/packages/elemental.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/packages/saws.py
/petsc/config/PETSc/Regression.py
/petsc/config/builder.py
/petsc/config/examples/arch-osx-10.6-cxx-cmplx-pkgs-dbg.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6.py
/petsc/config/install.py
/petsc/include/petsc/finclude/petscmat.h
/petsc/include/petsc/finclude/petsctao.h
/petsc/include/petsc/mpiuni/mpif.h
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsc/private/petscimpl.h
/petsc/include/petsc/private/taoimpl.h
/petsc/include/petscmat.h
/petsc/include/petscmath.h
/petsc/include/petscoptions.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/lib/petsc/conf/test
/petsc/src/benchmarks/streams/makefile
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/dt/interface/dtfv.c
/petsc/src/dm/examples/tests/ex21.c
/petsc/src/dm/examples/tutorials/ex13f90.F90
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/petsc/src/ts/examples/tutorials/power_grid/ex3opt.c
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/petsc/src/ts/examples/tutorials/power_grid/ex9opt.c
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/petsc/src/ts/examples/tutorials/power_grid/stability_9bus/ex9busopt.c
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/petsc/src/ts/interface/ts.c
/petsc/src/vec/pf/interface/pf.c
/petsc/src/vec/vec/impls/seq/seqviennacl/vecviennacl.cxx
/petsc/src/vec/vec/interface/vector.c
c5929fdf31-Oct-2015 Barry Smith <bsmith@mcs.anl.gov>

Complete update to new PetscOptions interface


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/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/veccreate.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/makefile
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/projection.c
/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vec/utils/vecstash.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vpscat.c
/petsc/src/vec/vec/utils/vpscat.h
/petsc/src/vec/vec/utils/vscat.c
/petsc/src/vec/vec/utils/vsection.c
/petsc/systems/Apple/OSX/bin/arch-osx-debug.py
/petsc/systems/Apple/OSX/bin/arch-osx-release.py
/petsc/systems/Apple/OSX/bin/makeframework
/petsc/systems/Apple/iOS/bin/arch-ios-simulator.py
/petsc/systems/Apple/iOS/bin/makeframework
/petsc/tutorials/HandsOnExercise.html
/petsc/tutorials/TAOHandsOnExercise.html
/petsc/tutorials/jbearing.jpg
/petsc/tutorials/minsurf.jpg
/petsc/tutorials/python/ex1.c
/petsc/tutorials/python/ex1f.F
/petsc/tutorials/rosenbrock.jpg
af0996ce11-Apr-2015 Barry Smith <bsmith@mcs.anl.gov>

updated PETSc directory layout to match standard packaging strategies

include/petsc finclude,private,mpiuni
lib/petsc conf
bin/petsc*


/petsc/.mailmap
/petsc/ConfigureFixes.tex
/petsc/bin/PetscBinaryIO.py
/petsc/bin/PetscBinaryIO_tests.py
/petsc/bin/configVars.py
/petsc/bin/maint/builddist
/petsc/bin/maint/buildtest
/petsc/bin/maint/checkBuilds.py
/petsc/bin/maint/confignightly/crank3
/petsc/bin/maint/generateetags.py
/petsc/bin/maint/generatefortranstubs.py
/petsc/bin/maint/generators/matlab.py
/petsc/bin/maint/submitPatch.py
/petsc/bin/maint/toclapack.sh
/petsc/bin/maint/wwwindex.py
/petsc/bin/maint/xclude
/petsc/bin/mpiexec.sshsync
/petsc/bin/petsc_conf.py
/petsc/bin/petsc_gen_xdmf.py
/petsc/bin/petsclogformat.py
/petsc/bin/petscmpiexec
/petsc/bin/petscnagupgrade.py
/petsc/bin/portabilitycheck.py
/petsc/config/BuildSystem/config/base.py
/petsc/config/BuildSystem/config/compilerFlags.py
/petsc/config/BuildSystem/config/compilerOptions.py
/petsc/config/BuildSystem/config/compilers.py
/petsc/config/BuildSystem/config/framework.py
/petsc/config/BuildSystem/config/functions.py
/petsc/config/BuildSystem/config/headers.py
/petsc/config/BuildSystem/config/libraries.py
/petsc/config/BuildSystem/config/package.py
/petsc/config/BuildSystem/config/packages/BlasLapack.py
/petsc/config/BuildSystem/config/packages/Chaco.py
/petsc/config/BuildSystem/config/packages/Chombo.py
/petsc/config/BuildSystem/config/packages/MOAB.py
/petsc/config/BuildSystem/config/packages/MPI.py
/petsc/config/BuildSystem/config/packages/MPICH.py
/petsc/config/BuildSystem/config/packages/MUMPS.py
/petsc/config/BuildSystem/config/packages/Matlab.py
/petsc/config/BuildSystem/config/packages/OpenMPI.py
/petsc/config/BuildSystem/config/packages/PARTY.py
/petsc/config/BuildSystem/config/packages/PTScotch.py
/petsc/config/BuildSystem/config/packages/PaStiX.py
/petsc/config/BuildSystem/config/packages/SuiteSparse.py
/petsc/config/BuildSystem/config/packages/SuperLU.py
/petsc/config/BuildSystem/config/packages/SuperLU_DIST.py
/petsc/config/BuildSystem/config/packages/SuperLU_MT.py
/petsc/config/BuildSystem/config/packages/Triangle.py
/petsc/config/BuildSystem/config/packages/Trilinos.py
/petsc/config/BuildSystem/config/packages/Zoltan.py
/petsc/config/BuildSystem/config/packages/afterimage.py
/petsc/config/BuildSystem/config/packages/boost.py
/petsc/config/BuildSystem/config/packages/c2html.py
/petsc/config/BuildSystem/config/packages/cmake.py
/petsc/config/BuildSystem/config/packages/ctetgen.py
/petsc/config/BuildSystem/config/packages/cuda.py
/petsc/config/BuildSystem/config/packages/cusp.py
/petsc/config/BuildSystem/config/packages/elemental.py
/petsc/config/BuildSystem/config/packages/exodusii.py
/petsc/config/BuildSystem/config/packages/f2cblaslapack.py
/petsc/config/BuildSystem/config/packages/fblaslapack.py
/petsc/config/BuildSystem/config/packages/fiat.py
/petsc/config/BuildSystem/config/packages/glut.py
/petsc/config/BuildSystem/config/packages/hwloc.py
/petsc/config/BuildSystem/config/packages/hypre.py
/petsc/config/BuildSystem/config/packages/lgrind.py
/petsc/config/BuildSystem/config/packages/make.py
/petsc/config/BuildSystem/config/packages/metis.py
/petsc/config/BuildSystem/config/packages/mkl_cpardiso.py
/petsc/config/BuildSystem/config/packages/mkl_pardiso.py
/petsc/config/BuildSystem/config/packages/ml.py
/petsc/config/BuildSystem/config/packages/mpe.py
/petsc/config/BuildSystem/config/packages/mpi4py.py
/petsc/config/BuildSystem/config/packages/netcdf.py
/petsc/config/BuildSystem/config/packages/opencl.py
/petsc/config/BuildSystem/config/packages/opengl.py
/petsc/config/BuildSystem/config/packages/opengles.py
/petsc/config/BuildSystem/config/packages/openmp.py
/petsc/config/BuildSystem/config/packages/openmpclasses.py
/petsc/config/BuildSystem/config/packages/pARMS.py
/petsc/config/BuildSystem/config/packages/parmetis.py
/petsc/config/BuildSystem/config/packages/petsc4py.py
/petsc/config/BuildSystem/config/packages/pthread.py
/petsc/config/BuildSystem/config/packages/pthreadclasses.py
/petsc/config/BuildSystem/config/packages/scalapack.py
/petsc/config/BuildSystem/config/packages/scientificpython.py
/petsc/config/BuildSystem/config/packages/sowing.py
/petsc/config/BuildSystem/config/packages/spai.py
/petsc/config/BuildSystem/config/packages/sprng.py
/petsc/config/BuildSystem/config/packages/ssl.py
/petsc/config/BuildSystem/config/packages/sundials.py
/petsc/config/BuildSystem/config/packages/tchem.py
/petsc/config/BuildSystem/config/packages/tetgen.py
/petsc/config/BuildSystem/config/packages/valgrind.py
/petsc/config/BuildSystem/config/packages/viennacl.py
/petsc/config/BuildSystem/config/programs.py
/petsc/config/BuildSystem/config/python.py
/petsc/config/BuildSystem/config/setCompilers.py
/petsc/config/BuildSystem/config/sourceControl.py
/petsc/config/BuildSystem/config/types.py
/petsc/config/BuildSystem/config/utilities/cacheDetails.py
/petsc/config/BuildSystem/config/utilities/debuggers.py
/petsc/config/BuildSystem/config/utilities/getResidentSetSize.py
/petsc/config/BuildSystem/logger.py
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/options/indexTypes.py
/petsc/config/PETSc/options/installDir.py
/petsc/config/PETSc/options/libraryOptions.py
/petsc/config/PETSc/options/petscclone.py
/petsc/config/PETSc/options/scalarTypes.py
/petsc/config/PETSc/packages/tchem.py
/petsc/config/PETSc/petsc.py
/petsc/config/builder.py
/petsc/config/builder2.py
/petsc/config/cmakeboot.py
/petsc/config/cmakegen.py
/petsc/config/configure.py
/petsc/config/examples/arch-freebsd-cxx-pkgs-opt.py
/petsc/config/examples/arch-freebsd-pkgs-opt.py
/petsc/config/examples/arch-linux-gcc-real-env.py
/petsc/config/examples/arch-linux-pkgs-cxx-mlib.py
/petsc/config/examples/arch-linux-pkgs-opt.py
/petsc/config/examples/arch-osx-10.6-cxx-env.py
/petsc/config/examples/arch-osx-10.6-cxx-pkgs-opt.py
/petsc/config/gmakegen.py
/petsc/config/install.py
/petsc/gmakefile
/petsc/include/makefile
/petsc/include/petsc.h
/petsc/include/petsc/finclude/ftn-custom/makefile
/petsc/include/petsc/finclude/ftn-custom/petscdm.h90
/petsc/include/petsc/finclude/ftn-custom/petscdmcomposite.h90
/petsc/include/petsc/finclude/ftn-custom/petscdmda.h90
/petsc/include/petsc/finclude/ftn-custom/petscdmdef.h90
/petsc/include/petsc/finclude/ftn-custom/petscdmhide.h90
/petsc/include/petsc/finclude/ftn-custom/petscdmplex.h90
/petsc/include/petsc/finclude/ftn-custom/petscdmplexdef.h90
/petsc/include/petsc/finclude/ftn-custom/petscdmredundant.h90
/petsc/include/petsc/finclude/ftn-custom/petscdmshell.h90
/petsc/include/petsc/finclude/ftn-custom/petscdt.h90
/petsc/include/petsc/finclude/ftn-custom/petscdtdef.h90
/petsc/include/petsc/finclude/ftn-custom/petscdthide.h90
/petsc/include/petsc/finclude/ftn-custom/petscis.h90
/petsc/include/petsc/finclude/ftn-custom/petscisdef.h90
/petsc/include/petsc/finclude/ftn-custom/petscishide.h90
/petsc/include/petsc/finclude/ftn-custom/petscksp.h90
/petsc/include/petsc/finclude/ftn-custom/petsckspdef.h90
/petsc/include/petsc/finclude/ftn-custom/petscksphide.h90
/petsc/include/petsc/finclude/ftn-custom/petscmat.h90
/petsc/include/petsc/finclude/ftn-custom/petscmatdef.h90
/petsc/include/petsc/finclude/ftn-custom/petscmathide.h90
/petsc/include/petsc/finclude/ftn-custom/petscpc.h90
/petsc/include/petsc/finclude/ftn-custom/petscpcdef.h90
/petsc/include/petsc/finclude/ftn-custom/petscpchide.h90
/petsc/include/petsc/finclude/ftn-custom/petscsnes.h90
/petsc/include/petsc/finclude/ftn-custom/petscsnesdef.h90
/petsc/include/petsc/finclude/ftn-custom/petscsneshide.h90
/petsc/include/petsc/finclude/ftn-custom/petscts.h90
/petsc/include/petsc/finclude/ftn-custom/petsctsdef.h90
/petsc/include/petsc/finclude/ftn-custom/petsctshide.h90
/petsc/include/petsc/finclude/ftn-custom/petscvec.h90
/petsc/include/petsc/finclude/ftn-custom/petscvecdef.h90
/petsc/include/petsc/finclude/ftn-custom/petscvechide.h90
/petsc/include/petsc/finclude/ftn-custom/petscviewer.h90
/petsc/include/petsc/finclude/ftn-custom/petscviewerdef.h90
/petsc/include/petsc/finclude/ftn-custom/petscviewerhide.h90
/petsc/include/petsc/finclude/makefile
/petsc/include/petsc/finclude/petsc.h
/petsc/include/petsc/finclude/petsc.h90
/petsc/include/petsc/finclude/petscao.h
/petsc/include/petsc/finclude/petscaodef.h
/petsc/include/petsc/finclude/petscbag.h
/petsc/include/petsc/finclude/petscbagdef.h
/petsc/include/petsc/finclude/petscdef.h
/petsc/include/petsc/finclude/petscdm.h
/petsc/include/petsc/finclude/petscdm.h90
/petsc/include/petsc/finclude/petscdmcomposite.h90
/petsc/include/petsc/finclude/petscdmda.h
/petsc/include/petsc/finclude/petscdmda.h90
/petsc/include/petsc/finclude/petscdmdadef.h
/petsc/include/petsc/finclude/petscdmdef.h
/petsc/include/petsc/finclude/petscdmplex.h
/petsc/include/petsc/finclude/petscdmplex.h90
/petsc/include/petsc/finclude/petscdmplexdef.h
/petsc/include/petsc/finclude/petscdmredundant.h90
/petsc/include/petsc/finclude/petscdmshell.h90
/petsc/include/petsc/finclude/petscdraw.h
/petsc/include/petsc/finclude/petscdrawdef.h
/petsc/include/petsc/finclude/petscdt.h90
/petsc/include/petsc/finclude/petscerror.h
/petsc/include/petsc/finclude/petscerrordef.h
/petsc/include/petsc/finclude/petscis.h
/petsc/include/petsc/finclude/petscis.h90
/petsc/include/petsc/finclude/petscisdef.h
/petsc/include/petsc/finclude/petscksp.h
/petsc/include/petsc/finclude/petscksp.h90
/petsc/include/petsc/finclude/petsckspdef.h
/petsc/include/petsc/finclude/petsclog.h
/petsc/include/petsc/finclude/petsclogdef.h
/petsc/include/petsc/finclude/petscmat.h
/petsc/include/petsc/finclude/petscmat.h90
/petsc/include/petsc/finclude/petscmatdef.h
/petsc/include/petsc/finclude/petscmatfactorinfosize.h
/petsc/include/petsc/finclude/petscmatinfosize.h
/petsc/include/petsc/finclude/petscpc.h
/petsc/include/petsc/finclude/petscpc.h90
/petsc/include/petsc/finclude/petscpcdef.h
/petsc/include/petsc/finclude/petscsnes.h
/petsc/include/petsc/finclude/petscsnes.h90
/petsc/include/petsc/finclude/petscsnesdef.h
/petsc/include/petsc/finclude/petscsnesfas.h
/petsc/include/petsc/finclude/petscsnesfasdef.h
/petsc/include/petsc/finclude/petscsys.h
/petsc/include/petsc/finclude/petscsysdef.h
/petsc/include/petsc/finclude/petsctao.h
/petsc/include/petsc/finclude/petsctaodef.h
/petsc/include/petsc/finclude/petscts.h
/petsc/include/petsc/finclude/petscts.h90
/petsc/include/petsc/finclude/petsctsdef.h
/petsc/include/petsc/finclude/petscvec.h
/petsc/include/petsc/finclude/petscvec.h90
/petsc/include/petsc/finclude/petscvecdef.h
/petsc/include/petsc/finclude/petscviewer.h
/petsc/include/petsc/finclude/petscviewer.h90
/petsc/include/petsc/finclude/petscviewerdef.h
/petsc/include/petsc/mpiuni/mpi.h
/petsc/include/petsc/mpiuni/mpif.h
/petsc/include/petsc/private/bagimpl.h
/petsc/include/petsc/private/characteristicimpl.h
/petsc/include/petsc/private/dmdaimpl.h
/petsc/include/petsc/private/dmimpl.h
/petsc/include/petsc/private/dmmbimpl.h
/petsc/include/petsc/private/dmnetworkimpl.h
/petsc/include/petsc/private/dmpatchimpl.h
/petsc/include/petsc/private/dmpleximpl.h
/petsc/include/petsc/private/drawimpl.h
/petsc/include/petsc/private/dtimpl.h
/petsc/include/petsc/private/fortranimpl.h
/petsc/include/petsc/private/isimpl.h
/petsc/include/petsc/private/kernels/blockinvert.h
/petsc/include/petsc/private/kernels/blockmatmult.h
/petsc/include/petsc/private/kernels/blocktranspose.h
/petsc/include/petsc/private/kernels/petscaxpy.h
/petsc/include/petsc/private/kspimpl.h
/petsc/include/petsc/private/linesearchimpl.h
/petsc/include/petsc/private/logimpl.h
/petsc/include/petsc/private/makefile
/petsc/include/petsc/private/matimpl.h
/petsc/include/petsc/private/matorderimpl.h
/petsc/include/petsc/private/pcgamgimpl.h
/petsc/include/petsc/private/pcimpl.h
/petsc/include/petsc/private/pcmgimpl.h
/petsc/include/petsc/private/petscdsimpl.h
/petsc/include/petsc/private/petscfeimpl.h
/petsc/include/petsc/private/petscfptimpl.h
/petsc/include/petsc/private/petscfvimpl.h
/petsc/include/petsc/private/petscimpl.h
/petsc/include/petsc/private/sfimpl.h
/petsc/include/petsc/private/snesimpl.h
/petsc/include/petsc/private/taoimpl.h
/petsc/include/petsc/private/taolinesearchimpl.h
/petsc/include/petsc/private/threadcommimpl.h
/petsc/include/petsc/private/tsimpl.h
/petsc/include/petsc/private/vecimpl.h
/petsc/include/petsc/private/viewerimpl.h
/petsc/include/petscao.h
/petsc/include/petscbag.h
/petsc/include/petscbt.h
/petsc/include/petsccharacteristic.h
/petsc/include/petscctable.h
/petsc/include/petscdm.h
/petsc/include/petscdmda.h
/petsc/include/petscdmplex.h
/petsc/include/petscdmredundant.h
/petsc/include/petscdmshell.h
/petsc/include/petscdmtypes.h
/petsc/include/petscdraw.h
/petsc/include/petscdrawtypes.h
/petsc/include/petscds.h
/petsc/include/petscdt.h
/petsc/include/petscerror.h
/petsc/include/petscfe.h
/petsc/include/petscfv.h
/petsc/include/petscis.h
/petsc/include/petscksp.h
/petsc/include/petsclog.h
/petsc/include/petscmat.h
/petsc/include/petscmatelemental.h
/petsc/include/petscmath.h
/petsc/include/petscoptions.h
/petsc/include/petscpc.h
/petsc/include/petscpf.h
/petsc/include/petscsf.h
/petsc/include/petscsnes.h
/petsc/include/petscsys.h
/petsc/include/petsctao.h
/petsc/include/petscts.h
/petsc/include/petscvec.h
/petsc/include/petscversion.h
/petsc/include/petscviewer.h
/petsc/include/petscviewerhdf5.h
/petsc/interfaces/lua/makefile
/petsc/interfaces/lua/src/makefile
/petsc/interfaces/makefile
/petsc/lib/petsc/conf/adic.init
/petsc/lib/petsc/conf/adicmastercontrol
/petsc/lib/petsc/conf/adicmf.init
/petsc/lib/petsc/conf/adicmfb.init
/petsc/lib/petsc/conf/bfort-base.txt
/petsc/lib/petsc/conf/bfort-mpi.txt
/petsc/lib/petsc/conf/bfort-petsc.txt
/petsc/lib/petsc/conf/rules
/petsc/lib/petsc/conf/test
/petsc/lib/petsc/conf/variables
/petsc/makefile
/petsc/setup.py
/petsc/share/petsc/datafiles/meshes/Rect-tri3.exo
/petsc/share/petsc/datafiles/meshes/square.cas
/petsc/share/petsc/matlab/PetscBagRead.m
/petsc/share/petsc/saws/documentation
/petsc/share/petsc/saws/images/arrow.png
/petsc/share/petsc/saws/images/transition.bmp
/petsc/share/petsc/saws/js/PETSc.js
/petsc/share/petsc/saws/js/boxTree.js
/petsc/share/petsc/saws/js/defaults.js
/petsc/share/petsc/saws/js/drawDiagrams.js
/petsc/share/petsc/saws/js/events.js
/petsc/share/petsc/saws/js/getCmdOptions.js
/petsc/share/petsc/saws/js/listLogic.js
/petsc/share/petsc/saws/js/main.js
/petsc/share/petsc/saws/js/matrixTex.js
/petsc/share/petsc/saws/js/parsePrefix.js
/petsc/share/petsc/saws/js/populateLists.js
/petsc/share/petsc/saws/js/recordSawsData.js
/petsc/share/petsc/saws/js/tree.js
/petsc/share/petsc/saws/js/treeInterface.js
/petsc/share/petsc/saws/js/utils.js
/petsc/share/petsc/saws/linearsolveroptions.html
/petsc/share/petsc/saws/readme
/petsc/src/benchmarks/makefile
/petsc/src/benchmarks/streams/makefile
/petsc/src/contrib/fun3d/comp/flow.c
/petsc/src/contrib/fun3d/comp/makefile
/petsc/src/contrib/fun3d/comp/user.F
/petsc/src/contrib/fun3d/comp/user.h
/petsc/src/contrib/fun3d/comp/userJac.F
/petsc/src/contrib/fun3d/incomp/makefile
/petsc/src/contrib/fun3d/incomp/user.F
/petsc/src/contrib/fun3d/incomp/user.h
/petsc/src/contrib/fun3d/incomp/userJac.F
/petsc/src/contrib/fun3d/makefile
/petsc/src/contrib/makefile
/petsc/src/contrib/style/include-graph.sh
/petsc/src/dm/dt/examples/makefile
/petsc/src/dm/dt/examples/tests/makefile
/petsc/src/dm/dt/interface/dt.c
/petsc/src/dm/dt/interface/dtds.c
/petsc/src/dm/dt/interface/dtfe.c
/petsc/src/dm/dt/interface/dtfv.c
/petsc/src/dm/dt/interface/f90-custom/makefile
/petsc/src/dm/dt/interface/f90-custom/zdtdsf90.c
/petsc/src/dm/dt/interface/f90-custom/zdtf90.c
/petsc/src/dm/dt/interface/ftn-custom/makefile
/petsc/src/dm/dt/interface/ftn-custom/zdtf.c
/petsc/src/dm/dt/interface/makefile
/petsc/src/dm/dt/makefile
/petsc/src/dm/examples/makefile
/petsc/src/dm/examples/tests/ex11.c
/petsc/src/dm/examples/tests/ex19.c
/petsc/src/dm/examples/tests/ex21.c
/petsc/src/dm/examples/tests/ex36.c
/petsc/src/dm/examples/tests/makefile
/petsc/src/dm/examples/tests/output/ex7_1.out
/petsc/src/dm/examples/tutorials/ex10.c
/petsc/src/dm/examples/tutorials/ex11f90.F
/petsc/src/dm/examples/tutorials/ex13f90.F90
/petsc/src/dm/examples/tutorials/ex13f90aux.F90
/petsc/src/dm/examples/tutorials/ex15.c
/petsc/src/dm/examples/tutorials/ex3.c
/petsc/src/dm/examples/tutorials/ex65dm.c
/petsc/src/dm/examples/tutorials/makefile
/petsc/src/dm/examples/tutorials/output/ex13f90.out
/petsc/src/dm/examples/tutorials/output/ex15_1.out
/petsc/src/dm/examples/tutorials/output/ex15_2.out
/petsc/src/dm/examples/tutorials/output/ex15_3.out
/petsc/src/dm/f90-mod/makefile
/petsc/src/dm/f90-mod/petscdmmod.F
/petsc/src/dm/impls/composite/f90-custom/makefile
/petsc/src/dm/impls/composite/ftn-custom/makefile
/petsc/src/dm/impls/composite/ftn-custom/zfddaf.c
/petsc/src/dm/impls/composite/makefile
/petsc/src/dm/impls/composite/pack.c
/petsc/src/dm/impls/composite/packimpl.h
/petsc/src/dm/impls/da/da.c
/petsc/src/dm/impls/da/da1.c
/petsc/src/dm/impls/da/da2.c
/petsc/src/dm/impls/da/da3.c
/petsc/src/dm/impls/da/dacorn.c
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fe998a8013-Jan-2015 Barry Smith <bsmith@mcs.anl.gov>

manual merge of conflict


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/petsc/src/vec/vec/interface/rvector.c
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854ce69b15-Nov-2014 Barry Smith <bsmith@mcs.anl.gov>

convert some PetscMalloc() to PetscMalloc1()
remove unneeded () in first argument to PetscMalloc/Calloc1()
fixes for MATLAB examples


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785e854f03-Dec-2013 Jed Brown <jedbrown@mcs.anl.gov>

Sys: add PetscMalloc1 macro, array allocation without redundant types

The type is inferred from the pointer return type. This patch is
automated via the following script:

git grep -l 'PetscMalloc(

Sys: add PetscMalloc1 macro, array allocation without redundant types

The type is inferred from the pointer return type. This patch is
automated via the following script:

git grep -l 'PetscMalloc(.*sizeof' src | xargs perl -pi -e 's@PetscMalloc\(([^,;]*[^,; ]) *\* *sizeof\([^,;()]+\),@PetscMalloc1($1,@'

This commit contains an additional bug-fix in csrperm.c, fixing pointer
arity. The code was introduced in 2006, but the allocation could not
have been correct at any time. This probably means that
MatDuplicate_SeqAIJPERM has never been tested.

a54129beb540034ba105796c682d589e7e1111f2
Richard Tran Mills <rmills@ornl.gov>

Added MATSEQCSRPERM support for MatDuplicate() and conversion to/from
MATSEQAIJ. Note that these changes are not quite debugged.

show more ...


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a264d7a610-Sep-2013 Barry Smith <bsmith@mcs.anl.gov>

fix name for PetscOptionsFList() and get FList() and EList() working properly with SAWs legal values


/petsc/.gitignore
/petsc/.mailmap
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/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vinv.c
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/petsc/systems/Apple/OSX/bin/makedmg
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/petsc/systems/Apple/OSX/examples/PETSc command line example/PETSc command line example/main.c
/petsc/tutorials/HandsOnExercise.html
9beb3f0221-Mar-2013 Jed Brown <jed@59A2.org>

yaml: remove trailing whitespace and avoid PETSC_OPTIONS in examples

These examples call PetscOptionsView(), which shows everything, so we
need a consistent environment. Always use -malloc_test in t

yaml: remove trailing whitespace and avoid PETSC_OPTIONS in examples

These examples call PetscOptionsView(), which shows everything, so we
need a consistent environment. Always use -malloc_test in this
environment to check for memory leaks in the yaml code.

show more ...


/petsc/src/sys/examples/tutorials/ex10f90.F90
/petsc/src/sys/examples/tutorials/makefile
/petsc/src/sys/examples/tutorials/output/ex10f90_1.out
/petsc/src/sys/examples/tutorials/output/ex10f90_2.out
/petsc/src/sys/examples/tutorials/output/ex9_1.out
/petsc/src/sys/examples/tutorials/output/ex9_2.out
/petsc/src/sys/examples/tutorials/petsc.yml
/petsc/src/sys/objects/options.c
ftn-custom/zyamlimplsf.c
25873f0f19-Mar-2013 Jed Brown <jed@59A2.org>

yaml: minor fixes: memory leak, match MPI types, update output/ex9_1.out


/petsc/src/sys/examples/tutorials/output/ex9_1.out
ftn-custom/makefile
makefile
yamlimpls.c
2ee5eb1519-Mar-2013 Blaise Bourdin <bourdin@lsu.edu>

PetscOptions: Replaced the ugly if {} else if {} else if {} with a fancy switch statement in yamlimpl.c


/petsc/src/sys/examples/tutorials/ex10f90.F90
/petsc/src/sys/examples/tutorials/ex9.c
/petsc/src/sys/examples/tutorials/makefile
/petsc/src/sys/examples/tutorials/output/ex10f90_1.out
/petsc/src/sys/examples/tutorials/output/ex10f90_2.out
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/petsc/src/sys/examples/tutorials/output/ex9_2.out
/petsc/src/sys/examples/tutorials/petsc.yml
yamlimpls.c
fb8867f615-Mar-2013 Blaise Bourdin <bourdin@lsu.edu>

PetscOptions: style compliance


ftn-custom/zyamlimplsf.c
yamlimpls.c
826011d713-Mar-2013 Blaise Bourdin <bourdin@lsu.edu>

PetscOptions: Add basic support for YAML-formatted options files

Basic support for YAML options files. This minimalistic parser does not
support advanced features (sequences, bookmarks), so it is re

PetscOptions: Add basic support for YAML-formatted options files

Basic support for YAML options files. This minimalistic parser does not
support advanced features (sequences, bookmarks), so it is really
a JSON parser.

Will try to add support for -options_file_type <TXT,YAML> flag in case
one want to add more options file formats in the future.

show more ...


/petsc/.hgignore
/petsc/bin/maint/buildtest
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/petsc/src/vec/is/is/utils/ftn-custom/ziscoloringf.c
/petsc/src/vec/is/is/utils/ftn-custom/zisltogf.c
/petsc/src/vec/is/is/utils/isblock.c
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/petsc/src/vec/pf/impls/string/cstring.c
/petsc/src/vec/pf/interface/pfall.c
/petsc/src/vec/pf/pfimpl.h
/petsc/src/vec/vec/examples/tests/ex31.c
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/petsc/src/vec/vec/examples/tutorials/ex10.c
/petsc/src/vec/vec/examples/tutorials/ex7.c
/petsc/src/vec/vec/impls/dvecimpl.h
/petsc/src/vec/vec/impls/hypre/vhyp.c
/petsc/src/vec/vec/impls/mpi/commonmpvec.c
/petsc/src/vec/vec/impls/mpi/ftn-custom/zpbvecf.c
/petsc/src/vec/vec/impls/mpi/mpicusp/mpicusp.cu
/petsc/src/vec/vec/impls/mpi/pbvec.c
/petsc/src/vec/vec/impls/mpi/pdvec.c
/petsc/src/vec/vec/impls/mpi/pvec2.c
/petsc/src/vec/vec/impls/mpi/pvecimpl.h
/petsc/src/vec/vec/impls/nest/ftn-custom/zvecnestf.c
/petsc/src/vec/vec/impls/nest/vecnest.c
/petsc/src/vec/vec/impls/seq/bvec2.c
/petsc/src/vec/vec/impls/seq/bvec3.c
/petsc/src/vec/vec/impls/seq/dvec2.c
/petsc/src/vec/vec/impls/seq/f90-custom/zvsectionf90.c
/petsc/src/vec/vec/impls/seq/ftn-custom/zbvec2f.c
/petsc/src/vec/vec/impls/seq/ftn-custom/zvsectionf.c
/petsc/src/vec/vec/impls/seq/ftn-kernels/faypx.h
/petsc/src/vec/vec/impls/seq/ftn-kernels/fmdot.h
/petsc/src/vec/vec/impls/seq/ftn-kernels/fnorm.h
/petsc/src/vec/vec/impls/seq/ftn-kernels/fwaxpy.h
/petsc/src/vec/vec/impls/seq/ftn-kernels/fxtimesy.h
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/impls/shared/shvec.c
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/f90-custom/zvectorf90.c
/petsc/src/vec/vec/interface/ftn-custom/zvecregf.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/vecregall.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/cmesh.c
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/ftn-custom/zvscatf.c
/petsc/src/vec/vec/utils/matlab/gcreatev.c
/petsc/src/vec/vec/utils/vecio.c
573b0fb414-Feb-2013 Barry Smith <bsmith@mcs.anl.gov>

eliminated includes of system string files from petscsys.h
slightly painful because of Jed's ugly PetscCheck__FUNCT__()

Hg-commit: c40acb6935dfc9df65da08a52a5f0cb47823cf1b


/petsc/.gitignore
/petsc/.hgignore
/petsc/bin/maint/buildtest
/petsc/conf/adic.init
/petsc/conf/adicmf.init
/petsc/conf/adicmfb.init
/petsc/conf/test
/petsc/config/PETSc/Configure.py
/petsc/config/PETSc/packages/PTScotch.py
/petsc/config/PETSc/packages/cuda.py
/petsc/config/PETSc/packages/txpetscgpu.py
/petsc/config/builder.py
/petsc/config/builder2.py
/petsc/config/examples/arch-cuda5-cg-opt.py
/petsc/include/finclude/makefile
/petsc/include/finclude/petsc.h
/petsc/include/finclude/petscpc.h
/petsc/include/finclude/petscpcdef.h
/petsc/include/finclude/petscsys.h
/petsc/include/finclude/petscviewer.h
/petsc/include/petsc-private/characteristicimpl.h
/petsc/include/petsc-private/daimpl.h
/petsc/include/petsc-private/dmimpl.h
/petsc/include/petsc-private/drawimpl.h
/petsc/include/petsc-private/fortranimpl.h
/petsc/include/petsc-private/isimpl.h
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/petsc/include/petsc-private/linesearchimpl.h
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/petsc/include/petsc-private/matimpl.h
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/petsc/include/petsc-private/petscaxpy.h
/petsc/include/petsc-private/petscfptimpl.h
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/petsc/include/petsc-private/sfimpl.h
/petsc/include/petsc-private/snesimpl.h
/petsc/include/petsc-private/threadcommimpl.h
/petsc/include/petsc-private/tsimpl.h
/petsc/include/petsc-private/vecimpl.h
/petsc/include/petsc-private/viewerimpl.h
/petsc/include/petsc.h
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/petsc/include/petscviewer.h
/petsc/include/sieve/CartesianSieve.hh
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/petsc/include/sieve/DMBuilder.hh
/petsc/include/sieve/FEMProblem.hh
/petsc/include/sieve/ISieve.hh
/petsc/include/sieve/Mesh.hh
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/petsc/include/sieve/Overlap.hh
/petsc/include/sieve/Partitioner.hh
/petsc/include/sieve/UFC.hh
/petsc/include/sieve/UFCProblem.hh
/petsc/src/benchmarks/PLogEvent.c
/petsc/src/benchmarks/PetscMalloc.c
/petsc/src/benchmarks/PetscVecNorm.c
/petsc/src/benchmarks/sizeof.c
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/petsc/src/benchmarks/streams/PthreadVersion.c
/petsc/src/benchmarks/streams/SSEVersion.c
/petsc/src/contrib/fun3d/comp/flow.c
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/petsc/src/vec/vec/impls/seq/makefile
/petsc/src/vec/vec/impls/seq/seqcusp/cuspvecimpl.h
/petsc/src/vec/vec/impls/seq/seqcusp/veccusp.cu
/petsc/src/vec/vec/impls/seq/vseqcr.c
/petsc/src/vec/vec/impls/shared/shvec.c
/petsc/src/vec/vec/interface/dlregisvec.c
/petsc/src/vec/vec/interface/ftn-custom/zvectorf.c
/petsc/src/vec/vec/interface/rvector.c
/petsc/src/vec/vec/interface/veccreate.c
/petsc/src/vec/vec/interface/vecreg.c
/petsc/src/vec/vec/interface/vecregall.c
/petsc/src/vec/vec/interface/vector.c
/petsc/src/vec/vec/utils/cmesh.c
/petsc/src/vec/vec/utils/comb.c
/petsc/src/vec/vec/utils/makefile
/petsc/src/vec/vec/utils/vecio.c
/petsc/src/vec/vec/utils/vecmpitoseq.c
/petsc/src/vec/vec/utils/vecs.c
/petsc/src/vec/vec/utils/vecstash.c
/petsc/src/vec/vec/utils/vinv.c
/petsc/src/vec/vec/utils/vpscat.c
/petsc/src/vec/vec/utils/vpscat.h
/petsc/src/vec/vec/utils/vscat.c
/petsc/src/vec/vec/utils/vsection.c
/petsc/tutorials/python/ex1.c

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