Update source code removing all unneeded /*@C and associated manual stubs and interfaces
LIBBASE is no longer used in make so remove it
Rename rules.doc and rules.utils because GitLab treats the former as a MS Word document.Thanks-to: Jed Brown
Lint apply: sys
non-test and tutorial makefiles only need rules.doc not the full rulesCommit-type: documentation
Only makefiles in the test and tutorial directories need lib/petsc/conf/testCommit-type: housekeeping
Remove now unneeded SOURCE* variables from makefilesCommit-type: configure, housekeeping
Remove empty preprocessor variables
Remove unneeded declarations of LOCDIR from all the makefilesCommit-type:documentation
Make PetscErrorCode a non-discardable enum
Fix -Wunused-parameter for CUDA files
source code format changes due to .clang-format changes
makefile: fix typo - petsckdir.mk -> petscdir.mk
Rework PetscDeviceContext backends and supporting code:- Add PETSC_DEVICE_HOST- Add PetscDeviceAllocate()- Add PetscDeviceMalloc()- Add PetscDeviceDeallocate()- Add PetscDeviceFree()- Add Petsc
Rework PetscDeviceContext backends and supporting code:- Add PETSC_DEVICE_HOST- Add PetscDeviceAllocate()- Add PetscDeviceMalloc()- Add PetscDeviceDeallocate()- Add PetscDeviceFree()- Add PetscDeviceMemcopy()- Add PetscDeviceArraycopy()- Split petscdevice.h into petscdevice_cuda.h and petscdevice_hip.h- Add petscdevice_cupm.h- Extend cupm::Interface and cupm::BlasInterface classes- Add more C++ utility wrappers
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Fix up all manual pages in src/sys directoryCommit-type: documentation/spend 10h
clang-format: convert PETSc sources to comply with clang-format
Add -include */petscdir.mk to makefile that lacked itfor i in `git ls-files | grep makefile | xargs grep -L petscdir.mk`; do echo $i ; str=`echo $i |sed -e 's?[-a-zA-Z0-9]*/?../?g' -e 's?makef
Add -include */petscdir.mk to makefile that lacked itfor i in `git ls-files | grep makefile | xargs grep -L petscdir.mk`; do echo $i ; str=`echo $i |sed -e 's?[-a-zA-Z0-9]*/?../?g' -e 's?makefile?petsckdir.mk?g'` ; cp $i tmp echo "-include $str" > $i cat tmp >> $idoneCommit-type: makefile, housekeeping/spend 15m
remove garbage from makefilesIncluding * unused FLAGS variables * All: lib that did not work * stray blank lines etcCommit-type: housekeeping/spend 1h
Docs: bulk add backticks to .seealso man page fields```pythonimport osimport reimport fileinputdef _process_word(word): comma = "," if word.endswith(",") else "" return "`%s`%s" % (wor
Docs: bulk add backticks to .seealso man page fields```pythonimport osimport reimport fileinputdef _process_word(word): comma = "," if word.endswith(",") else "" return "`%s`%s" % (word.rstrip(","), comma)def _process_stripped_line(line): return " ".join(map(_process_word, line.split()))start_pattern = re.compile(r"^( *\.seealso:? )(.*$)")def process_file(filename_full): with fileinput.FileInput(filename_full, inplace=True) as f: in_block = False for line in f: line_stripped = line.strip() # end ".seealso blocks" on a blank line or C-style comment close line_modified = None if not line_stripped: in_block = False elif line_stripped.endswith("*/"): in_block = False else: match = re.match(start_pattern, line) # not stripped line if match: indent = " " * len(match.group(1)) in_block = True line_modified = match.group( 1) + _process_stripped_line( match.group(2).strip()) elif in_block: line_modified = indent + _process_stripped_line( line_stripped) if line_modified: print(line_modified) # prints to the file else: print(line, end="") # prints to the fileBASE_DIRS = ["src", "include"]EXT = [".c", ".cxx", ".cpp", ".cu", ".h", ".hpp", ".hxx"]EXCLUDE_DIRS = ["tests", "tutorials", "ftn-auto", "ftn-custom", "benchmarks"]def main(): """ Process everything """ for base in BASE_DIRS: for root, dirs, files in os.walk(base): for filename in files: if os.path.splitext(filename)[1] in EXT: filename_full = os.path.join(root, filename) print("FILE ---", filename_full) process_file(filename_full) for exclude_dir in EXCLUDE_DIRS: if exclude_dir in dirs: dirs.remove(exclude_dir)if __name__ == "__main__": main()```
The great renaming:- CHKERRQ() -> PetscCall()- CHKERRV() -> PetscCallVoid()- CHKERRMPI() -> PetscCallMPI()- CHKERRABORT() -> PetscCallAbort()- CHKERRCONTINUE() -> PetscCallContinue()- CHKERRXX
The great renaming:- CHKERRQ() -> PetscCall()- CHKERRV() -> PetscCallVoid()- CHKERRMPI() -> PetscCallMPI()- CHKERRABORT() -> PetscCallAbort()- CHKERRCONTINUE() -> PetscCallContinue()- CHKERRXX() -> PetscCallThrow()- CHKERRCXX() -> PetscCallCXX()- CHKERRCUDA() -> PetscCallCUDA()- CHKERRCUBLAS() -> PetscCallCUBLAS()- CHKERRCUSPARSE() -> PetscCallCUSPARSE()- CHKERRCUSOLVER() -> PetscCallCUSOLVER()- CHKERRCUFFT() -> PetscCallCUFFT()- CHKERRCURAND() -> PetscCallCURAND()- CHKERRHIP() -> PetscCallHIP()- CHKERRHIPBLAS() -> PetscCallHIPBLAS()- CHKERRHIPSOLVER() -> PetscCallHIPSOLVER()- CHKERRQ_CEED() -> PetscCallCEED()- CHKERR_FORTRAN_VOID_FUNCTION() -> PetscCallFortranVoidFunction()- CHKERRMKL() -> PetscCallMKL()- CHKERRMMG() -> PetscCallMMG()- CHKERRMMG_NONSTANDARD() -> PetscCallMMG_NONSTANDARD()- CHKERRCGNS() -> PetscCallCGNS()- CHKERRPTSCOTCH() -> PetscCallPTSCOTCH()- CHKERRSTR() -> PetscCallSTR()- CHKERRTC() -> PetscCallTC()
chkerr and friends wrapped
Added PetscDevice to manage interaction and configuration of available devices.Added PetscDeviceContext class to manage stream interactions for CUDA and HIP devicebackends. The new class is design
Added PetscDevice to manage interaction and configuration of available devices.Added PetscDeviceContext class to manage stream interactions for CUDA and HIP devicebackends. The new class is designed to facilitate a fork-join parallelization model forasynchronous compute.
Merge branch 'rmills/fix-cuda-capitalization' into 'master'Fix occurrences of "Cuda" to "CUDA", to be consistent with usage elsewhere in PETSc.See merge request petsc/petsc!2622
Fix occurrences of "Cuda" to "CUDA", to be consistent with usage elsewhere in PETSc.
Fix a few warnings.Reported-by: Jose E. Roman <jroman@dsic.upv.es>
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