One-liners from petsc/petsc!5344 and petsc/petsc!5557Slightly reworked regular expressiongit ls-files -z -- '*.c' '*.cxx' '*.cu' '*.h' '*.hpp' '*.cpp' | while IFS= read -r -d '' file; do cat
One-liners from petsc/petsc!5344 and petsc/petsc!5557Slightly reworked regular expressiongit ls-files -z -- '*.c' '*.cxx' '*.cu' '*.h' '*.hpp' '*.cpp' | while IFS= read -r -d '' file; do cat $file | tr '\n' '\r' | sed -E 's/\r([ ]*)(for|if|while|else) ([^\r]*)\{\r[ ]*Petsc([a-zA-Z]*)\(([^\r]*)\);\r[ ]*\}\r/\r\1\2 \3Petsc\4(\5);\r/g' | tr '\r' '\n' > ${file}.joe; mv ${file}.joe ${file}done
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Add to CI compilers flags '-Wconversion', '-Wno-sign-conversion', '-Wno-float-conversion', '-Wno-implicit-float-conversion']Also fix the code to repository to compile cleanly with these flags in th
Add to CI compilers flags '-Wconversion', '-Wno-sign-conversion', '-Wno-float-conversion', '-Wno-implicit-float-conversion']Also fix the code to repository to compile cleanly with these flags in the CI
SF: need to sync the stream before MPI send even when there is nothing to send but has something to receiveThere might be pending gpu operations on the receive buffer. Without synchronization, say
SF: need to sync the stream before MPI send even when there is nothing to send but has something to receiveThere might be pending gpu operations on the receive buffer. Without synchronization, say we proceed to MPI_Waitall(). MPI might stage on host and do a H2D copy on an internal stream on the receive side. Previous gpu operations COULD happen after the H2D copy, causing a write-after-write reorder violation!
LIBBASE is no longer used in make so remove it
Merge branch 'barry/2023-10-25/rename-rules-doc' into 'main'Rename rules.doc and rules.utils because GitLab treats the former as a MS Word document.See merge request petsc/petsc!6965
PetscSF: add MPI-4.0 persistent neighborhood collectives support
PetscSF: refactor and modulize the code to better support persistent communication
Rename rules.doc and rules.utils because GitLab treats the former as a MS Word document.Thanks-to: Jed Brown
Convert all header guards to pragma once
non-test and tutorial makefiles only need rules.doc not the full rulesCommit-type: documentation
Only makefiles in the test and tutorial directories need lib/petsc/conf/testCommit-type: housekeeping
Remove now unneeded SOURCE* variables from makefilesCommit-type: configure, housekeeping
Remove empty preprocessor variables
Remove unneeded declarations of LOCDIR from all the makefilesCommit-type:documentation
Make PetscErrorCode a non-discardable enum
PetscSF: optimize SFALLGATHERV for the one-to-all patternthis happens with ML models using data parallelism having replicated local parametersAdd test
source code format changes due to .clang-format changes
Transform all header-guards into ifndefs to make clang-format ignore them for preprocessor indentation
Remove parent, parentid, flops, time, mem, and memchildren. Deprecate PetscLogObjectParent(), PetscLogObjectMemory(), and PetscNewLog()
makefile: fix typo - petsckdir.mk -> petscdir.mk
clang-format: convert PETSc sources to comply with clang-format
Add -include */petscdir.mk to makefile that lacked itfor i in `git ls-files | grep makefile | xargs grep -L petscdir.mk`; do echo $i ; str=`echo $i |sed -e 's?[-a-zA-Z0-9]*/?../?g' -e 's?makef
Add -include */petscdir.mk to makefile that lacked itfor i in `git ls-files | grep makefile | xargs grep -L petscdir.mk`; do echo $i ; str=`echo $i |sed -e 's?[-a-zA-Z0-9]*/?../?g' -e 's?makefile?petsckdir.mk?g'` ; cp $i tmp echo "-include $str" > $i cat tmp >> $idoneCommit-type: makefile, housekeeping/spend 15m
remove garbage from makefilesIncluding * unused FLAGS variables * All: lib that did not work * stray blank lines etcCommit-type: housekeeping/spend 1h
The great renaming:- CHKERRQ() -> PetscCall()- CHKERRV() -> PetscCallVoid()- CHKERRMPI() -> PetscCallMPI()- CHKERRABORT() -> PetscCallAbort()- CHKERRCONTINUE() -> PetscCallContinue()- CHKERRXX
The great renaming:- CHKERRQ() -> PetscCall()- CHKERRV() -> PetscCallVoid()- CHKERRMPI() -> PetscCallMPI()- CHKERRABORT() -> PetscCallAbort()- CHKERRCONTINUE() -> PetscCallContinue()- CHKERRXX() -> PetscCallThrow()- CHKERRCXX() -> PetscCallCXX()- CHKERRCUDA() -> PetscCallCUDA()- CHKERRCUBLAS() -> PetscCallCUBLAS()- CHKERRCUSPARSE() -> PetscCallCUSPARSE()- CHKERRCUSOLVER() -> PetscCallCUSOLVER()- CHKERRCUFFT() -> PetscCallCUFFT()- CHKERRCURAND() -> PetscCallCURAND()- CHKERRHIP() -> PetscCallHIP()- CHKERRHIPBLAS() -> PetscCallHIPBLAS()- CHKERRHIPSOLVER() -> PetscCallHIPSOLVER()- CHKERRQ_CEED() -> PetscCallCEED()- CHKERR_FORTRAN_VOID_FUNCTION() -> PetscCallFortranVoidFunction()- CHKERRMKL() -> PetscCallMKL()- CHKERRMMG() -> PetscCallMMG()- CHKERRMMG_NONSTANDARD() -> PetscCallMMG_NONSTANDARD()- CHKERRCGNS() -> PetscCallCGNS()- CHKERRPTSCOTCH() -> PetscCallPTSCOTCH()- CHKERRSTR() -> PetscCallSTR()- CHKERRTC() -> PetscCallTC()
chkerr and friends wrapped
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